BAC Information

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BAC

Clone NameB6Ng01-077F21
Chromosome7 (Build37)
Map Location 28,914,861 - 28,915,865
singlet/doubletsinglet
Overlap geneLOC100043774, 9530053A07Rik
Upstream geneCyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4
Downstream geneFbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077F21.bB6Ng01-077F21.g
ACCDH893364DH893365
length1,2121,004
definitionDH893364|Mus musculus domesticus DNA, BAC clone: B6Ng01-077F21, 5' end.DH893365|Mus musculus domesticus DNA, BAC clone: B6Ng01-077F21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctgaacatgataaaaacaatctacagcaaacca
gtaaccaacaccaaagtaaatggtgggaagctggaagcaatcccactaaa
atcagggactggacaaggctgcccactttctccctacctattcaacattg
tacttgaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggcagaagtcaaaatatcactttttgcagatgatat
gatagtatatgtaagtgaccctaaaaattccaccagagaactcctaagcc
tgataaacagcttcaatgaagtagctggatataaaattaactcaaacaag
tcaatgacctttctctacacaaaggataaacaggctgaggaagaaattag
ggaaacaacacccttctcaagtcacaaataatataaaataccttggcgtg
gctctaactaaggaagtgaaagatctgtatgataagaacttcaaaactct
aaagaaagaaataaaagaagatctcagaagatggaaagatctcccctgct
catggattgccaggattaatatagtaaaaatggctatcttgccaaaagca
atctacagattcaatgcaatccccatcaaaattccaactcaattcttcaa
cgaattggaaagggcaatctccaaattcatctggaataacaaaaaaccta
gaatagcaaaaactcttctcaagaataaaggaacctctggtggaatcacc
atgcctgacctaaagctgtactacagagcaattgtgataaaaactgcatg
gtactggtatagcgacagacaagtaaaccaatggaatacaattgaagacc
cagaaatgaacccacacacctatggtcacttgatctttgacaagggagca
aaaccatccagtggaaaaagacagcattttcacaaatggtgctggcacaa
ctggtggttatcatatagagaatgcgaattgatccattcttatctccttg
tactaaggacaaatctaagtggattaggacttccacattatagtcagaga
cactgaaccttatagagagaaagtagggaaaggcctcgagaaggatggta
cagggaaaatttctgaataaaaacagtaatgcttatgtctgtagaaagac
aatccacatggactcataattgcaagctcgtcagcagagaaccttcttga
ccaaggtcatct
gaattcttccccaccagtattcctggggtcttctgtggcctcccgggtca
accctgaagaaaacgcagttgtgggtccagctacctagttcctccccgtt
acaaacccagcccctgggccttcctgagcaccagttgaagtaattctccc
tatgcttccatgtccttcctaacgtatgcagcatccacctccgagccttc
ctggctttggctgccccaaagcctgagcaccttgtacagggctcttgaac
tcagacactgcagggtcagacgagggacagaacggtgtgagacagtccag
gtggtgactgtagatgccaaagcagcatactcacctcgagtaaggtgcca
ctgtttttgtttttgttttttttttttttttttttttgctgactgcactt
atggtttagtaactaagtatccctggctgatctagaactcactctgtaga
ttagactggcctcaaatgcacagagatccaccttcctctgcctcctggat
gctgggataaaacagcagcttgcaccaccatgcctggctgtggtgattta
tttttgatgctacattttctacttttctgatgaaactggttggttagccg
actctttacatgaagtctgagaccccacaccccctttaaagtcctgtgag
agcatacactctgaccggattcagttgctggtatgattcctgttttaata
gatcttggtgcaagatgatgaagggaagttgaggatcatggaagtttaga
cagaatcacgtaacaatcgaagcaggtagacttctcaacactccaaacat
tggagtgggggctcccacctcatttcttggcatgttctcacttccactgc
agcctgggaggggctggggacagggtttatgaaaggttacaaatgaaaga
tgccgacccaggcagtcagtttctcatggtcaaggcccaggacgtggaat
gaggttcatcctgacttactccatagagggttgctccagccagagggccc
aaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28914861_28915865
seq2: B6Ng01-077F21.g_69_1072 (reverse)

