BAC Information

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BAC

Clone NameB6Ng01-075G18
Chromosome7 (Build37)
Map Location 60,990,306 - 61,033,928
singlet/doubletdoublet
Overlap genenone
Upstream geneEG620782, LOC100040692, Gm1865, LOC100040718
Downstream geneLOC668789, Mrps33p, LOC622146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075G18.bB6Ng01-075G18.g
ACCDH891989DH891990
length1,1961,136
definitionDH891989|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G18, 5' end.DH891990|Mus musculus domesticus DNA, BAC clone: B6Ng01-075G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,990,306 - 60,991,516)(61,032,779 - 61,033,928)
sequence
gaattctttatggtttattaaccattgaaaataccagtttttatttttaa
agtgctttgcaataaatgatacgaatacattttctaatcataaaaaagaa
attcatgcaaaagatccttttttgttgatattttatcaggggttctctgc
ttctgcaggtccattctatacttgcaatatatgggatgcaacgtatgaga
aaacacctgaatgttaatgccagccatgatctactggacccagtgtgtct
ttatcattatcatacctgtaaagctagctaattctgtctccctttagcag
ccagcctgcttattgctcaacagtgactctccaatgtgccctagttcttt
cccacaaagtcatgtgatttcagacatctctgaaaccaagcagtagttct
gtctccaaaatagtagctcattatgcagttttcattattcttgtctcact
aaattgatttgtaattcctgtttgacatatgtcaatcatgtagaaaataa
taaagcaagcatttacacacagcactgcaggtctcttttgtccttttgat
ctttccaaatacagtcagtatctttaagatggtacacaatgttgtatccc
acgacaatgaaacaactcttgagaaaatagcatttatgttcctcaaactc
agaacatacaggaactcatgacctttacagaacatactcatttttcttag
gatcaaaataattgggcttatgattagtctttgaaatgcacactattgta
gtgttaaaaacttatgagtttcaaagattaatattagaaattgagtgctt
aaaatagactttgagaagttgattgataagtgagaaatttgcctagatag
gcagatatagagacatttatttatttatttatttattatttatttattta
tttattggaaatgtcaattattactttcagccacagcctgaaagtataag
atcagtacagtattcttgctatgcatgtgtgtatttccatgtgtgtgtgt
gtgtactttcttagtctcctattcccaaatccactaatataaacatttca
tcaaaatgaaacatatacatgggcttttttaatttatatatgatgacaaa
tagctataacactgagtgatgaaacattatatgaacggaaattcaacaga
ttaggaactcaataatacattcttttaaaatctggaaataaaatat
gaattcaatttaaagttacgtactgattgtccagcatgggccacagccat
cccttaagtgcatgagaatggcttcgttgaaatttgaacttaccattgtc
tctataactggctttaaagtaattaatctcatccctgtgcacatccactt
ccctacctataatttgtggcaacatcaggaaccacctcaaaggataacaa
tgagtagtgacttgactgagcaaaattagtgaataacttattttatcttt
tgcccagaaagagaaaatgaatactgcagttaacggataattagaaataa
aactaggtagcacttgccaattaactcagcaagttcctgcagaaaatatg
cttctttcgcatgactaagaatcacttgtgtctgtgagagaattagatct
tgctcactacggtaaacagcatgtgtgcctgatatcaaggccaaatgtct
tatgtcaagacaatattagtacgtggttcggccacatatgcacatcttgg
gtactgtagtcttgctattacacaggctgtggtgatgcagcttgtcaaac
cggccctcttcagtgattcccagtgattttaaatcacctttgcactaatt
tagtggtgtgtcactgagaatccatgtaaattatttcagagtatttaata
tatcttacgttttttattctttagagaacagcacatgagccggagaatat
gtttcatgcaacttgactgatgaaagcccctgggtgtgagataacctact
cactaaataatacatttatacataataaacagtgtgacgtttttgccaca
gactatcaatgtcccctgattgagataaaattctctcttttaattaatgt
cagtgagctcaaagagttttaagctctgttcctccaagactgaagtgatt
tttagccttttgtattcactggaggcttcactttgagatggtaatccact
gccctctcccagagaactgacctgatatgcctaatacaagagcttcatcc
gactctttcagatttaccccaggagatgctcattcttccaaagggaaggc
tatagtttggaaacacctcctcagatcaaatataaacttctaaaggaaga
ataaaaattgctatattctaatcatgaaagcttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60990306_60991516
seq2: B6Ng01-075G18.b_46_1241

