BAC Information

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BAC

Clone NameB6Ng01-074D05
Chromosome7 (Build37)
Map Location 62,026,764 - 62,117,288
singlet/doubletdoublet
Overlap geneLuzp2
Upstream geneLOC668789, Mrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074D05.bB6Ng01-074D05.g
ACCDH891118DH891119
length9801,171
definitionDH891118|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D05, 5' end.DH891119|Mus musculus domesticus DNA, BAC clone: B6Ng01-074D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,116,306 - 62,117,288)(62,026,764 - 62,027,964)
sequence
gaattcactcatttaaagtctatccatgtcttctgaaaccagtagtgccc
gcttcgaacaaactgagtaaactgcttttgactataaagttttttttttc
cattttcaattagccttgagtttttatgaaaggaagcttttctattttgt
caacaaaagcagatcgcctgcacctagcaagaacgtcaggctgagacata
tcctcaatagcagtcagagagatctcagcaaagacatgcagccaggaacg
gaagcccagccgggtcaatctgtgaaatcctgctgctgatctctatagac
acaaacccaaatcctccacggctgaccaattataaacggccccctattca
gttccatttgtactctgagatttgcgtttgaaagtttttaaagactcttc
tctgggaaacttttagagctttcaaggagatgaagaaattgcagcggaaa
tgaggcaatgacccaaaagcagaactgctgagcgacccaatttataagga
aagaaggacgtgcccggataaggtctgtttttctcaaggttgggttaagt
gtgggtagtgtgtatttttgtgtgggaaggaaggcagaactatagagcag
agaatgtccaagaacacagagaacttcccagaagatacctacaaattgga
gtgtgggagaaacagaaagttgcttaggcagatctgaaatcagtagaagg
ggaagaaagaagcatacacaagcatcctaacggaaacattttatttcagt
ggaagtaatcaacagactgagactgaccaattatacagttcaaatttaaa
aatatccccaaatacagggttggagagatggcttatggtcagaattctag
ttgcacctccagcatgaagacgggggatcaagtgagggatgaggttgcta
tcccacagtcacatctcggacccatgattgttcctgtctgaaagattacc
gagatggaaatggagaggagcttcaggaaa
gaattcctggggatagcagagaggtaataaaaaatcataaccacagcaat
aaggctattctgtcctagtgatcattctcattgaatgaagtctcaattca
tagccatatctcttgctagatctgtgagttatgggcatttcctcagtagc
ctgcctgctgtcagtattgttttatcatgggagtgtatagataatgagat
ctttacctaaggtcatcattaaaataaaataacacattggtaatctcata
attcaagttttgggacatctccagtgcttggatgaatgttattaagtttg
tgttagatttcaaaaatacaagcaacagaacatttttgtgttgaagagaa
tgtttaaaataaaatacaaataaaaaaggcttgcaataggcttatcccaa
tacttttgctatagtacaaagggatttgggatttttcttccgttttttct
gttttgttatgcatcaaggctataagcacttagggagatgtggtcagcaa
atagaaataggaaggctccttctgtaaaggaacccagcctaatttacaag
actaatacacacattccaattcagtataataaaggaactagaaaaagaac
atccaatcctgatttgattatttggtgtaaaaatgctttctacaccacta
atgttgaaggatatttatgaaggaactactctcccactgatgactgtcta
ttctgtctgcagagaaaaacagtgcaggattcttgctgctgcatgctgtc
agcagcacgaaccttcttattcgataatagagggttgtttgtggaaaact
taactgcacttcttactaaaaggaagaaaaatgccaacacaaagaagaca
gtttgtaactccagcaatccaggccaatctgagaattatgtttattatat
aaattaacaggtgcattgtgaagttttctcataaagtggtctcaaatgct
cttataaaccatcttgctaacacacaatttgaaattgtctgatatccatg
ttttatccaaatctacaagatattttctttcagtagcatgatacagtttt
aaataaataagtctcttgtatcacatgatgttccaggtgactaacataag
cagatttcttacaaatgaggtgatgtcctgatattttagttaacggaggg
gtcctaaatcatgtgatcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62116306_62117288
seq2: B6Ng01-074D05.b_43_1022 (reverse)

seq1  TTTCCTGAAGCTCCTCTCCATTTCCATCTCTGTAATTCTTTCAGACAGGA  50
      |||||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  TTTCCTGAAGCTCCTCTCCATTTCCATCTCGGTAA-TCTTTCAGACAGGA  49

seq1  ACAATCATGGGTCCGAGATGTGACTGTGGGATAGCAACCTCATCCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATGGGTCCGAGATGTGACTGTGGGATAGCAACCTCATCCCTCAC  99

seq1  TTGATCCCCCGTCTTCATGCTGGAGGTGCAACTAGAAATCTTGACCACTA  150
      ||||||||||||||||||||||||||||||||||||| || |||||| ||
seq2  TTGATCCCCCGTCTTCATGCTGGAGGTGCAACTAGAATTC-TGACCA-TA  147

