BAC Information

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BAC

Clone NameB6Ng01-074L16
Chromosome7 (Build37)
Map Location 57,537,177 - 57,660,892
singlet/doubletdoublet
Overlap geneNell1
Upstream gene5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5
Downstream gene4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074L16.bB6Ng01-074L16.g
ACCDH891492DH891493
length6301,142
definitionDH891492|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L16, 5' end.DH891493|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,660,260 - 57,660,892)(57,537,177 - 57,538,324)
sequence
gaattctaggtttagagttgagttcaaaaacaaagtggagaacagttaag
gaggacactccacaagatctctggtctacacacacacacacacacacaca
cacacacacacacacacacacacacacacacacacacacagagagagaga
gagagagagagagagagagagagagagagggggggggggatggggcagag
aggacataaattgaagtgtataaaagtcagtcttgtttgtggcatatacc
tagtgaatgatctctaaagctttctgatttgccctccaggcagcttctga
ctctctttattaatggcatctttcttgggggagaggtgcagggggctgcc
tgtttgcaaaactccttcatcacatttcctcttttccaaaacactcgagg
agctagtcctctgagcattgtggactgtcttcagcccagtacatgaaagg
tctcagcataaccagtcttactcaattagagacagagagactcatcccag
actggggattttagctggaatgataatttataatgcaagactttcacaaa
tatggtggaaatgtgaagtgtccaagcagtcatgatctgagacacctacc
agacttagcatctgtctcataatctcctct
gaattctctaagccctatgctactcagacatgcagaagattctccatctt
agttttcagaactggattacctcctacctagtcctgacattactcatctg
atatttggggagggcggggaatcctatgaggtctggttgcttatggtcct
cctttggatctgaaatcaacctcttccctttgaatctagtagaggtgtgg
gaagaggaaacaatgagggtagtttgagaaaacaatgaggaaaatctgtt
cctgcaccgctcttctgttagttatgcataattcttgtcattttctgagt
tcgtacctaggaatttccatccagtgtcatctagtggagaaccttagagg
tgagtgtcagagactcccagggatgcattatttgccatagcttagagaca
actagagatgcataaactgcaataaatgaatgaaaatgacctggattata
aaaccacaatgagcaagattagcttgaaattaaaacaaaacagtacacac
actgtccagaaatcttgaaggatccatcccagattctcagaggaagacaa
agcacaaaaggcattgagctttcttacctttgtcccgtggcagcagagct
ctggtgtattaaagactcctgatcttcagaagttataaaactgccgagga
gatgtcaaaactcctgaccaatcaatggaagataataaaaccttctgtca
gctgtaatacaattcaccaggtttcatttttgccttgtgagactggggca
ggcacagtcctcatcctgaaaactccgttcattggattttttagtgtttt
gaggatctggttggctggggatttctccccctgtgatagcattttcactg
agtgggttttaggtagtttctgatacctttgtgtgaattataaccagtgt
ctggtataactgccatgctagctgtcctgttggcacccttactactgaat
ttggaggctgagcagcttttcatgaaccggaatgagtagctgtttgtaag
atgagaataatatgatgtcctttgcatcctgaaggatgagaactgattga
aaatgacctttagttgacctgagttccaggatcgtttgtattttgttgca
ctaatgggagcctagaatctgtgaaaccatggcaaccctgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_57660260_57660892
seq2: B6Ng01-074L16.b_49_678 (reverse)

seq1  AGAGGAGATTATGGGACAGAATGCTAAGTCTGGTAGGTGTCTCAGATCAT  50
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  AGAGGAGATTATGAGACAG-ATGCTAAGTCTGGTAGGTGTCTCAGATCAT  49

seq1  GACTGCTTGGGACACTTCACATTTCCACCATATTTTGTGAAAGTCTTGCA  100
      |||||||| ||||||||||||||||||||||| |||||||||||||||||
seq2  GACTGCTT-GGACACTTCACATTTCCACCATA-TTTGTGAAAGTCTTGCA  97

seq1  TTTTAAATTATCATTCCAGCTAAAATCCCCAGTCTGGGATGAGTCTCTCT  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATTATCATTCCAGCTAAAATCCCCAGTCTGGGATGAGTCTCTCT  147

seq1  GTCTCTAATTGAGTAAGACTGGTTCTGCTGAGACCTTTCATGTACTGGGC  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCTCTAATTGAGTAAGACTGGTTATGCTGAGACCTTTCATGTACTGGGC  197

seq1  TGAAGACAGTCCACAATGCTCAGAGGACTAGCTCCTCGAGTGTTTTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACAGTCCACAATGCTCAGAGGACTAGCTCCTCGAGTGTTTTGGAA  247

seq1  AAGAGGAAATGTGATGAAGGAGTTTTGCAAACAGGCAGCCCCCTGCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAATGTGATGAAGGAGTTTTGCAAACAGGCAGCCCCCTGCACCT  297

seq1  CTCCCCCAAGAAAGATGCCATTAATAAAGAGAGTCAGAAGCTGCCTGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCAAGAAAGATGCCATTAATAAAGAGAGTCAGAAGCTGCCTGGAG  347

seq1  GGCAAATCAGAAAGCTTTAGAGATCATTCACTAGGTATATGCCACAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATCAGAAAGCTTTAGAGATCATTCACTAGGTATATGCCACAAACA  397

seq1  AGACTGACTTTTATACACTTCAATTTATGTCCTCTCTGCCCCATCCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGACTTTTATACACTTCAATTTATGTCCTCTCTGCCCCATCCCCCC  447

seq1  CCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGT  497

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  547

seq1  GTGTGTAGACCAGAGATCTTGTGGAGTGTCCTCCTTAACTGTTCTCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGACCAGAGATCTTGTGGAGTGTCCTCCTTAACTGTTCTCCACT  597

