BAC Information

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BAC

Clone NameB6Ng01-076E02
Chromosome7 (Build37)
Map Location 83,904,731 - 84,033,454
singlet/doubletdoublet
Overlap geneEG244071
Upstream geneKlhl25, LOC100042210, LOC434200
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076E02.bB6Ng01-076E02.g
ACCDH892574DH892575
length5641,183
definitionDH892574|Mus musculus domesticus DNA, BAC clone: B6Ng01-076E02, 5' end.DH892575|Mus musculus domesticus DNA, BAC clone: B6Ng01-076E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,032,885 - 84,033,454)(83,904,731 - 83,905,661)
sequence
catgttttcatgtgcatactctttgctttaaatagtttttattgaacata
actgattatcactgtatttcttgatttaaccctattcaccagacagaaac
aagtatcactcaaacacccatctctggtttcaaaccagcagattttattt
tattagtttccctttggtcagtgagtatggatttgttctctgggatatat
gggtgtcaagaaacgttcaggctgctttccccttgtcaagtagtcaggcc
ctttgagcaggaaccaaagttggtttgacctatagcttcacagaatggat
actgtggttaaaaatcaaagtggaagagatagttgctttattgttaatct
ctagcaaatatacatatacaatttaattcagatataatccaaacaagcgt
gttcatcacatcctctgttcaggtatcttgtccttaggtttctgagtcag
tctgaacagacaaagaggtcatagtgcaatgtctagccttagcatccttg
cactgatggaagtcaaaaattgatagtcaatggtagtgtgtgtgtgtgag
tgtgtgtgtgtgtg
gaattctttacctcataaaattatgtttcaaaagtaaaggcaaacagatg
ttaaagaaatgtgtactggttccaaatagtgtcaaaaagagcttttggaa
agaggggaaataacatgggtcataaactggatgtatataaagacagaaag
ggcactgagaacagacaggtgacagtgaaatgaagactgttattttctct
ttattaatttaacatattggtaaatattaaaagaataatagcaaggctgt
acttgataatttgagcatatacaaacatggttgcatatatgtgaagagaa
tgacttggatgacacaaggggcagagaaagaatagtgattaaagcactga
tactatgtttgaaatatcagcctacttcttactagtgtgtttgtgtcagt
aacaagtgtatgttgcatattcagaaacagtcctatgaacaaaggaaaag
atccactatactaagaaaggggagaaaaatcatataaaatatttgctcta
atctgctgacagtaatcaaaacaaaacagtagttattaacaagttcagga
tatttcaaaggatgaaaactatcatcaataacgaatggcagcacattaat
gataaaggaataaaaatttctaaaaccatgtaacatgaatgtgcttaatc
acataagacacatatggagaatgaaaccaatgcatgagacttgaaaagat
gtatgtacttttacatctgtaggttgcacaacagtagtcagatgtagcag
aaaaaaaaataggacccatcaattatttttataaagggctttacgaaaaa
tcacagaaaagacatagtttttatgctcacatgaaccaatcaccaacact
taccactttgcatgctagaaaacacatttggaccacttattaggaggaaa
ttcatgacaggcattataaacttagcaaactacccatggatggagaggct
atggaacctagagaagaatctaccactgccgctttcctaagctaatataa
atctctagatgcttttctaaacactatctttataccccagatgaatgtag
cctctcattactcatcaaatgagagggagaattccatagaaattaaaaat
tttgaacacaatgaaatgaactttaagttttggcatgatcaacctcacat
agatgaatcggtattggactggaagtacataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84032885_84033454
seq2: B6Ng01-076E02.b_46_615 (reverse)

seq1  CACACACACACACACTCACACACACACACTACCATTGACTATCAATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACTCACACACACACACTACCATTGACTATCAATTTTT  50

seq1  GACTTCCATCAGTGCAAGGATGCTAAGGCTAGACATTGCACTATGACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCATCAGTGCAAGGATGCTAAGGCTAGACATTGCACTATGACCTC  100

seq1  TTTGTCTGTTCAGACTGACTCAGAAACCTAAGGACAAGATACCTGAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTTCAGACTGACTCAGAAACCTAAGGACAAGATACCTGAACAG  150

seq1  AGGATGTGATGAACACGCTTGTTTGGATTATATCTGAATTAAATTGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGATGAACACGCTTGTTTGGATTATATCTGAATTAAATTGTATA  200

seq1  TGTATATTTGCTAGAGATTAACAATAAAGCAACTATCTCTTCCACTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTGCTAGAGATTAACAATAAAGCAACTATCTCTTCCACTTTGA  250

seq1  TTTTTAACCACAGTATCCATTCTGTGAAGCTATAGGTCAAACCAACTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACCACAGTATCCATTCTGTGAAGCTATAGGTCAAACCAACTTTG  300

seq1  GTTCCTGCTCAAAGGGCCTGACTACTTGACAAGGGGAAAGCAGCCTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGCTCAAAGGGCCTGACTACTTGACAAGGGGAAAGCAGCCTGAAC  350

seq1  GTTTCTTGACACCCATATATCCCAGAGAACAAATCCATACTCACTGACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTGACACCCATATATCCCAGAGAACAAATCCATACTCACTGACCA  400