seq1  AGCCATCTCTCCAACCCTGTATTTGGGGATATTTTTAATATTTG-ACTGT  199
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  AGCCATCTCTCCAACCCTGTATTTGGGGATATTTTTAA-ATTTGAACTGT  196

seq1  ATAATTGGTCAGTCTCAGTCTGTTGATTACTTCCACTGAAATAAAATGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGGTCAGTCTCAGTCTGTTGATTACTTCCACTGAAATAAAATGTT  246

seq1  TCCGTTAGGATGCTTGTGTATGCTTCTTTCTTCCCCTTCTACTGATTTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTTAGGATGCTTGTGTATGCTTCTTTCTTCCCCTTCTACTGATTTCA  296

seq1  GATCTGCCTAAGCAACTTTCTGTTTCTCCCACACTCCAATTTGTAGGTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTAAGCAACTTTCTGTTTCTCCCACACTCCAATTTGTAGGTAT  346

seq1  CTTCTGGGAAGTTCTCTGTGTTCTTGGACATTCTCTGCTCTATAGTTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGAAGTTCTCTGTGTTCTTGGACATTCTCTGCTCTATAGTTCTG  396

seq1  CCTTCCTTCCCACACAAAAATACACACTACCCACACTTAACCCAACCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCCACACAAAAATACACACTACCCACACTTAACCCAACCTTG  446

seq1  AGAAAAACAGACCTTATCCGGGCACGTCCTTCTTTCCTTATAAATTGGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAGACCTTATCCGGGCACGTCCTTCTTTCCTTATAAATTGGGT  496

seq1  CGCTCAGCAGTTCTGCTTTTGGGTCATTGCCTCATTTCCGCTGCAATTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAGCAGTTCTGCTTTTGGGTCATTGCCTCATTTCCGCTGCAATTTC  546

seq1  TTCATCTCCTTGAAAGCTCTAAAAGTTTCCCAGAGAAGAGTCTTTAAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCCTTGAAAGCTCTAAAAGTTTCCCAGAGAAGAGTCTTTAAAAA  596

seq1  CTTTCAAACGCAAATCTCAGAGTACAAATGGAACTGAATAGGGGGCCGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAACGCAAATCTCAGAGTACAAATGGAACTGAATAGGGGGCCGTT  646

seq1  TATAATTGGTCAGCCGTGGAGGATTTGGGTTTGTGTCTATAGAGATCAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGGTCAGCCGTGGAGGATTTGGGTTTGTGTCTATAGAGATCAGC  696

seq1  AGCAGGATTTCACAGATTGACCCGGCTGGGCTTCCGTTCCTGGCTGCATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATTTCACAGATTGACCCGGCTGGGCTTCCGTTCCTGGCTGCATG  746

seq1  TCTTTGCTGAGATCTCTCTGACTGCTATTGAGGATATGTCTCAGCCTGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTGAGATCTCTCTGACTGCTATTGAGGATATGTCTCAGCCTGAC  796

seq1  GTTCTTGCTAGGTGCAGGCGATCTGCTTTTGTTGACAAAATAGAAAAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGCTAGGTGCAGGCGATCTGCTTTTGTTGACAAAATAGAAAAGCT  846

seq1  TCCTTTCATAAAAACTCAAGGCTAATTGAAAATGGAAAAAAAAAACTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCATAAAAACTCAAGGCTAATTGAAAATGGAAAAAAAAAACTTTA  896

seq1  TAGTCAAAAGCAGTTTACTCAGTTTGTTCGAAGCGGGCACTACTGGTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAAAGCAGTTTACTCAGTTTGTTCGAAGCGGGCACTACTGGTTTC  946

seq1  AGAAGACATGGATAGACTTTAAATGAGTGAATTC  983
      ||||||||||||||||||||||||||||||||||
seq2  AGAAGACATGGATAGACTTTAAATGAGTGAATTC  980

seq1: chr7_62026764_62027964
seq2: B6Ng01-074D05.g_66_1236

seq1  GAATTCCTGGGGATAGCAGAGAGGTAATAAAAAATCATAACCACAGCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGGATAGCAGAGAGGTAATAAAAAATCATAACCACAGCAAT  50

seq1  AAGGCTATTCTGTCCTAGTGATCATTCTCATTGAATGAAGTCTCAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTATTCTGTCCTAGTGATCATTCTCATTGAATGAAGTCTCAATTCA  100

seq1  TAGCCATATCTCTTGCTAGATCTGTGAGTTATGGGCATTTCCTCAGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATATCTCTTGCTAGATCTGTGAGTTATGGGCATTTCCTCAGTAGC  150

seq1  CTGCCTGCTGTCAGTATTGTTTTATCATGGGAGTGTATAGATAATGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCTGTCAGTATTGTTTTATCATGGGAGTGTATAGATAATGAGAT  200

