BAC Information

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BAC

Clone NameB6Ng01-074H15
Chromosome7 (Build37)
Map Location 77,022,247 - 77,135,229
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC384741, EG665410
Downstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074H15.bB6Ng01-074H15.g
ACCDH891315DH891316
length3521,182
definitionDH891315|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H15, 5' end.DH891316|Mus musculus domesticus DNA, BAC clone: B6Ng01-074H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,022,247 - 77,022,598)(77,134,019 - 77,135,229)
sequence
tagtcaggttctctgtctctccatatctgtgtacacatggtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatg
gtgtgtgtgatcatgcatatatgatcctcttcagacatacatttgcattt
aatatttacctttgagcaacactgttgctattaaagtaatatcaaaatat
ctgaaatgattaaacaactgcattagagaggaatgccaaactgtagacta
tcagactcatctgggtttggttaggagatttttgtgactctttgcatatc
ttagagaaatcattaaatcattttaatgcctctgaagtttgatttcccca
gg
gaattcaacattgaaatgtcctgagattgaagagattctccaagtcttca
gtggcaaagccttccttcactaaatttattttttaaatttaattttataa
ttgatttatcaaataaatttaattgataaatacttctaccatgagcagca
tgcaaatgaatgttatgcatttggtgtgataaatggtatgacttaacatc
tcactgctcaatctatatgaaaaagtattagatattacgaagagacaaaa
tattaaattcattttgtgaacaccacaaaacacttttaccaataatgaag
aatttattttcccctagatattataagtgatggtttccaaagacaagtca
cactctaataatatgaaattttaaaccttaagtattttaacaatgtaata
aatgtctaattgtcatgttgatcatcttataccttgatccaattgaatat
ttgcttattaaattctttttcaaagaaggaggtggtgggattttcaacct
tctcctagaaaattgcaagaggcagaggttaaagaaatgacaactaactt
ttctaaataaaactatcgactacttgttattaaaattgcttgcatattca
accaattaatgttctaatgattgagattcagttttgtatataaaaacatt
gaacttaggaagtatgccatgttatagttatcacatctttgttaactaag
aaacatagtctgtgtcacagaaagggaaaaaaaatctttaaataagactg
tgtacagtactagaaaacaaagccttttgtcaatcttcttcgtgtaccct
cagattatacacctcaccttctcacctaattctatctccttcttagtacc
cagtttactatgcaggtaaatcgagtttcttgagttacagaaaacaaata
ttttgtagacagatattttactgaagataaatcttgccttttcatttccc
cattttaattcaaactaatttctgcctcaaacagtcaattctgccttaaa
aggaattgtttcttggtactaagaaacaaaagcagcagcaacaaacaacc
aaatcagatcaaaacagcaaataccagcatttaatttagcatgcacaatt
gtgtagccagtttgaagataaacacactagtgagtgctaagcacatgtgt
ggcatggctcattatgagtccacaccccatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77022247_77022598
seq2: B6Ng01-074H15.b_49_400

seq1  TAGTCAGGTTCTCTGTCTCTCCATATCTGTGTACACATGGTGTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGGTTCTCTGTCTCTCCATATCTGTGTACACATGGTGTGTGTGTG  50

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATG  100

seq1  GTGTGTGTGATCATGCATATATGATCCTCTTCAGACATACATTTGCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGATCATGCATATATGATCCTCTTCAGACATACATTTGCATTT  150

seq1  AATATTTACCTTTGAGCAACACTGTTGCTATTAAAGTAATATCAAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTACCTTTGAGCAACACTGTTGCTATTAAAGTAATATCAAAATAT  200

seq1  CTGAAATGATTAAACAACTGCATTAGAGAGGAATGCCAAACTGTAGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATGATTAAACAACTGCATTAGAGAGGAATGCCAAACTGTAGACTA  250

seq1  TCAGACTCATCTGGGTTTGGTTAGGAGATTTTTGTGACTCTTTGCATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTCATCTGGGTTTGGTTAGGAGATTTTTGTGACTCTTTGCATATC  300

seq1  TTAGAGAAATCATTAAATCATTTTAATGCCTCTGAAGTTTGATTTCCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAAATCATTAAATCATTTTAATGCCTCTGAAGTTTGATTTCCCCA  350

seq1  GG  352
      ||
seq2  GG  352

seq1: chr7_77134019_77135229
seq2: B6Ng01-074H15.g_67_1248 (reverse)

seq1  GCATGTGGGTGTGGAACTCATTAATGTAGCCATGCACACACACATGTGCT  50
      ||||| |||||||| ||||| ||||| ||||||||   ||||||||||||
seq2  GCATG-GGGTGTGG-ACTCA-TAATG-AGCCATGC---CACACATGTGCT  43

seq1  TAGGCACATCACTAGTGGTTGTTTTAAATC-TCAAACTGGCTTAACACAT  99
      || |||| |||||||||  |||||   ||| |||||||||||  ||||| 
seq2  TA-GCAC-TCACTAGTG--TGTTT---ATCTTCAAACTGGCT--ACACAA  84

