BAC Information

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BAC

Clone NameB6Ng01-076L21
Chromosome7 (Build37)3 (Build37)
Map Location 100,143,057 - 100,143,403120,214,783 - 120,215,681
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDlg2, Ccdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp
Downstream geneA830059I20Rik, LOC100040298, LOC666783, EG638305
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076L21.bB6Ng01-076L21.g
ACCDH892918DH892919
length1,0151,020
definitionDH892918|Mus musculus domesticus DNA, BAC clone: B6Ng01-076L21, 5' end.DH892919|Mus musculus domesticus DNA, BAC clone: B6Ng01-076L21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(100,143,057 - 100,143,403)(120,214,783 - 120,215,681)
sequence
gaattcttcctaacaaaaggttaaatatctaaacatgaaacaggaccact
gtttttgctcaaacacacacacacacacacacacacacacacacacacac
acacacacacacacaaaggaagagggaaagacaggaatgataagtataac
ctcagaaaatcaagcaatagctctgaccctttccagttcagatttcttaa
taaagaagattgagacttttaatttttttgtttgaggactactaatttga
aatgatttcaaatgtatttagataaacatagcctatgttcaatttactat
ctagctaacagagtaagatttgagatgaggggaaggtgaatgatgagctg
gtaatagattacagggttcctcctatagacattgaatcatcgaatttgat
tctcatcttgtgcagggtttctttttttttttccacaaagtcatttagac
acccatgaatagcccacagacactctgggcacagtggttctagctctgga
ggtgtgggtgcaggtgggctagccccgagggtatgaggtcaggagagctg
cccctgcctcctgcagattgaggctctgagtacactagccaggagcagtg
ctggagaactcaccctggtggtacagataaaggagacaggttgtgctgtc
tagctcagctactgctctcagaactagatcctgggttttgaatcggccca
cccccaaatcgatatcatttgctaatggttgggatgtgttgaaagggcca
gtccagccattccaaagctgcacaatctccatgatgcagggcaacaatag
gataaccctcctggtaaggatccaatattgatgctgtcattgaagccaga
gatctcaaaccagagcaatgagtctgcagtgaacatctgcaagtgaacat
aatgcggacagaggattgtgctgtgggacacactgtgacacaccagtgcc
tatggccatggttaataagctgtggagctgttatttcagtctaaagtgag
acatagaatttgttg
gaattccctaattagtaggaataattagattgctgattaactgtagggga
tttttattatatagacacatgacctgcaaataatgacagtttgtatcttc
cattttaattatggaacttttcccccaattaccaagttggccagaatttt
cacttttgtgttaaagatccagtggcggtgggtagccttgtctcgatgct
cgctttaccaggaaatcagagtccttttaacaaatgcaatattgtgcaaa
gagctggcttcattcatctgtgatacctggtaaatttgtgaagttttatc
ttttatcaggtaaagatatattagtcactgatcatcattgtatttttgta
ataagcttcaacataacatttttctctggaaattatttttgaatcaacat
tatgtataatgaaggatatacagcttaagcattcagtgcaatgagttgta
ataaatgtagacacccaagtgttcatcattgcagtaaagacatggatcat
cttcattaaaaagaaaagggtattcctggtttcagtcatttcctccatat
ttcaaaacctaggatacaacaatatttctattatcaaaaacaaggcttcc
ctgttttagaatgttctagaaactaagtcctttctccgatcatgtctttt
ctctgcatttatgctactgagaatataagttagtcatcctttttatcatt
ttatctctattctatgaatctagagaattttgtatgccatctgttaaaca
ataataggagtagttctggatttcaattattagatttattattaacaaac
ttactatgaatgtctgcttccatagtattaggtgcacatatggcttcaat
ttcttagatacatacctatgatagcctaatattcttaatgtggatttttt
tttagctttcttatctataacagtatctaaagctatatatttccatctaa
ctgttgtttgaactccattcaacaattcaacattatgttggtatggtcaa
acaactccaaatattcaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100143057_100143403
seq2: B6Ng01-076L21.b_100_476

seq1  TGCTCGAACACACACACACACACACACACACACACACACACACACACACA  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAAACACACACACACACACACACACACACACACACACACACACACA  50

seq1  CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  100
      || | | | | ||  |||| || ||| || ||  || |   | |     |
seq2  CACACACACAAAGGAAGAGGGAAAGACAG-GAATGATAAGTATAACCTCA  99

seq1  GAGA---GAGAGAGAG-------------------AGAGTGC--CATGGA  126
      || |    ||  | ||                   ||| | |   ||  |
seq2  GAAAATCAAGCAATAGCTCTGACCCTTTCCAGTTCAGATTTCTTAATAAA  149

seq1  GAGCCACAGATTTTTCCCTATAATTTATTTCTTCGCTAGTCCTAGGCAGC  176
      ||     |||||    | | |||||| ||| || |  ||  |||  |   
seq2  GA-----AGATTGAGACTTTTAATTTTTTTGTTTG--AGGACTA--CTAA  190