seq1  GAATTCTTTATGGTTTATTAACCATTGAAAATACCAGTTTTTATTTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATGGTTTATTAACCATTGAAAATACCAGTTTTTATTTTTAA  50

seq1  AGTGCTTTGCAATAAATGATACGAATACATTTTCTAATCATAAAAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTGCAATAAATGATACGAATACATTTTCTAATCATAAAAAAGAA  100

seq1  ATTCATGCAAAAGATCCTTTTTTGTTGATATTTTATCAGGGGTTCTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCAAAAGATCCTTTTTTGTTGATATTTTATCAGGGGTTCTCTGC  150

seq1  TTCTGCAGGTCCATTCTATACTTGCAATATATGGGATGCAACGTATGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGGTCCATTCTATACTTGCAATATATGGGATGCAACGTATGAGA  200

seq1  AAACACCTGAATGTTAATGCCAGCCATGATCTACTGGACCCAGTGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTGAATGTTAATGCCAGCCATGATCTACTGGACCCAGTGTGTCT  250

seq1  TTATCATTATCATACCTGTAAAGCTAGCTAATTCTGTCTCCCTTTAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTATCATACCTGTAAAGCTAGCTAATTCTGTCTCCCTTTAGCAG  300

seq1  CCAGCCTGCTTATTGCTCAACAGTGACTCTCCAATGTGCCCTAGTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGCTTATTGCTCAACAGTGACTCTCCAATGTGCCCTAGTTCTTT  350

seq1  CCCACAAAGTCATGTGATTTCAGACATCTCTGAAACCAAGCAGTAGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAAGTCATGTGATTTCAGACATCTCTGAAACCAAGCAGTAGTTCT  400

seq1  GTCTCCAAAATAGTAGCTCATTATGCAGTTTTCATTATTCTTGTCTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAAAATAGTAGCTCATTATGCAGTTTTCATTATTCTTGTCTCACT  450

seq1  AAATTGATTTGTAATTCCTGTTTGACATATGTCAATCATGTAGAAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATTTGTAATTCCTGTTTGACATATGTCAATCATGTAGAAAATAA  500

seq1  TAAAGCAAGCATTTACACACAGCACTGCAGGTCTCTTTTGTCCTTTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAGCATTTACACACAGCACTGCAGGTCTCTTTTGTCCTTTTGAT  550

seq1  CTTTCCAAATACAGTCAGTATCTTTAAGATGGTACACAATGTTGTATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAAATACAGTCAGTATCTTTAAGATGGTACACAATGTTGTATCCC  600

seq1  ACGACAATGAAACAACTCTTGAGAAAATAGCATTTATGTTCCTCAAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACAATGAAACAACTCTTGAGAAAATAGCATTTATGTTCCTCAAACTC  650

seq1  AGAACATACAGGAACTCATGACCTTTACAGAACATACTCATTTTTCTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATACAGGAACTCATGACCTTTACAGAACATACTCATTTTTCTTAG  700

seq1  GATCAAAATAATTGGGCTTATGATTAGTCTTTGAAATGCACACTATTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAATAATTGGGCTTATGATTAGTCTTTGAAATGCACACTATTGTA  750

seq1  GTGTTAAAAACTTATGAGTTTCAAAGATTAATATTAGAAATTGAGTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAAAAACTTATGAGTTTCAAAGATTAATATTAGAAATTGAGTGCTT  800