seq1  ATGTGCATTGCCTAAATTTAAAATGCTGGGTATTTGCTGTTTTGTTCTGG  149
       |||||||   |||||||  ||||||| |||||||||||||||| ||| |
seq2  TTGTGCAT--GCTAAATT--AAATGCT-GGTATTTGCTGTTTTGATCT-G  128

seq1  TTTTGTTTGTTTGTTTGCTTGCTTGCTTTTGTTTTCTTAGTACCAAGAAA  199
       |||| ||||||| |||| ||| |||||||| ||||||||||||||||||
seq2  ATTTGGTTGTTTG-TTGC-TGC-TGCTTTTG-TTTCTTAGTACCAAGAAA  174

seq1  CAATTCCTTTTTAAGGCAGAATTGACTGTTTGAGGCAGAAAATTAGTTTT  249
      ||||||| |||||||||||||||||||||||||||||| ||||||| |||
seq2  CAATTCC-TTTTAAGGCAGAATTGACTGTTTGAGGCAG-AAATTAG-TTT  221

seq1  GAATTAAAATGGGGAAATGGAAAAGGCAAGATTTATCTTCAGTAAAATAT  299
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAATTAAAATGGGGAAAT-GAAAAGGCAAGATTTATCTTCAGTAAAATAT  270

seq1  CTGTCTACAAAATATTTGTTTTCTGTAACTCAAGAAACTCGATTTACCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTACAAAATATTTGTTTTCTGTAACTCAAGAAACTCGATTTACCTG  320

seq1  CATAGTAAACTGGGTACTAAGAAGGAGATAGAATTAGGTGAGAAGGTGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAAACTGGGTACTAAGAAGGAGATAGAATTAGGTGAGAAGGTGAG  370

seq1  GTGTATAATCTGAGGGTACACGAAGAAGATTGACAAAAGGCTTTGTTTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAATCTGAGGGTACACGAAGAAGATTGACAAAAGGCTTTGTTTTC  420

seq1  TAGTACTGTACACAGTCTTATTTAAAGATTTTTTTTCCCTTTCTGTGACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTGTACACAGTCTTATTTAAAGATTTTTTTTCCCTTTCTGTGACA  470

seq1  CAGACTATGTTTCTTAGTTAACAAAGATGTGATAACTATAACATGGCATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTATGTTTCTTAGTTAACAAAGATGTGATAACTATAACATGGCATA  520

seq1  CTTCCTAAGTTCAATGTTTTTATATACAAAACTGAATCTCAATCATTAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAGTTCAATGTTTTTATATACAAAACTGAATCTCAATCATTAGA  570

seq1  ACATTAATTGGTTGAATATGCAAGCAATTTTAATAACAAGTAGTCGATAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATTGGTTGAATATGCAAGCAATTTTAATAACAAGTAGTCGATAG  620

seq1  TTTTATTTAGAAAAGTTAGTTGTCATTTCTTTAACCTCTGCCTCTTGCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAGAAAAGTTAGTTGTCATTTCTTTAACCTCTGCCTCTTGCAA  670

seq1  TTTTCTAGGAGAAGGTTGAAAATCCCACCACCTCCTTCTTTGAAAAAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGGAGAAGGTTGAAAATCCCACCACCTCCTTCTTTGAAAAAGAA  720

seq1  TTTAATAAGCAAATATTCAATTGGATCAAGGTATAAGATGATCAACATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAGCAAATATTCAATTGGATCAAGGTATAAGATGATCAACATGA  770

seq1  CAATTAGACATTTATTACATTGTTAAAATACTTAAGGTTTAAAATTTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGACATTTATTACATTGTTAAAATACTTAAGGTTTAAAATTTCAT  820

seq1  ATTATTAGAGTGTGACTTGTCTTTGGAAACCATCACTTATAATATCTAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAGAGTGTGACTTGTCTTTGGAAACCATCACTTATAATATCTAGG  870

seq1  GGAAAATAAATTCTTCATTATTGGTAAAAGTGTTTTGTGGTGTTCACAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAAATTCTTCATTATTGGTAAAAGTGTTTTGTGGTGTTCACAAA  920

seq1  ATGAATTTAATATTTTGTCTCTTCGTAATATCTAATACTTTTTCATATAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTAATATTTTGTCTCTTCGTAATATCTAATACTTTTTCATATAG  970

seq1  ATTGAGCAGTGAGATGTTAAGTCATACCATTTATCACACCAAATGCATAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCAGTGAGATGTTAAGTCATACCATTTATCACACCAAATGCATAA  1020

seq1  CATTCATTTGCATGCTGCTCATGGTAGAAGTATTTATCAATTAAATTTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTTGCATGCTGCTCATGGTAGAAGTATTTATCAATTAAATTTAT  1070

seq1  TTGATAAATCAATTATAAAATTAAATTTAAAAAATAAATTTAGTGAAGGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAATCAATTATAAAATTAAATTTAAAAAATAAATTTAGTGAAGGA  1120

seq1  AGGCTTTGCCACTGAAGACTTGGAGAATCTCTTCAATCTCAGGACATTTC  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGCCACTGAAGACTTGGAGAATCTCTTCAATCTCAGGACATTTC  1170

seq1  AATGTTGAATTC  1211
      ||||||||||||
seq2  AATGTTGAATTC  1182