BAC Information

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BAC

Clone NameB6Ng01-076H02
Chromosome7 (Build37)
Map Location 117,845,625 - 118,007,092
singlet/doubletdoublet
Overlap geneB430319F04Rik, Ampd3, Rnf141, Xlkd1
Upstream geneLOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70, EG668368, Sbf2, LOC668246, Adm
Downstream geneMrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658, Galntl4, LOC668399
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076H02.bB6Ng01-076H02.g
ACCDH892707DH892708
length1,1321,109
definitionDH892707|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H02, 5' end.DH892708|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,845,625 - 117,846,755)(118,005,985 - 118,007,092)
sequence
gaattcctttggctaaatataagagctggagtgcttagctagaaacagtc
aagggatgtgtttgtcattgttcaggaatgttttataacagatttttttt
cagactcaaaccaactttaaggacacatcatcttacaaaattgttttggg
ctatttcccagtgttaatgcaatacgggaggggttagccgggcatggaaa
ccttagaattccaagtatttaacagcttaaggctaaagttcagaatattt
gaaatctgggctgtttcggaaaaatccagaattaggacgaccatgtccat
ggccagctgtctagcgtgactcaggtaaaagagagaaatccaacaggaaa
tggaagcctgtcctggcattgtaaacatgtgcataggaagtgaggatgca
tggaaaacttcctactgacaaagaaaagaaaggttaggaaacccatgaag
ccacccattgtttcgcttactgggagaggaacgctggcaaaccatcctgt
aagaaagcacgtggccaggccagctgctgccaggggaggctgttcacttt
tagcagatggctcacaaaacagtcttcgccttgagaagtgtccttggctg
gagcctgggtctcagccaggacgcctcagaaacacagttttgtcaatgct
tgaagtggccccatccaagctcacaggtgcctggtgtgttggctataagt
cattggtaatgggaggcagaaaggcatggggactgacgcattggctacct
ctagtcaatagcttctctttttctttaagacagtgtctcactatacagtc
ctggctgacctggaactctcaacatagaccaggctggctctgaactgaca
gagatcagcctacctctacctctggagtggcctgttaaagacaggaacca
ccatgtcagctatcctctttttcgataagaaaaaaaaaagatgactgggc
ttggagagatggctctgcctgtacacttgctcttctagaagacatgggtt
tcaattcccagcacccatttcaggcagcttgcaactgctttcaactgcag
cttcagggggaaacttaaccttttgttttgcagcacttattacgcgccat
tgcacatatccaccccacatctttacattaac
gaattccaggtggttatgagctgcccagtgtgggttctgggatccaaact
caggccctctggaagggcagcccatgctctgaactgttaagccactgttt
cagctccagataagacttttatgagtcttgtctctctgaaaaatgaatct
cctagcaatgttgatctgtcccgtgtatgtaagaagttccaaaggaagga
gtggtgcttttatgagcagtcactatcctaagcctcactattatttcctt
acacattacaaggcaatgcatctgagaggtggtgggcactgcttgtacaa
aggaaaagaaacacaatccatcttcagtctcttagcggcagagccagtca
cgggcggacatgaatgaatgggctccgcaaagcatcacactggagagtgt
gggaactgagtccacaggggaatatgggaactggggaaatcttcagcagc
tgacacagtgctatctgccttcctcacccgtgtgctttctgagtcagcat
tagctaaatgttccagaaagccatccacaaagtacagcctgggcgttcaa
gggatgtcattcatttcctccagtgattttgacaaatcagaagcttgaaa
gcagggaaatcctcagcctatttccagaactctccatccagcttggtgat
tgaacatctgtctcccttactgcgggtggccagccacagtgccccggagg
gatctgcacaatgctccagcacactagcctggtgttactcctcgcctcta
ttttggaccactaggcacccagtccaaggtgccgacctcgtgcaaggtag
gtgtctttaccaggtttctacacggaggctacacaagggcttgggaagcg
tccaaggctccccctgctcttgaccatggactgttgggaatggaggagac
ttgtgaggttattagattgagtggatcttaattgctttacccaagaggtt
tgacttgcactgcagacttctccaaatgactcaacactcaccttgaacat
cattaagaatttcatttggggttaggcaaagtttttaacataattatttg
acttttttaaaatgagaagtcattgtttttcaaggattattcacgaagca
aaccaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117845625_117846755
seq2: B6Ng01-076H02.b_46_1177