seq1  AAAATAGACTTTGAGAAGTTGATTGATAAGTGAGAAATTTGCCTAGATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGACTTTGAGAAGTTGATTGATAAGTGAGAAATTTGCCTAGATAG  850

seq1  GCAGATATAGAGACATTTATTTATTTATTTATTTATTTATTTATTTATTT  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCAGATATAGAGACATTTATTTATTTATTTATTTA-TTATTTATTTATTT  899

seq1  ATTTATTTGGAAATGTCAATTATTAC-TTCAGCCACAGCCTGAAAGTATA  949
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTTA-TTGGAAATGTCAATTATTACTTTCAGCCACAGCCTGAAAGTATA  948

seq1  AGATCAGTACAGTATTCTTGCTATTGCATGTGTGTATTTCCATGTGTGTG  999
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGATCAGTACAGTATTCTTGCTA-TGCATGTGTGTATTTCCATGTGTGTG  997

seq1  TGTGTGTACTTTCTTAGTCTCCTATTTCCCAATTCCACTAATATTAAACA  1049
      |||||||||||||||||||||||| ||||||| |||||||||| ||||||
seq2  TGTGTGTACTTTCTTAGTCTCCTA-TTCCCAAATCCACTAATA-TAAACA  1045

seq1  TTTCATCAAATTGAAAACATATACATGGCTTTTTTTAAATTTATATATGA  1099
      |||||||||| || ||||||||||||||  |||||| |||||||||||||
seq2  TTTCATCAAAATG-AAACATATACATGGGCTTTTTT-AATTTATATATGA  1093

seq1  TGACAAAATAGCTAT-ACACTGAGTGATGAAACATTATATGAACAGAAAA  1148
      |||| |||||||||| |||||||||||||||||||||||||||| |||| 
seq2  TGAC-AAATAGCTATAACACTGAGTGATGAAACATTATATGAACGGAAAT  1142

seq1  TCAAACAGGATTAGGAACTCAAATAAATACACATTCTTTTTTTAAAATTC  1198
      || |||| ||||||||||||||   ||||||     || |||||||||  
seq2  TC-AACA-GATTAGGAACTCAA--TAATACA-----TTCTTTTAAAATCT  1183

seq1  TGAAATAAAATAT  1211
       ||||||||||||
seq2  GGAAATAAAATAT  1196

seq1: chr7_61032779_61033928
seq2: B6Ng01-075G18.g_67_1202 (reverse)

seq1  TTGAAGCTTTCATTGGGAATCTAAGAATTTCTAGGCAATTTTATCTTTCC  50
      |||||||||||||   ||   | ||||  | |||  | ||||||  ||||
seq2  TTGAAGCTTTCAT---GA---TTAGAA--TATAGCAATTTTTATTCTTCC  42

seq1  TTTTTAGAAAATTTATATGTGATCTGAGGA-GTGTTTCTCAAACTATAGC  99
        ||||| || ||||||| ||||||||||| ||||||| |||||||||||
seq2  --TTTAG-AAGTTTATATTTGATCTGAGGAGGTGTTTC-CAAACTATAGC  88

seq1  CTTCCCTTTGGAAGAATGAGCATCTCCTGGGGTAAATCTGAAAGAGTCGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTTGGAAGAATGAGCATCTCCTGGGGTAAATCTGAAAGAGTCGG  138

seq1  ATTGAAGCTCTTGTATTAGGCATATCAGGTCAGTTCTCTGGGGAGAGGGC  199
      | ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  A-TGAAGCTCTTGTATTAGGCATATCAGGTCAGTTCTCT-GGGAGAGGGC  186

seq1  AGTGGATTACCATCTCAAAGTGAAGCCTCCAGTGAATACAAAAGGCTAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATTACCATCTCAAAGTGAAGCCTCCAGTGAATACAAAAGGCTAAA  236