seq1  CTTTACCTAAGGTCATCATTAAAATAAAATAACACATTGGTAATCTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTAAGGTCATCATTAAAATAAAATAACACATTGGTAATCTCATA  250

seq1  ATTCAAGTTTTGGGACATCTCCAGTGCTTGGATGAATGTTATTAAGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTTTTGGGACATCTCCAGTGCTTGGATGAATGTTATTAAGTTTG  300

seq1  TGTTAGATTTCAAAAATACAAGCAACAGAACATTTTTGTGTTGAAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGATTTCAAAAATACAAGCAACAGAACATTTTTGTGTTGAAGAGAA  350

seq1  TGTTTAAAATAAAATACAAATAAAAAAGGCTTGCAATAGGCTTATCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAATAAAATACAAATAAAAAAGGCTTGCAATAGGCTTATCCCAA  400

seq1  TACTTTTGCTATAGTACAAAGGGATTTGGGATTTTTCTTCCGTTTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGCTATAGTACAAAGGGATTTGGGATTTTTCTTCCGTTTTTTCT  450

seq1  GTTTTGTTATGCATCAAGGCTATAAGCACTTAGGGAGATGTGGTCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTATGCATCAAGGCTATAAGCACTTAGGGAGATGTGGTCAGCAA  500

seq1  ATAGAAATAGGAAGGCTCCTTCTGTAAAGGAACCCAGCCTAATTTACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATAGGAAGGCTCCTTCTGTAAAGGAACCCAGCCTAATTTACAAG  550

seq1  ACTAATACACACATTCCAATTCAGTATAATAAAGGAACTAGAAAAAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATACACACATTCCAATTCAGTATAATAAAGGAACTAGAAAAAGAAC  600

seq1  ATCCAATCCTGATTTGATTATTTGGTGTAAAAATGCTTTCTACACCACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATCCTGATTTGATTATTTGGTGTAAAAATGCTTTCTACACCACTA  650

seq1  ATGTTGAAGGATATTTATGAAGGAACTACTCTCCCACTGATGACTGTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAAGGATATTTATGAAGGAACTACTCTCCCACTGATGACTGTCTA  700

seq1  TTCTGTCTGCAGAGAAAAACAGTGCAGGATTCTTGCTGCTGCATGCTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTGCAGAGAAAAACAGTGCAGGATTCTTGCTGCTGCATGCTGTC  750

seq1  AGCAGCACGAACCTTCTTATTCGATAATAGAGGGTTGTTTGTGGAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCACGAACCTTCTTATTCGATAATAGAGGGTTGTTTGTGGAAAACT  800

seq1  TAACTGCACTTCTTACTAAAAGGAAGAAAAATGCCAACACAAAGAAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCACTTCTTACTAAAAGGAAGAAAAATGCCAACACAAAGAAGACA  850

seq1  GTTTGTAACTCCAGCAATCCAGGCCAATCTGAGAATTATGTTTATTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAACTCCAGCAATCCAGGCCAATCTGAGAATTATGTTTATTATAT  900

seq1  AAATTAAACAGGTGCATTGTGAAGTTTTCTCATTAAAGTGGTCTTCAAAA  950
      ||||| |||||||||||||||||||||||||| |||||||||||    ||
seq2  AAATT-AACAGGTGCATTGTGAAGTTTTCTCA-TAAAGTGGTCT---CAA  945

seq1  ATGCTCTTATAAACCATCTTGCTAACACACAAATTTGAAATTGTCTGATA  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGCTCTTATAAACCATCTTGCTAACACAC-AATTTGAAATTGTCTGATA  994

seq1  TCCATGTTTTATTCCAAATCTACAAGATA-TTTCTTTCAGTAGCATGATA  1049
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  TCCATGTTTTA-TCCAAATCTACAAGATATTTTCTTTCAGTAGCATGATA  1043

seq1  CCAGGTTTTAAATAAATAAGTCTTCCTTTGTATCACCATGATGTCCCAAG  1099
      |   |||||||||||||||||||    |||||||| |||||||| ||| |
seq2  C--AGTTTTAAATAAATAAGTCT---CTTGTATCA-CATGATGTTCCAGG  1087

seq1  TGACTACACAATAGCAGTATTTTCCCTACAAATGAGTGTGATGTCACTGA  1149
      |||||| |||  ||||| ||||  | |||||||||| |||||||| ||||
seq2  TGACTA-ACATAAGCAG-ATTT--CTTACAAATGAG-GTGATGTC-CTGA  1131

seq1  TATTTTTATGTTTTTAAACGGGAGGTGGGTCCTAAAATCATGCTGGATCA  1199
      ||||||   |||    ||| ||||  ||||||| ||||||||   |||||
seq2  TATTTT--AGTT----AAC-GGAG--GGGTCCT-AAATCATG--TGATCA  1169

seq1  TT  1201
      ||
seq2  TT  1171