seq1  GAATTCCTTTGGCTAAATATAAGAGCTGGAGTGCTTAGCTAGAAACAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGCTAAATATAAGAGCTGGAGTGCTTAGCTAGAAACAGTC  50

seq1  AAGGGATGTGTTTGTCATTGTTCAGGAATGTTTTATAACAGATTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATGTGTTTGTCATTGTTCAGGAATGTTTTATAACAGATTTTTTTT  100

seq1  CAGACTCAAACCAACTTTAAGGACACATCATCTTACAAAATTGTTTTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCAAACCAACTTTAAGGACACATCATCTTACAAAATTGTTTTGGG  150

seq1  CTATTTCCCAGTGTTAATGCAATACGGGAGGGGTTAGCCGGGCATGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCCAGTGTTAATGCAATACGGGAGGGGTTAGCCGGGCATGGAAA  200

seq1  CCTTAGAATTCCAAGTATTTAACAGCTTAAGGCTAAAGTTCAGAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAATTCCAAGTATTTAACAGCTTAAGGCTAAAGTTCAGAATATTT  250

seq1  GAAATCTGGGCTGTTTCGGAAAAATCCAGAATTAGGACGACCATGTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTGGGCTGTTTCGGAAAAATCCAGAATTAGGACGACCATGTCCAT  300

seq1  GGCCAGCTGTCTAGCGTGACTCAGGTAAAAGAGAGAAATCCAACAGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCTGTCTAGCGTGACTCAGGTAAAAGAGAGAAATCCAACAGGAAA  350

seq1  TGGAAGCCTGTCCTGGCATTGTAAACATGTGCATAGGAAGTGAGGATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCTGTCCTGGCATTGTAAACATGTGCATAGGAAGTGAGGATGCA  400

seq1  TGGAAAACTTCCTACTGACAAAGAAAAGAAAGGTTAGGAAACCCATGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACTTCCTACTGACAAAGAAAAGAAAGGTTAGGAAACCCATGAAG  450

seq1  CCACCCATTGTTTCGCTTACTGGGAGAGGAACGCTGGCAAACCATCCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCATTGTTTCGCTTACTGGGAGAGGAACGCTGGCAAACCATCCTGT  500

seq1  AAGAAAGCACGTGGCCAGGCCAGCTGCTGCCAGGGGAGGCTGTTCACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCACGTGGCCAGGCCAGCTGCTGCCAGGGGAGGCTGTTCACTTT  550

seq1  TAGCAGATGGCTCACAAAACAGTCTTCGCCTTGAGAAGTGTCCTTGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGATGGCTCACAAAACAGTCTTCGCCTTGAGAAGTGTCCTTGGCTG  600

seq1  GAGCCTGGGTCTCAGCCAGGACGCCTCAGAAACACAGTTTTGTCAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGGGTCTCAGCCAGGACGCCTCAGAAACACAGTTTTGTCAATGCT  650

seq1  TGAAGTGGCCCCATCCAAGCTCACAGGTGCCTGGTGTGTTGGCTATAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGGCCCCATCCAAGCTCACAGGTGCCTGGTGTGTTGGCTATAAGT  700

seq1  CATTGGTAATGGGAGGCAGAAAGGCATGGGGACTGACGCATTGGCTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTAATGGGAGGCAGAAAGGCATGGGGACTGACGCATTGGCTACCT  750

