BAC Information

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BAC

Clone NameB6Ng01-074K04
Chromosome7 (Build37)
Map Location 116,090,106 - 116,091,023
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5
Downstream geneBC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074K04.bB6Ng01-074K04.g
ACCDH891422DH891423
length1,263905
definitionDH891422|Mus musculus domesticus DNA, BAC clone: B6Ng01-074K04, 5' end.DH891423|Mus musculus domesticus DNA, BAC clone: B6Ng01-074K04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcgcaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggggaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacagccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaacaagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtatatttacacaatg
gagtactactcagctattaaaatgaatttatgaaattcctaggcaaatgg
atggacctggagggcatcatcctgagtgaggtaacacaatcacaaaggaa
ctcacacaatatgtactcactgataagtggatattagcccaaaacttagg
atacccaagatataagatacaagttgcaaaacacatgaaactcaagaata
acgaagaccaaagtgtggacactttgccccttcttagaattgggagcaaa
acacccattgtcttagtcagggtttctattcctgcacaaacatgaccaag
aagcaagttggggacaaaagggtttatacagcttacacttccatgctgtt
gttcatcaccaaaggaagtcagaactggaactcaagcacgtcagggagca
ggaactgatgcagaggtcatggagggatgttcttttctggcttgcctccc
ctggcttgctcagcctgctctcttatagaacccaagactaccagcccaga
gatggtcccacccacaaggggcctttcccccttgatcactaattgagaaa
tgccttagagttggatctcatggaggcatttcctcaactgaagctccttt
ctctgtgataaccccagctgtgtcaggttgaacacaaagctagcagttca
cccatggagggtttacagagacaagtttggagctgtgacgaagaaatgga
acatctaaagaactgcattcagggaatccatcgataataaacttcagccg
tgaccatggctatcatgaccagattgctgaagcaccggaaattaactctc
tctctcttgtgtg
gaattccaggatagccaaggcaacacagagaaaccctatcttgaagaaca
aaacaaaggaaaaagtgatagacactttcatttttcaaggtccttgggca
tccctacctaggaaagcctcaccatgcacttttccatctgggaattgagt
ctgctactgtcttatctccttttcttacctctgcatccgctccagttccg
gctttatccctgccactcatcatttagctgccggagaatagcttgtgact
tcctagcgccttattaaggcaaagcaatctatttcctgtcttgtggcagc
ttttctatacagactgtgctgtagtcggcaggcccatcatttcccctgga
tgaagggttagccaagctgtctgacataaaacaaccaccacttcataatg
cttgtgaggcaaggcaagaaagataccctgaataaggatgactggtcttt
atgagatccagtgctcaactgggaagactaggcggctgggatgattttaa
gaactgggggttgtaatctcgtgaaagccttttcactcttaggtctggtg
cctagctgtagtgggttaaaggctgggctcagctggaactgtcaagtgaa
gcatatgtatattccctctccttatccttgcatttctaggcatcctcaag
catagaggtctcagtggttttgcttccacatggtagcttaaggctccagt
cagcaaacaaacactaggaataccaaagggccttattttccttcactcag
agtcatgtggcctacagctcaaggggagttcccatagaacttcctcctca
aaaagaaatagccaagttttcaagtatacttcaaaactgccacattccct
tcttgcaatgctgacctgataaaagcaaagaaagatacgtctcctgggct
tgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116090106_116091023
seq2: B6Ng01-074K04.g_66_970

seq1  GAATTCCAGGATAGCCAAGGCAACACAGAGAAACCCTATCTTGAAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATAGCCAAGGCAACACAGAGAAACCCTATCTTGAAGAACA  50

seq1  AAACAAAGGAAAAAGTGATAGACACTTTCATTTTTCAAGGTCCTTGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGGAAAAAGTGATAGACACTTTCATTTTTCAAGGTCCTTGGGCA  100

seq1  TCCCTACCTAGGAAAGCCTCACCATGCACTTTTCCATCTGGGAATTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACCTAGGAAAGCCTCACCATGCACTTTTCCATCTGGGAATTGAGT  150

