BAC Information

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BAC

Clone NameB6Ng01-076H20
Chromosome7 (Build37)
Map Location 123,630,040 - 123,630,661
singlet/doubletsinglet
Overlap genenone
Upstream geneSox6, LOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798
Downstream geneNucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330, Xylt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076H20.bB6Ng01-076H20.g
ACCDH892742DH892743
length1,235622
definitionDH892742|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H20, 5' end.DH892743|Mus musculus domesticus DNA, BAC clone: B6Ng01-076H20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttaaaggtataacataatttacatctgaaacctgtttattta
tttttttatcatgaagcctatgagcaagacaaacctgtttgcttttctaa
taagagatctggcagttttaactaactaataaattaactaatgaacttac
acagtaagtggattaccttagggtaaagagctagttgcctattgttctct
gtcaagctaccattagcttagccattaatacgatcagagatctgagaagg
atatattatattctagatgccatatattaattaaaatggcagagattagt
ccatagtctactgcctagacagttcttccaggttcctatggtctccatca
caaagtgggcagaggcagtctggccatcaggcccagaagatgagaggcct
tttctgtagaagaggaacatggaagagatgagctcaccttgtcttgagca
atatgagacaactctctgggtatcctctgcttttcagcagttcaggccaa
gacctgacagtctcaccccctggttggtataccacaatccaggtagagtc
ctttgtcactatgtccatatcttcttggagaccttggggtagagtcactg
ttaggagttgggagtctctgtctgacataataagtcatatttaatgtcat
attcagcagatctctgacaggtttgagaattagtacctattaagcatacc
tgaattaaacaacctatgtctgagggggattggaaagatggctcagtgtt
ttacagcactggttgctcttgcagaggacataagttcaattcccaacgcc
cacattgtggttcacaaccatctgtaacttcaattctaggggagtcaaca
cattcttctgacttccatggatacacggaacacatagattcatacacata
aaataaaataagtaaaagtaaaacaacctatgtgtttagttatctactct
aaactgtaccttgtgaacataaaacaggaggtttaataaagcttaatcct
ataatttaacacattaaagattctatcatttataaggtactgacatatca
acctgaaatttttaattataatagcttttatgaaactagaactatttagt
tggccttgagctgttaagtttgagcctttaaaaatacatggatgttagtg
aactccttgtcatattccaaaataaccttcaacttaaacttgtctaaaac
ggaactgggagcctctgtatactttgataagggtt
gaattcaaggtttgcctaggacaaaacaagttccagaaccaggcatggtg
gtacacacctttaatctgggccacaccttctactggggacctacataagg
acgttggaagaaggaagattcactcttcttcgtctgcttgaatttacttg
ccagcacatctgttggaatctactagccttgtgggactgaacaactacga
gatctttggacttcgtattcacagctgaccattgttggggagttggacta
tatactttaagtatcataacaaattcccttaaaacatagagactaaccac
aagttctgtgactttagagaaccctgactaatgcaggggcatctgaagaa
atggcctatcaattaaaaacatcctgagtacctacattaggacgctcaca
acgacctgttaactccagctccagggacctaacaccttcttctagtttcc
atggggacacacacacacacacacacacacacacacacacagagagagag
agagagagagagagagagagagagagagaaacagagacagagaggcatac
acataaataaaaggaaatctttaaaactacgtggtttgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_123630040_123630661
seq2: B6Ng01-076H20.g_67_688

seq1  GAATTCAAGGTTTGCCTAGGACAAAACAAGTTCCAGAACCAGGCATGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTTTGCCTAGGACAAAACAAGTTCCAGAACCAGGCATGGTG  50

seq1  GTACACACCTTTAATCTGGGCCACACCTTCTACTGGGGACCTACATAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACACCTTTAATCTGGGCCACACCTTCTACTGGGGACCTACATAAGG  100

seq1  ACGTTGGAAGAAGGAAGATTCACTCTTCTTCGTCTGCTTGAATTTACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGGAAGAAGGAAGATTCACTCTTCTTCGTCTGCTTGAATTTACTTG  150

seq1  CCAGCACATCTGTTGGAATCTACTAGCCTTGTGGGACTGAACAACTACGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACATCTGTTGGAATCTACTAGCCTTGTGGGACTGAACAACTACGA  200

seq1  GATCTTTGGACTTCGTATTCACAGCTGACCATTGTTGGGGAGTTGGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTGGACTTCGTATTCACAGCTGACCATTGTTGGGGAGTTGGACTA  250

seq1  TATACTTTAAGTATCATAACAAATTCCCTTAAAACATAGAGACTAACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTAAGTATCATAACAAATTCCCTTAAAACATAGAGACTAACCAC  300

seq1  AAGTTCTGTGACTTTAGAGAACCCTGACTAATGCAGGGGCATCTGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGTGACTTTAGAGAACCCTGACTAATGCAGGGGCATCTGAAGAA  350

seq1  ATGGCCTATCAATTAAAAACATCCTGAGTACCTACATTAGGACGCTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTATCAATTAAAAACATCCTGAGTACCTACATTAGGACGCTCACA  400

seq1  ACGACCTGTTAACTCCAGCTCCAGGGACCTAACACCTTCTTCTAGTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACCTGTTAACTCCAGCTCCAGGGACCTAACACCTTCTTCTAGTTTCC  450

seq1  ATGGGGACACACACACACACACACACACACACACACACACAGAGAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGACACACACACACACACACACACACACACACACACAGAGAGAGAG  500

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAGAGACAGAGAGGCATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACAGAGACAGAGAGGCATAC  550

seq1  ACATAAATAAAAGGAAATCTTTAAAACTACGTGGTTTGTGTGTGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATAAAAGGAAATCTTTAAAACTACGTGGTTTGTGTGTGTGTGTG  600

seq1  TGTGTGTGTGTGTGTGTGTGTG  622
      ||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTG  622