seq1  TTGTTTTTGAACTCAACTCTAAACCTAGAATTC  633
      |||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGAACTCAACTCTAAACCTAGAATTC  630

seq1: chr7_57537177_57538324
seq2: B6Ng01-074L16.g_69_1210

seq1  GAATTCTCTAAGCCCTATGCTACTCAGACATGCAGAAGATTCTCCATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAGCCCTATGCTACTCAGACATGCAGAAGATTCTCCATCTT  50

seq1  AGTTTTCAGAACTGGATTACCTCCTACCTAGTCCTGACATTACTCATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAGAACTGGATTACCTCCTACCTAGTCCTGACATTACTCATCTG  100

seq1  ATATTTGGGGAGGGCGGGGAATCCTATGAGGTCTGGTTGCTTATGGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGGGAGGGCGGGGAATCCTATGAGGTCTGGTTGCTTATGGTCCT  150

seq1  CCTTTGGATCTGAAATCAACCTCTTCCCTTTGAATCTAGTAGAGGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGATCTGAAATCAACCTCTTCCCTTTGAATCTAGTAGAGGTGTGG  200

seq1  GAAGAGGAAACAATGAGGGTAGTTTGAGAAAACAATGAGGAAAATCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAAACAATGAGGGTAGTTTGAGAAAACAATGAGGAAAATCTGTT  250

seq1  CCTGCACCGCTCTTCTGTTAGTTATGCATAATTCTTGTCATTTTCTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACCGCTCTTCTGTTAGTTATGCATAATTCTTGTCATTTTCTGAGT  300

seq1  TCGTACCTAGGAATTTCCATCCAGTGTCATCTAGTGGAGAACCTTAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTACCTAGGAATTTCCATCCAGTGTCATCTAGTGGAGAACCTTAGAGG  350

seq1  TGAGTGTCAGAGACTCCCAGGGATGCATTATTTGCCATAGCTTAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCAGAGACTCCCAGGGATGCATTATTTGCCATAGCTTAGAGACA  400

seq1  ACTAGAGATGCATAAACTGCAATAAATGAATGAAAATGACCTGGATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGATGCATAAACTGCAATAAATGAATGAAAATGACCTGGATTATA  450

seq1  AAACCACAATGAGCAAGATTAGCTTGAAATTAAAACAAAACAGTACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAATGAGCAAGATTAGCTTGAAATTAAAACAAAACAGTACACAC  500

seq1  ACTGTCCAGAAATCTTGAAGGATCCATCCCAGATTCTCAGAGGAAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCAGAAATCTTGAAGGATCCATCCCAGATTCTCAGAGGAAGACAA  550

seq1  AGCACAAAAGGCATTGAGCTTTCTTACCTTTGTCCCGTGGCAGCAGAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAAAGGCATTGAGCTTTCTTACCTTTGTCCCGTGGCAGCAGAGCT  600

seq1  CTGGTGTATTAAAGACTCCTGATCTTCAGAAGTTATAAAACTGCCGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTATTAAAGACTCCTGATCTTCAGAAGTTATAAAACTGCCGAGGA  650

seq1  GATGTCAAAACTCCTGACCAATCAATGGAAGATAATAAAACCTTCTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAAAACTCCTGACCAATCAATGGAAGATAATAAAACCTTCTGTCA  700

seq1  GCTGTAATACAATTCACCAGGTTTCATTTTTGCCTTGTGAGACTGGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAATACAATTCACCAGGTTTCATTTTTGCCTTGTGAGACTGGGGCA  750

seq1  GGCACAGTCCTCATCCTGAAAACTCCGTTCATTGGATTTTTTAGTGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTCCTCATCCTGAAAACTCCGTTCATTGGATTTTTTAGTGTTTT  800

seq1  GAGGATCTGGTTGGCTGGGGATTTCTCCCCCTGTGATAGCATTTTCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCTGGTTGGCTGGGGATTTCTCCCCCTGTGATAGCATTTTCACTG  850

seq1  AGTGGGTTTTAGGTAGTTTCTGATACCTTTGTGTGAATTATAACCAGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTTTTAGGTAGTTTCTGATACCTTTGTGTGAATTATAACCAGTGT  900

seq1  CTGGTATAACTGCCATGCTAGCTGTCCTGTTGGCACCCTTACTACTGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATAACTGCCATGCTAGCTGTCCTGTTGGCACCCTTACTACTGAAT  950

seq1  TTGGAGGCTGAGCAGCTTTTCATGAACCGGAATGAGTAGCTGTTTGTAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGGAGGCTGAGCAGCTTTTCATGAACCGGAATGAGTAGCTGTTTGTAA-  999

seq1  GATGAGGAATAATATGATGTCCTTTGCATCCTGAAGGATGAGAACTGATT  1050
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGA-GAATAATATGATGTCCTTTGCATCCTGAAGGATGAGAACTGATT  1048

seq1  GAAAAATGACCCTTTAGTTGACCTGAGTTTCCCAGGATCCGTTTGTA-TT  1099
      | ||||||| |||||||||||||||||||  ||||||| |||||||| ||
seq2  G-AAAATGA-CCTTTAGTTGACCTGAGTT--CCAGGAT-CGTTTGTATTT  1093

seq1  TGTTGCACTTATGGGAGCTTAGAATCTGTGAGCACATGGCAACCCTGAC  1148
      ||||||||| |||||||| ||||||||||||   |||||||||||||||
seq2  TGTTGCACTAATGGGAGCCTAGAATCTGTGAAACCATGGCAACCCTGAC  1142