BAC Information

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BAC

Clone NameB6Ng01-074I22
Chromosome7 (Build37)
Map Location 13,238,230 - 13,366,559
singlet/doubletdoublet
Overlap geneVmn2r55, LOC629079, LOC629081, EG232875
Upstream geneLOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065, Zfp606, 2900092C05Rik, EG637908, EG666085
Downstream geneLOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074I22.bB6Ng01-074I22.g
ACCDH891371DH891372
length3671,140
definitionDH891371|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I22, 5' end.DH891372|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,366,193 - 13,366,559)(13,238,230 - 13,239,374)
sequence
agtttactctctgaaaccttaactgttttcagccagtctgttcagtgcct
tcctcccagtctctccctctctgaagccttgcctcagggttgtggggttt
ttagctctgtctgcccacagtaggtctgcgcacttgtttcttgactgttc
atggtcttgagtcttcatttgtgcaggatccccattttaagtctccatct
cctcagtttctctgtctcatctctggacttgtagactagatctttactgt
ctttgggtctcaaggtgcctgagagtttttgtttcttaagcctgtgtatt
tcagtctttgtctccgcctctcaggttctggtggtcctaggttccttttt
gggggtgggtgggggtg
gaattcctaagcttccttcctcattgccttaaatgttttgattataaaat
tgcactactatacctaacctatgtgagtttgtgtgtgtcagtgtttgtgt
gtgcctatatatgtgtactggaagcacatgcatatagaaatcaaagatta
tcattggatattgttccttagtcacttcccacaccttatcttactaataa
aatttattagtaagatctaccatgtggatctcaggagctgatcagggtgt
caaagctaatagtgaatactcaaacccatctcaacaacttcattttttaa
gaagtatttattttactacttgagtgttttgtctatacttatggaaagac
atcatgtgaatgcctggtaggtgtgtaagtcagaagatggcattacatcc
cctgaaactggagttgcacatggttgtgagccatgtgagcactcctaact
gctgtgccattactcttcaaaccctttccattctagttgttgagaaagga
tctctcactgaacctagagatcactgagttgaacacattgagtagcaact
atacatttcaattatgtgaacttcttagtggttcatttttttctacaatg
ctaaaagatattaacaaatgttttagactgagttatacacccaatattca
tttgttaaactccaccagtatcttaaaaccaagctgtatttctcattaag
ttaactggagatgatgtaataaaggttaaatgtcgtcaccagaatatatt
ctatttccaataggactgctattctaatgagaagtgggagttggaggaag
atgtgactgcacatgatttgatctcagaacttgagaggcagagaaaagta
attatctttcagttcatagtcagtctggtcaaaatggtgacttcaatgcc
agcccaggctgtattgtaaaaccttatctaaaagccaaacaacaaattga
aagaggacagatagacagatgcagcatgcacatacgcacacacagacaaa
tcttcagcaaaaaataatcctaatggcagcttgaccttatattttccagc
tttcagcatgtaagtactaagttttgtcaaaaaccaccagatgtggtggc
ctgttccaattcaccctctaggaatgaaacccattaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13366193_13366559
seq2: B6Ng01-074I22.b_50_416 (reverse)

seq1  CACCCCCACCCACCCCCAAAAAGGAACCTAGGACCACCAGAACCTGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCACCCACCCCCAAAAAGGAACCTAGGACCACCAGAACCTGAGAG  50

seq1  GCGGAGACAAAGACTGAAATACACAGGCTTAAGAAACAAAAACTCTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGACAAAGACTGAAATACACAGGCTTAAGAAACAAAAACTCTCAGG  100

seq1  CACCTTGAGACCCAAAGACAGTAAAGATCTAGTCTACAAGTCCAGAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGAGACCCAAAGACAGTAAAGATCTAGTCTACAAGTCCAGAGATG  150

seq1  AGACAGAGAAACTGAGGAGATGGAGACTTAAAATGGGGATCCTGCACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAAACTGAGGAGATGGAGACTTAAAATGGGGATCCTGCACAAA  200

seq1  TGAAGACTCAAGACCATGAACAGTCAAGAAACAAGTGCGCAGACCTACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTCAAGACCATGAACAGTCAAGAAACAAGTGCGCAGACCTACTG  250

seq1  TGGGCAGACAGAGCTAAAAACCCCACAACCCTGAGGCAAGGCTTCAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGACAGAGCTAAAAACCCCACAACCCTGAGGCAAGGCTTCAGAGA  300

seq1  GGGAGAGACTGGGAGGAAGGCACTGAACAGACTGGCTGAAAACAGTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGACTGGGAGGAAGGCACTGAACAGACTGGCTGAAAACAGTTAAG  350

seq1  GTTTCAGAGAGTAAACT  367
      |||||||||||||||||
seq2  GTTTCAGAGAGTAAACT  367

seq1: chr7_13238230_13239374
seq2: B6Ng01-074I22.g_67_1206

seq1  GAATTCCTAAGCTTCCTTCCTCATTGCCTTAAATGTTTTGATTATAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGCTTCCTTCCTCATTGCCTTAAATGTTTTGATTATAAAAT  50