seq1  CTAGTCAATAGCTTCTCTTTTTCTTTAAGACAGTGTCTCACTATACAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAATAGCTTCTCTTTTTCTTTAAGACAGTGTCTCACTATACAGTC  800

seq1  CTGGCTGACCTGGAACTCTCAACATAGACCAGGCTGGCTCTGAACTGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGACCTGGAACTCTCAACATAGACCAGGCTGGCTCTGAACTGACA  850

seq1  GAGATCAGCCTACCTCTACCTCTGGAGTGGCCTGTTAAAGACAGGAACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAGCCTACCTCTACCTCTGGAGTGGCCTGTTAAAGACAGGAACCA  900

seq1  CCATGTCAGGCTATCCTCTTTTTCGATAAGAAAAAAAAAAAGATGACTGG  950
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  CCATGTCA-GCTATCCTCTTTTTCGATAAG-AAAAAAAAAAGATGACTGG  948

seq1  GCTTGGAGAGATGGCTCTGCCTGTACACTTGCTCTTCTAGAAGACATGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAGAGATGGCTCTGCCTGTACACTTGCTCTTCTAGAAGACATGGG  998

seq1  -TTCAATTCCCAGCACCCATTTCAGGCAGCTTGCAACTGCTTCCAACTGC  1049
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTCAATTCCCAGCACCCATTTCAGGCAGCTTGCAACTGCTTTCAACTGC  1048

seq1  AGCTCCA-GGGGAAACTAAACCTTTTGTTTCTGCAGGCAC-TATTACGCA  1097
      |||| || ||||||||| |||||||||||| |||| |||| |||||||| 
seq2  AGCTTCAGGGGGAAACTTAACCTTTTGTTT-TGCA-GCACTTATTACGCG  1096

seq1  C--ATGCACATATCCA-CCCACATCTATACAATTAAC  1131
      |   |||||||||||| ||||||||| ||| ||||||
seq2  CCATTGCACATATCCACCCCACATCTTTAC-ATTAAC  1132

seq1: chr7_118005985_118007092
seq2: B6Ng01-076H02.g_69_1177 (reverse)

seq1  ACCTTGGTTTGCTCCTTGAATAAAATCCTTTAAAAACAAATGACTTCTCA  50
      ||||||||||||| | |||||  ||||||| |||||| ||||||||||||
seq2  ACCTTGGTTTGCTTCGTGAAT--AATCCTTGAAAAAC-AATGACTTCTCA  47

seq1  TTTTTAAAAAAAGTCAAATTATTATCGTTAAAAACTTTCCATAACCCCAA  100
      ||||  ||||||||||||| ||||| |||||||||||| | |||||||||
seq2  TTTT--AAAAAAGTCAAATAATTAT-GTTAAAAACTTTGCCTAACCCCAA  94

seq1  ATAAAATTCTAAGTGATG-TCAAGGTGAGTG-TGAGTCATTTGGAG-AGT  147
      || ||||||| | ||||| |||||||||||| |||||||||||||| |||
seq2  ATGAAATTCTTAATGATGTTCAAGGTGAGTGTTGAGTCATTTGGAGAAGT  144

seq1  CTGCAGTGC-AGTCAAACCTCTTTGGGTAAGCAA-TAAGATCCACTCAAT  195
      ||||||||| ||||||||||||| ||  |||||| |||||||||||||||
seq2  CTGCAGTGCAAGTCAAACCTCTTGGGTAAAGCAATTAAGATCCACTCAAT  194

seq1  CTGATAACCTCACAAGTCTCCTCCATTCCCAACAGTCCATGGTCAAGAGC  245
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAACCTCACAAGTCTCCTCCATTCCCAACAGTCCATGGTCAAGAGC  244

seq1  AGGGGGAGCCTTGGACGCTTCCCAAGCCCTTGTGTAGCCTCCGTGTAGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGCCTTGGACGCTTCCCAAGCCCTTGTGTAGCCTCCGTGTAGAA  294

