BAC Information

Click to search

BAC

Clone NameB6Ng01-076C20
Chromosome7 (Build37)
Map Location 62,438,095 - 62,438,611
singlet/doubletsinglet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076C20.bB6Ng01-076C20.g
ACCDH892521DH892522
length1,233981
definitionDH892521|Mus musculus domesticus DNA, BAC clone: B6Ng01-076C20, 5' end.DH892522|Mus musculus domesticus DNA, BAC clone: B6Ng01-076C20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaagacctaatactattacttctcaaaat
attccacaaaatataaacaggaacactgcctaattcattctagaaacccg
tagttacactgaaccaaagacccaacaaagaaagagaacttcagtccaat
ttcccttatgaatattgatgtgaaaatactcaatgaaattcttccaaacc
aaatcaaagaacacaaaaaactatcattcaccctgatctagtaggttcat
cccagggatgcaggggtggttcgatatatggaaatcattcaacataatcc
actacataaacaatctcaaagaaagaagaaccacacgatcatttcattag
atgctcatttgacaaaattcaacaccccttcattgtaaaagtcttggaaa
gatcagacattcaaggcccatacctaatcatattcaaagcaatatacagc
aaaccagtatccaacatcaaactaaatggaaagaaacttgaagaaatccc
actaaaatcagggactagccaaggcttcccactctctccctacctattca
atacagtacttgtagtcctagccagaacaattagacaacaacaaaagaca
gtcaaaaggatacaaattcgaaagaaagaagtcaaaatatcactatttgc
agatgatatgatagtatacataagtgagccaaaaaattccaccagagaac
tcctaaacctggctggatataaaattaacccaaacaaatcggtggtcttc
aaaggataaacaagctgagaaagaagttagggaaacaacattcttcacaa
tggtcacaaataatataaaataccttggtgtgaccctaagcaagcaggtg
aaagagttatatgacaagaacttcaagtctctgaagaaagaaatctaaga
agatctcagagttggagaaggattggggaacccagagaggatggggattc
cacaagaagaccaacagagtcaacatatctggacccttgacgtcatccag
agactgaaccaccaaccaaagagcataaaaagatttggacatagtcccca
cacatattgtagcagaatgttatagcttggtcttcttgtgtgtcccccaa
ctagtgggagtggaggcttacgctgacttttgttgcctgcctgtgtgaac
tgtttccttactgggctgcatctttctgacatcattgcctagtctggcaa
gaacttggaggggccttggatgtttggtaaact
gaattctgtaatgaattcatctggccctgtgatgttttgtttgacagact
ttttttttttcaagtgaattccattactatttcttttatttttttctttt
ttttttttattagatattttcttcatttacatttcaaatgttatccccag
agccccctatagcatccccctgccctgctccccaacccatcatgtcccac
ttcctggccctggcattcccctgtactggtgcatatgatctttgcaatac
caagggcctctcctcccattgatggccaaccaatccatcctctgctacgt
gtgcaactagagacacagctctgaagttagttcatattgttgttcctcct
atagggttgcagactcctttagctccttgggtactttctctagctccttc
aataggggccttgtgttccatccaatagatgactgtgagcatccacttct
gtatttgccagggattggcatagactcacaagagagagctatgtcaaggt
cctatcagcaaaatctttctggcatatacaatagtgtctggttttcatag
ttgtttatgggatggatccccaggtggggcagtctctggatggtctttcc
ttctgtcttagctctgaactttgtctctgtaactccttccatggatattt
ttttccacattataagaaggaacgaagtatccacactttggtcttccttc
ttcttgagtttcatgtgttttgcacactgtatcttgaatattctaagttt
ctgggctaatatcagtgagtgtgtatcatgtgagttcttttgagattggg
ttacctcactcagggtgatatccttcacatccatccatttgcctaaaaat
ttcatgaattcattgtttttaatagctgagtagtactccattgtgtaaat
gtaccacattttctgtttcattcctctgctgaggtacatctgggttcttt
ccagcttctggctattataaaataaagctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62438095_62438611
seq2: B6Ng01-076C20.g_164_497

seq1  TCTTTTTTTTTTTTTCATAATGTAAGCAATTCACTGTTCTAGGGTTTAAG  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATGGACTCAGGATTTTTCTTCTTTTGAGAGAGTTGTGTGATCTCACTTTA  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGTTTTCAAAAATTGTCATCATACTACAAGAATATTAACTGAACCAAGCA  150
                                                        
seq2  --------------------------------------------------  0

seq1  GATGTTCAATAAAGGAAAGCTGCATTCTTTTTCTATTAGATATTTTCTTC  200
                          |   || ||||| |||||||||||||||||
seq2  --------------------TCTTTTTTTTTTTTATTAGATATTTTCTTC  30

seq1  ATTTACATTTCAAATGCTATCCCTAAAGTCCCCTATACACCCCCCCTGCC  250
      |||||||||||||||| |||||| | || ||||||||    |||||||||
seq2  ATTTACATTTCAAATGTTATCCCCAGAGCCCCCTATAGCATCCCCCTGCC  80

seq1  CTGCTCCCCAACCCACCCACTCCCTCTTCCTGGCCCTGGCATTCCCCTGT  300
      ||||||||||||||| |   |||| |||||||||||||||||||||||||
seq2  CTGCTCCCCAACCCATCATGTCCCACTTCCTGGCCCTGGCATTCCCCTGT  130

seq1  ACTGGGGCATATGATCTTCACAAGACCAAGGGCCTCTCCTCCCATTGATG  350
      ||||| ||||||||||||  ||| ||||||||||||||||||||||||||
seq2  ACTGGTGCATATGATCTTTGCAATACCAAGGGCCTCTCCTCCCATTGATG  180

seq1  GCCGACTAGGCCATCCTCTGCTACATATGCAACTAGAGACACAGCTTTTG  400
      ||| || |  |||||||||||||| | |||||||||||||||||||    
seq2  GCCAACCAATCCATCCTCTGCTACGTGTGCAACTAGAGACACAGCT----  226

seq1  GGGGGTGGGTACTG--GTTAGTTCATATTGTTGTTCCTCATATAGGGTTG  448
                 |||  ||||||||||||||||||||||| ||||||||||
seq2  -----------CTGAAGTTAGTTCATATTGTTGTTCCTCCTATAGGGTTG  265

seq1  CAGACCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGGGC  498
      ||||| |||||||||||||||||||||||||||||||||||| | |||||
seq2  CAGACTCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTTCAATAGGGGC  315

seq1  CCTGTGTTCCATCCAATAG  517
      | |||||||||||||||||
seq2  CTTGTGTTCCATCCAATAG  334