seq1  ATGGTGAGGAGGTGGGATG--ATTCCTTTCTCATTGCCTTCCTTTCTTAG  224
       | |  | ||  |   |||   ||   |   ||| ||||   ||      
seq2  TTTGAAATGATTTCAAATGTATTTAGATAAACATAGCCTATGTT------  234

seq1  CCCAGGCTTGAACCT--CCAACGGCTCCTTCTTTGA-------GGCAGAA  265
        ||   |   | ||  | ||| |       |||||       || ||  
seq2  --CAATTTACTATCTAGCTAACAGAGTAAGATTTGAGATGAGGGGAAGGT  282

seq1  GAATG-GGA----GTTCTTCCTTCCTGCCTT-CTTCTCTTGAC---TAGT  306
      |||||  ||    ||  |   || | |  || || || | |||    | |
seq2  GAATGATGAGCTGGTAATAGATTACAGGGTTCCTCCTATAGACATTGAAT  332

seq1  CTTTTCTTTTGATT---AGATT-TGCCTACTTTCTTTTTTTTTTT  347
      | |    |||||||   |  || |||    |||||||||||||||
seq2  CATCGAATTTGATTCTCATCTTGTGCAGGGTTTCTTTTTTTTTTT  377

seq1: chr3_120214783_120215681
seq2: B6Ng01-076L21.g_67_965

seq1  GAATTCCCTAATTAGTAGGAATAATTAGATTGCTGATTAACTGTAGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAATTAGTAGGAATAATTAGATTGCTGATTAACTGTAGGGGA  50

seq1  TTTTTATTATATAGACACATGACCTGCAAATAATGACAGTTTGTATCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTATATAGACACATGACCTGCAAATAATGACAGTTTGTATCTTC  100

seq1  CATTTTAATTATGGAACTTTTCCCCCAATTACCAAGTTGGCCAGAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAATTATGGAACTTTTCCCCCAATTACCAAGTTGGCCAGAATTTT  150

seq1  CACTTTTGTGTTAAAGATCCAGTGGCGGTGGGTAGCCTTGTCTCGATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTGTGTTAAAGATCCAGTGGCGGTGGGTAGCCTTGTCTCGATGCT  200

seq1  CGCTTTACCAGGAAATCAGAGTCCTTTTAACAAATGCAATATTGTGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTACCAGGAAATCAGAGTCCTTTTAACAAATGCAATATTGTGCAAA  250

seq1  GAGCTGGCTTCATTCATCTGTGATACCTGGTAAATTTGTGAAGTTTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGCTTCATTCATCTGTGATACCTGGTAAATTTGTGAAGTTTTATC  300

seq1  TTTTATCAGGTAAAGATATATTAGTCACTGATCATCATTGTATTTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAGGTAAAGATATATTAGTCACTGATCATCATTGTATTTTTGTA  350

seq1  ATAAGCTTCAACATAACATTTTTCTCTGGAAATTATTTTTGAATCAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTTCAACATAACATTTTTCTCTGGAAATTATTTTTGAATCAACAT  400

seq1  TATGTATAATGAAGGATATACAGCTTAAGCATTCAGTGCAATGAGTTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATAATGAAGGATATACAGCTTAAGCATTCAGTGCAATGAGTTGTA  450

seq1  ATAAATGTAGACACCCAAGTGTTCATCATTGCAGTAAAGACATGGATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTAGACACCCAAGTGTTCATCATTGCAGTAAAGACATGGATCAT  500

seq1  CTTCATTAAAAAGAAAAGGGTATTCCTGGTTTCAGTCATTTCCTCCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAAAAAGAAAAGGGTATTCCTGGTTTCAGTCATTTCCTCCATAT  550

seq1  TTCAAAACCTAGGATACAACAATATTTCTATTATCAAAAACAAGGCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACCTAGGATACAACAATATTTCTATTATCAAAAACAAGGCTTCC  600

seq1  CTGTTTTAGAATGTTCTAGAAACTAAGTCCTTTCTCCGATCATGTCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTAGAATGTTCTAGAAACTAAGTCCTTTCTCCGATCATGTCTTTT  650

seq1  CTCTGCATTTATGCTACTGAGAATATAAGTTAGTCATCCTTTTTATCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATTTATGCTACTGAGAATATAAGTTAGTCATCCTTTTTATCATT  700

seq1  TTATCTCTATTCTATGAATCTAGAGAATTTTGTATGCCATCTGTTAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTATTCTATGAATCTAGAGAATTTTGTATGCCATCTGTTAAACA  750

seq1  ATAATAGGAGTAGTTCTGGATTTCAATTATTAGATTTATTATTAACAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGGAGTAGTTCTGGATTTCAATTATTAGATTTATTATTAACAAAC  800

seq1  TTACTATGAATGTCTGCTTCCATAGTATTAGGTGCACATATGGCTTCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATGAATGTCTGCTTCCATAGTATTAGGTGCACATATGGCTTCAAT  850

seq1  TTCTTAGATACATACCTATGATAGCCTAATATTCTTAATGTGGATTTTT  899
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGATACATACCTATGATAGCCTAATATTCTTAATGTGGATTTTT  899