seq1  TGCACTACTATACCTAACCTATGTGAGTTTGTGTGTGTCAGTGTTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTACTATACCTAACCTATGTGAGTTTGTGTGTGTCAGTGTTTGTGT  100

seq1  GTGCCTATATATGTGTACTGGAAGCACATGCATATAGAAATCAAAGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTATATATGTGTACTGGAAGCACATGCATATAGAAATCAAAGATTA  150

seq1  TCATTGGATATTGTTCCTTAGTCACTTCCCACACCTTATCTTACTAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGATATTGTTCCTTAGTCACTTCCCACACCTTATCTTACTAATAA  200

seq1  AATTTATTAGTAAGATCTACCATGTGGATCTCAGGAGCTGATCAGGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTAGTAAGATCTACCATGTGGATCTCAGGAGCTGATCAGGGTGT  250

seq1  CAAAGCTAATAGTGAATACTCAAACCCATCTCAACAACTTCATTTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAATAGTGAATACTCAAACCCATCTCAACAACTTCATTTTTTAA  300

seq1  GAAGTATTTATTTTACTACTTGAGTGTTTTGTCTATACTTATGGAAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATTTATTTTACTACTTGAGTGTTTTGTCTATACTTATGGAAAGAC  350

seq1  ATCATGTGAATGCCTGGTAGGTGTGTAAGTCAGAAGATGGCATTACATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTGAATGCCTGGTAGGTGTGTAAGTCAGAAGATGGCATTACATCC  400

seq1  CCTGAAACTGGAGTTGCACATGGTTGTGAGCCATGTGAGCACTCCTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAACTGGAGTTGCACATGGTTGTGAGCCATGTGAGCACTCCTAACT  450

seq1  GCTGTGCCATTACTCTTCAAACCCTTTCCATTCTAGTTGTTGAGAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCCATTACTCTTCAAACCCTTTCCATTCTAGTTGTTGAGAAAGGA  500

seq1  TCTCTCACTGAACCTAGAGATCACTGAGTTGAACACATTGAGTAGCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACTGAACCTAGAGATCACTGAGTTGAACACATTGAGTAGCAACT  550

seq1  ATACATTTCAATTATGTGAACTTCTTAGTGGTTCATTTTTTTCTACAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTCAATTATGTGAACTTCTTAGTGGTTCATTTTTTTCTACAATG  600

seq1  CTAAAAGATATTAACAAATGTTTTAGACTGAGTTATACACCCAATATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGATATTAACAAATGTTTTAGACTGAGTTATACACCCAATATTCA  650

seq1  TTTGTTAAACTCCACCAGTATCTTAAAACCAAGCTGTATTTCTCATTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAAACTCCACCAGTATCTTAAAACCAAGCTGTATTTCTCATTAAG  700

seq1  TTAACTGGAGATGATGTAATAAAGGTTAAATGTCGTCACCAGAATATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGGAGATGATGTAATAAAGGTTAAATGTCGTCACCAGAATATATT  750

seq1  CTATTTCCAATAGGACTGCTATTCTAATGAGAAGTGGGAGTTGGAGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCAATAGGACTGCTATTCTAATGAGAAGTGGGAGTTGGAGGAAG  800

seq1  ATGTGACTGCACATGATTTGATCTCAGAACTTGAGAGGCAGAGAAAAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTGCACATGATTTGATCTCAGAACTTGAGAGGCAGAGAAAAGTA  850

seq1  ATTATCTTTCAGTTCATAGTCAGTCTGGTCAAAATGGTGACTTCAATGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTTCAGTTCATAGTCAGTCTGGTCAAAATGGTGACTTCAATGCC  900

seq1  AGCCCAGGCTGTATTGTAAAACCTTATCTAAAAGCCAAACAACAAATTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGCCCAGGCTGTATTGTAAAACCTTATCTAAAAGCCAAACAACAAATTG-  949

seq1  AAAGAGGACAGATAGACAGATGCAAGCATGCACATACGCACACACAGACA  1000
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  AAAGAGGACAGATAGACAGATGC-AGCATGCACATACGCACACACAGAC-  997

seq1  AAATCTTCAGCAAAAATTAATCCTAATGGCACCTTGACCTTATA-TTTCC  1049
      |||||||||||||||| |||||||||||||| |||||||||||| |||||
seq2  AAATCTTCAGCAAAAAATAATCCTAATGGCAGCTTGACCTTATATTTTCC  1047

seq1  AGCTTTCAGCATGTAAAGTACTAAGTTCTGTCAAAAACCAACCCAGAATG  1099
      |||||||||||||| |||||||||||| ||||||||||||  |||| |||
seq2  AGCTTTCAGCATGT-AAGTACTAAGTTTTGTCAAAAACCA--CCAG-ATG  1093

seq1  TGGTGGCCTGTTCCAATTCAACCTCTAGG-ATGAAACCCATTAATGC  1145
      |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  TGGTGGCCTGTTCCAATTCACCCTCTAGGAATGAAACCCATTAATGC  1140