seq1  AATCACTTCAGTCTTGGAGGAAACAGAGCTTAAAACTCTTTGAGCTCACT  299
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATCACTTCAGTCTTGGAGG-AACAGAGCTTAAAACTCTTTGAGCTCACT  285

seq1  GACATTAATTAAAAGAGAGAATTTTATCTCAATCAGGGGACATTGATAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTAATTAAAAGAGAGAATTTTATCTCAATCAGGGGACATTGATAGT  335

seq1  CTGTGGCAAAAACGTCACACTGTTTATTATGTATAAATGTATTATTTAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCAAAAACGTCACACTGTTTATTATGTATAAATGTATTATTTAGT  385

seq1  GAGTAGGTTATCTCACACCCAGGGGCTTTCATCAGTCAAGTTGCATGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGTTATCTCACACCCAGGGGCTTTCATCAGTCAAGTTGCATGAAA  435

seq1  CATATTCTCCGGCTCATGTGCTGTTCTCTAAAGAATAAAAAACGTAAGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTCCGGCTCATGTGCTGTTCTCTAAAGAATAAAAAACGTAAGAT  485

seq1  ATATTAAATACTCTGAAATAATTTACATGGATTCTCAGTGACACACCACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATACTCTGAAATAATTTACATGGATTCTCAGTGACACACCACT  535

seq1  AAATTAGTGCAAAGGTGATTTAAAATCACTGGGAATCACTGAAGAGGGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTGCAAAGGTGATTTAAAATCACTGGGAATCACTGAAGAGGGCC  585

seq1  GGTTTGACAAGCTGCATCACCACAGCCTGTGTAATAGCAAGACTACAGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGACAAGCTGCATCACCACAGCCTGTGTAATAGCAAGACTACAGTA  635

seq1  CCCAAGATGTGCATATGTGGCCGAACCACGTACTAATATTGTCTTGACAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGATGTGCATATGTGGCCGAACCACGTACTAATATTGTCTTGACAT  685

seq1  AAGACATTTGGCCTTGATATCAGGCACACATGCTGTTTACCGTAGTGAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTGGCCTTGATATCAGGCACACATGCTGTTTACCGTAGTGAGC  735

seq1  AAGATCTAATTCTCTCACAGACACAAGTGATTCTTAGTCATGCGAAAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTAATTCTCTCACAGACACAAGTGATTCTTAGTCATGCGAAAGAA  785

seq1  GCATATTTTCTGCAGGAACTTGCTGAGTTAATTGGCAAGTGCTACCTAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTTCTGCAGGAACTTGCTGAGTTAATTGGCAAGTGCTACCTAGT  835

seq1  TTTATTTCTAATTATCCGTTAACTGCAGTATTCATTTTCTCTTTCTGGGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTAATTATCCGTTAACTGCAGTATTCATTTTCTCTTTCTGGGC  885

seq1  AAAAGATAAAATAAGTTATTCACTAATTTTGCTCAGTCAAGTCACTACTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATAAAATAAGTTATTCACTAATTTTGCTCAGTCAAGTCACTACTC  935

seq1  ATTGTTATCCTTTGAGGTGGTTCCTGATGTTGCCACAAATTATAGGTAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTATCCTTTGAGGTGGTTCCTGATGTTGCCACAAATTATAGGTAGG  985

seq1  GAAGTGGATGTGCACAGGGATGAGATTAATTACTTTAAAGCCAGTTATAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGATGTGCACAGGGATGAGATTAATTACTTTAAAGCCAGTTATAG  1035

seq1  AGACAATGGTAAGTTCAAATTTCAACGAAGCCATTCTCATGCACTTAAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGGTAAGTTCAAATTTCAACGAAGCCATTCTCATGCACTTAAGG  1085

seq1  GATGGCTGTGGCCCATGCTGGACAATCAGTACGTAACTTTAAATTGAATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGTGGCCCATGCTGGACAATCAGTACGTAACTTTAAATTGAATT  1135

seq1  C  1150
      |
seq2  C  1136