BAC Information

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BAC

Clone NameB6Ng01-074J08
Chromosome7 (Build37)
Map Location 123,525,369 - 123,525,651
singlet/doubletsinglet
Overlap genePik3c2a
Upstream geneSox6, LOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7, Rps13
Downstream geneLOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330, Xylt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074J08.bB6Ng01-074J08.g
ACCDH891388DH891389
length1,289737
definitionDH891388|Mus musculus domesticus DNA, BAC clone: B6Ng01-074J08, 5' end.DH891389|Mus musculus domesticus DNA, BAC clone: B6Ng01-074J08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaattctcctcaaactattccacaaaatagaaacagaaggtact
ctacccaattcatttatgaagccacaattactctgataactaaaccacac
aaagacccaacaaagaaggaggacttcagaccaatttttcttatgaatat
tgaagaaaaatactcaataaaattcacgcaaactgaatccaaaagcacat
caaaacgatcacccataatcatcaagtaggcttcatcccaggggtgcagg
gatgctttaatatatggaaatccatcaatgtaatcaactatataaataaa
ctaaaggacaaaaaccacatgataatctcattagatgctgagaatgcatt
tgacaaagtataacaccaattcatgataaaaaactttttaaagatcaaga
attcaaggtccatacctaaacataataaaagcaatacagagcaagccagt
agccaaaatcaaactaaatggtgagaagctgggaggaatcccactaaatc
agggactagacaagtatgcccactttctccctaccaattcaaaaagtact
caaagtcctagccagagaaattacacaacaaaaggtgatcaatgggataa
aaattggaaaggaagaagtcaaaatatcactatttgcagatgaaatgata
gtatatataagtgaccctaaaaattcctggagagaactcctaaacctgat
aaaaatcttcagtgaagtatctggatataaaattaactcaaacaaatcag
tggcctttccctagacaaaggataaagaggctgagaaagaaattagggaa
acaacacccttcacaatagtcacaaataatataaaataccttggcgtgac
tctaactaaggaagtgaaagatctgtatgataagatcttcaagcctctga
agaaagaaatcaaagaagatttcagaagatagaaagatctcccatgctca
tggattgacaggatcaatatagtaaaaattgctatcttgctgaaagcagt
gtacagattcaatgcaatccccgtcaaaattccaattcaattcttcaaca
aattagaaagggcaatttgccgaattcattctggaaaaacaaaaaaccta
ggatagcaaaacttttttctaccataaaaagaacctctgggtgaaatcac
catgactgaccctcaggcttgtacttacaaagcattggtgattaaacctg
ccattgcaactggtacggacggacagttaaatcatggaattgaactgaag
accgaaatgaaaccccacacacttaggctctcacctgga
gaattcccctatactggggcatagagccttcacaggaccaagggcctctc
ttcccattgatgagcaactaggccaatcctctgctacatgaatagctaga
gccacaagttccactatgtgttttctttgattggaggaatagttccaagg
agctctgggggtactggttagttcatattgatgttcctcctatgggactt
cagacttcttcagtccacagggtactttctctggctcattcattggggac
cttgtgctctgtccaatggatgactgtgagcatcaatttgtatatttgcc
aggcactggtagatcctcaaaggagacaactatatcaggctcctgtcagc
aggctcttgttgatatctgcctagtgtctgggtttggtggttgtttatgg
gatagatcaggagtggagtagtctctgaatggtttttcctttaggctctg
tttgaactttgtctctgtaactccttctatgggtatttcattccccattc
taagaaggaatgaattatcaacacttttgttcttccttcttcttgagttt
catatgttttgaaaattgtgtcttgggtattctaagtttctgggctaata
tccacttatcagtaagtgcatatcagtgagtgagtttcttttgtgattgg
gttacctcactcaggatgatatcttccagatccatccatttgccttagaa
tttcataaattcattgtttttaatagctgagtagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_123525369_123525651
seq2: B6Ng01-074J08.g_521_803 (reverse)

seq1  GTACTACTCAGCTATTAAAAAGAATGAATTTAAGAAATTCCTAGGCAAAT  50
      ||||||||||||||||||||| |||||||||| |||||||  ||||||||
seq2  GTACTACTCAGCTATTAAAAACAATGAATTTATGAAATTCTAAGGCAAAT  50

seq1  GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAG  100
      ||||||| ||||| |  |||||||||||||||||||||||||||||||||
seq2  GGATGGATCTGGAAGATATCATCCTGAGTGAGGTAACCCAATCACAAAAG  100

seq1  -AACTCA---AATGAAATGTATTCACTGATAAGTGGATATTAGCCCAGAA  146
       ||||||   | ||| ||| | | ||||||||||||||||||||||||||
seq2  AAACTCACTCACTGATATGCACTTACTGATAAGTGGATATTAGCCCAGAA  150

seq1  ACTTAGTTTAGCGAGATATAAGGTACAAGATGCAAAACACATGAAACTGA  196
      ||||||  || |       |||  ||||  | ||||||| |||||||| |
seq2  ACTTAGAATACC------CAAGACACAATTTTCAAAACATATGAAACTCA  194

seq1  AGAAGAACGAAG-ACCAAAGTGTGCACACTTTGCTCCTTCTTAGAAT-TG  244
      ||||||| |||| || |||||||  | | ||   |||||||||||||  |
seq2  AGAAGAAGGAAGAACAAAAGTGTTGATAATTCATTCCTTCTTAGAATGGG  244

seq1  GAAACAATCACCCATGGAAGGAGTTACAGAGACAAAGTT  283
      |||  ||  |||||| |||||||||||||||||||||||
seq2  GAATGAAATACCCATAGAAGGAGTTACAGAGACAAAGTT  283