seq1  AAGGGAAACTAATAAAATAAAATCTGCTGGTTTGAAACCAGAGATGGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAACTAATAAAATAAAATCTGCTGGTTTGAAACCAGAGATGGGTG  450

seq1  TTTGAGTGATACTTGTTTCTGTCTGGTGAATAGGGTTAAATCAAGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGATACTTGTTTCTGTCTGGTGAATAGGGTTAAATCAAGAAATA  500

seq1  CAGTGATAATCAGTTATGTTCAATAAAAACTATTTAAAGCAAAGAGTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATAATCAGTTATGTTCAATAAAAACTATTTAAAGCAAAGAGTATG  550

seq1  CACATGAAAACATGGAATTC  570
      ||||||||||||||||||||
seq2  CACATGAAAACATGGAATTC  570

seq1: chr7_83904731_83905661
seq2: B6Ng01-076E02.g_333_1251

seq1  GCATATACAAACATGGTTGCATATATGTGAAGAGAATGACTTGGATGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATACAAACATGGTTGCATATATGTGAAGAGAATGACTTGGATGACA  50

seq1  CAAGGGGCAGAGAAAGAATAGTGATTAAAGCACTGATACTATGTTTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGCAGAGAAAGAATAGTGATTAAAGCACTGATACTATGTTTGAAA  100

seq1  TATCAGCCTACTTCTTACTAGTGTGTTTGTGTCAGTAACAAGTGTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCCTACTTCTTACTAGTGTGTTTGTGTCAGTAACAAGTGTATGTT  150

seq1  GCATATTCAGAAACAGTCCTATGAACAAAGGAAAAGATCCACTATACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTCAGAAACAGTCCTATGAACAAAGGAAAAGATCCACTATACTAA  200

seq1  GAAAGGGGAGAAAAATCATATAAAATATTTGCTCTAATCTGCTGACAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGAGAAAAATCATATAAAATATTTGCTCTAATCTGCTGACAGTA  250

seq1  ATCAAAACAAAACAGTAGTTATTAACAAGTTCAGGATATTTCAAAGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACAAAACAGTAGTTATTAACAAGTTCAGGATATTTCAAAGGATG  300

seq1  AAAACTATCATCAATAACGAATGGCAGCACATTAATGATAAAGGAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATCATCAATAACGAATGGCAGCACATTAATGATAAAGGAATAAA  350

seq1  AATTTCTAAAACCATGTAACATGAATGTGCTTAATCACATAAGACACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTAAAACCATGTAACATGAATGTGCTTAATCACATAAGACACATA  400

seq1  TGGAGAATGAAACCAATGCATGAGACTTGAAAAGATGTATGTACTTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATGAAACCAATGCATGAGACTTGAAAAGATGTATGTACTTTTAC  450

seq1  ATCTGTAGGTTGCACAACAGTAGTCAGATGTAGCAGAAAAAAAAATAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAGGTTGCACAACAGTAGTCAGATGTAGCAGAAAAAAAAATAGGA  500

seq1  CCCATCAATTATTTTTATAAAGGGCTTTACGAAAAATCACAGAAAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAATTATTTTTATAAAGGGCTTTACGAAAAATCACAGAAAAGACA  550

seq1  TAGTTTTTATGCTCACATGAACCAATCACCAACACTTACCACTTTGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTATGCTCACATGAACCAATCACCAACACTTACCACTTTGCATG  600

seq1  CTAGAAAACACATTTGGACCACTTATTAGGAGGAAATTCATGACAGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAACACATTTGGACCACTTATTAGGAGGAAATTCATGACAGGCAT  650

seq1  TATAAACTTAGCAAACTACCCATGGATGGAGAGGCTATGGAACCTAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTTAGCAAACTACCCATGGATGGAGAGGCTATGGAACCTAGAGA  700

seq1  AGAATCTACCACTGCCGCTTTCCTAAGCTAATATAAATCTCTAGATGC-T  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAATCTACCACTGCCGCTTTCCTAAGCTAATATAAATCTCTAGATGCTT  750

seq1  TTCTAAACACTTATCTTTATACTCACAGATGAATGTAG-CTCTCATTACT  798
      |||||||||| ||||||||||| | ||||||||||||| |||||||||||
seq2  TTCTAAACAC-TATCTTTATAC-CCCAGATGAATGTAGCCTCTCATTACT  798

seq1  CATCAAATGAGAGGAGAAATTCCAATAGATATTAAAAATATTTGAACACA  848
      ||||||||||||||   |||||| ||||| ||||||||| ||||||||||
seq2  CATCAAATGAGAGGGAGAATTCC-ATAGAAATTAAAAAT-TTTGAACACA  846

seq1  ATGAAAATGAAACTTTTAAAAGTTTTTGGCATGATCAAATCTACACATAG  898
      ||| ||||| ||||||   ||| |||||||||||||||  |  |||||||
seq2  ATG-AAATG-AACTTT---AAG-TTTTGGCATGATCAA--CCTCACATAG  888

seq1  ATGAATCTGTATTGTACTGGATGTATACATAAT  931
      ||||||| |||||| |||||| |  ||||||||
seq2  ATGAATCGGTATTGGACTGGAAG--TACATAAT  919