seq1  ACCTGGT-AAGACACCTACCTTGCACGAGGTCGGCACCTTGGACTGGGTG  344
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTAAAGACACCTACCTTGCACGAGGTCGGCACCTTGGACTGGGTG  344

seq1  CCTAGTGGTCC-AAATAGAGGCGAGGAGTAACACCAGGCTAGTGTGCTGG  393
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGGTCCAAAATAGAGGCGAGGAGTAACACCAGGCTAGTGTGCTGG  394

seq1  AGCATTGTGCAGATCCCTCCGGGGCACTGTGGCTGGCCACCCGCAGTAAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGTGCAGATCCCTCCGGGGCACTGTGGCTGGCCACCCGCAGTAAG  444

seq1  GGAGACAGATGTTCAATCACCAAGCTGGATGGAGAGTTCTGGAAATAGGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAGATGTTCAATCACCAAGCTGGATGGAGAGTTCTGGAAATAGGC  494

seq1  TGAGGATTTCCCTGCTTTCAAGCTTCTGATTTGTCAAAATCACTGGAGGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATTTCCCTGCTTTCAAGCTTCTGATTTGTCAAAATCACTGGAGGA  544

seq1  AATGAATGACATCCCTTGAACGCCCAGGCTGTACTTTGTGGATGGCTTTC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGACATCCCTTGAACGCCCAGGCTGTACTTTGTGGATGGCTTTC  594

seq1  TGGAACATTTAGCTAATGCTGACTCAGAAAGCACACGGGTGAGGAAGGCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATTTAGCTAATGCTGACTCAGAAAGCACACGGGTGAGGAAGGCA  644

seq1  GATAGCACTGTGTCAGCTGCTGAAGATTTCCCCAGTTCCCATATTCCCCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCACTGTGTCAGCTGCTGAAGATTTCCCCAGTTCCCATATTCCCCT  694

seq1  GTGGACTCAGTTCCCACACTCTCCAGTGTGATGCTTTGCGGAGCCCATTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACTCAGTTCCCACACTCTCCAGTGTGATGCTTTGCGGAGCCCATTC  744

seq1  ATTCATGTCCGCCCGTGACTGGCTCTGCCGCTAAGAGACTGAAGATGGAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTCCGCCCGTGACTGGCTCTGCCGCTAAGAGACTGAAGATGGAT  794

seq1  TGTGTTTCTTTTCCTTTGTACAAGCAGTGCCCACCACCTCTCAGATGCAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTTTTCCTTTGTACAAGCAGTGCCCACCACCTCTCAGATGCAT  844

seq1  TGCCTTGTAATGTGTAAGGAAATAATAGTGAGGCTTAGGATAGTGACTGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGTAATGTGTAAGGAAATAATAGTGAGGCTTAGGATAGTGACTGC  894

seq1  TCATAAAAGCACCACTCCTTCCTTTGGAACTTCTTACATACACGGGACAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAGCACCACTCCTTCCTTTGGAACTTCTTACATACACGGGACAG  944

seq1  ATCAACATTGCTAGGAGATTCATTTTTCAGAGAGACAAGACTCATAAAAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACATTGCTAGGAGATTCATTTTTCAGAGAGACAAGACTCATAAAAG  994

seq1  TCTTATCTGGAGCTGAAACAGTGGCTTAACAGTTCAGAGCATGGGCTGCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTGGAGCTGAAACAGTGGCTTAACAGTTCAGAGCATGGGCTGCC  1044

seq1  CTTCCAGAGGGCCTGAGTTTGGATCCCAGAACCCACACTGGGCAGCTCAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGGGCCTGAGTTTGGATCCCAGAACCCACACTGGGCAGCTCAT  1094

seq1  AACCACCTGGAATTC  1108
      |||||||||||||||
seq2  AACCACCTGGAATTC  1109