seq1  CTGCTACTGTCTTATCTCCTTTTCTTACCTCTGCATCCGCTCCAGTTCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTACTGTCTTATCTCCTTTTCTTACCTCTGCATCCGCTCCAGTTCCG  200

seq1  GCTTTATCCCTGCCACTCATCATTTAGCTGCCGGAGAATAGCTTGTGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATCCCTGCCACTCATCATTTAGCTGCCGGAGAATAGCTTGTGACT  250

seq1  TCCTAGCGCCTTATTAAGGCAAAGCAATCTATTTCCTGTCTTGTGGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCGCCTTATTAAGGCAAAGCAATCTATTTCCTGTCTTGTGGCAGC  300

seq1  TTTTCTATACAGACTGTGCTGTAGTCGGCAGGCCCATCATTTCCCCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTATACAGACTGTGCTGTAGTCGGCAGGCCCATCATTTCCCCTGGA  350

seq1  TGAAGGGTTAGCCAAGCTGTCTGACATAAAACAACCACCACTTCATAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGTTAGCCAAGCTGTCTGACATAAAACAACCACCACTTCATAATG  400

seq1  CTTGTGAGGCAAGGCAAGAAAGATACCCTGAATAAGGATGACTGGTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAGGCAAGGCAAGAAAGATACCCTGAATAAGGATGACTGGTCTTT  450

seq1  ATGAGATCCAGTGCTCAACTGGGAAGACTAGGCGGCTGGGATGATTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATCCAGTGCTCAACTGGGAAGACTAGGCGGCTGGGATGATTTTAA  500

seq1  GAACTGGGGGTTGTAATCTCGTGAAAGCCTTTTCACTCTTAGGTCTGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGGGGTTGTAATCTCGTGAAAGCCTTTTCACTCTTAGGTCTGGTG  550

seq1  CCTAGCTGTAGTGGGTTAAAGGCTGGGCTCAGCTGGAACTGTCAAGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGTAGTGGGTTAAAGGCTGGGCTCAGCTGGAACTGTCAAGTGAA  600

seq1  GCATATGTATATTCCCTCTCCTTATCCTTGCATTTCTAGGCATCCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCATATGTATATTCCCTCTCCTTATCCTTGCATTTCTAGGCATCCTC-AA  649

seq1  GCATAGAGGTCTCAGTGGTTTTGCTTCCAACATGGTAGCTTAAGGCTCCA  700
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCATAGAGGTCTCAGTGGTTTTGCTTCC-ACATGGTAGCTTAAGGCTCCA  698

seq1  GTCAGCAAACAAACACTAGGAATACCAAAGGGCCTTATTTTCCTTCACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTCAGCAAACAAACACTAGGAATACCAAAGGGCCTTATTTTCCTTCA-CT  747

seq1  CAAGAGTCATGTGGCCTACAGGCTCAAGGGGAGTTCACATAGAACTTCCT  800
      | |||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  C-AGAGTCATGTGGCCTACA-GCTCAAGGGGAGTTCCCATAGAACTTCCT  795

seq1  -CTCAAAAAGAGAAATAGCCAAGGTTTTACAAGTATACTTCAAAACTGCC  849
       |||||||  |||||||||||||  ||| |||||||||||||||||||||
seq2  CCTCAAAA--AGAAATAGCCAAG--TTTTCAAGTATACTTCAAAACTGCC  841

seq1  ACATTCCCTTCCTGCAGAATGCTGACCCTGATAAAAGCCAAAGAAAGATA  899
      ||||||||||| |||  |||||||| ||||||||||| ||||||||||||
seq2  ACATTCCCTTCTTGC--AATGCTGA-CCTGATAAAAG-CAAAGAAAGATA  887

seq1  CGTTCTCTGGGCCTTGCTA  918
      || ||||  || |||||||
seq2  CG-TCTCCTGGGCTTGCTA  905