seq1  TGTTGGGCACTCTGGGCTGGAGCAACCCTCCTATGGGGTAAGTCAGATTG  50
      |||||||| |||| ||||||||||||||| |||||| |||||||||  ||
seq2  TGTTGGGCCCTCT-GGCTGGAGCAACCCT-CTATGGAGTAAGTCAGGATG  48

seq1  AACCTCA-TCCACGTCCTGGGGCCTTGGACCATGGGAAACTGACCTGCCT  99
      ||||||| |||||||||| ||||||| ||||||| |||||||| ||||||
seq2  AACCTCATTCCACGTCCT-GGGCCTT-GACCATGAGAAACTGA-CTGCCT  95

seq1  GGGTCGGCATCTTTCATTTGTAAACCTTTCATAAACCCTGT-CCCAGCCC  148
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  GGGTCGGCATCTTTCATTTGT-AACCTTTCATAAACCCTGTCCCCAGCCC  144

seq1  CTCCCAGGCTGCAGTGGAAGTGAGAACATG-CAAGAAATGAGGTGGGAGC  197
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCCCAGGCTGCAGTGGAAGTGAGAACATGCCAAGAAATGAGGTGGGAGC  194

seq1  CCCCACTCC-ATGTTTGGAGTGTTGAG-AGTCTACCTGCTTCGATTGTTA  245
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  CCCCACTCCAATGTTTGGAGTGTTGAGAAGTCTACCTGCTTCGATTGTTA  244

seq1  CGTGATTCTGTCTAAACTTCCATGATCCTCAACTTCCCTTCATCATCTTG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATTCTGTCTAAACTTCCATGATCCTCAACTTCCCTTCATCATCTTG  294

seq1  CACCAAGATCTATTAAAACAGGAATCATACCAGCAACTGAATCCGGTCAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGATCTATTAAAACAGGAATCATACCAGCAACTGAATCCGGTCAG  344

seq1  AGTGTATGCTCTCACAGGACTTTAAAGGGGGTGTGGGGTCTCAGACTTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGCTCTCACAGGACTTTAAAGGGGGTGTGGGGTCTCAGACTTCA  394

seq1  TGTAAAGAGTCGGCTAACCAACCAGTTTCATCAGAAAAGTAGAAAATGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAGTCGGCTAACCAACCAGTTTCATCAGAAAAGTAGAAAATGTA  444

seq1  GCATCAAAAATAAATCACCACAGCCAGGCATGGTGGTGCAAGCTGCTGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAAAATAAATCACCACAGCCAGGCATGGTGGTGCAAGCTGCTGTT  494

seq1  TTATCCCAGCATCCAGGAGGCAGAGGAAGGTGGATCTCTGTGCATTTGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCAGCATCCAGGAGGCAGAGGAAGGTGGATCTCTGTGCATTTGAG  544

seq1  GCCAGTCTAATCTACAGAGTGAGTTCTAGATCAGCCAGGGATACTTAGTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTAATCTACAGAGTGAGTTCTAGATCAGCCAGGGATACTTAGTT  594

seq1  ACTAAACCATAAGTGCAGTCAGCAAAAAAAAAAAAAAAAAAAAAACAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACCATAAGTGCAGTCAGCAAAAAAAAAAAAAAAAAAAAAACAAAA  644

seq1  ACAAAAACAGTGGCACCTTACTCGAGGTGAGTATGCTGCTTTGGCATCTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAGTGGCACCTTACTCGAGGTGAGTATGCTGCTTTGGCATCTA  694

seq1  CAGTCACCACCTGGACTGTCTCACACCGTTCTGTCCCTCGTCTGACCCTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACCACCTGGACTGTCTCACACCGTTCTGTCCCTCGTCTGACCCTG  744

seq1  CAGTGTCTGAGTTCAAGAGCCCTGTACAAGGTGCTCAGGCTTTGGGGCAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTGAGTTCAAGAGCCCTGTACAAGGTGCTCAGGCTTTGGGGCAG  794

seq1  CCAAAGCCAGGAAGGCTCGGAGGTGGATGCTGCATACGTTAGGAAGGACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCCAGGAAGGCTCGGAGGTGGATGCTGCATACGTTAGGAAGGACA  844

seq1  TGGAAGCATAGGGAGAATTACTTCAACTGGTGCTCAGGAAGGCCCAGGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCATAGGGAGAATTACTTCAACTGGTGCTCAGGAAGGCCCAGGGG  894

seq1  CTGGGTTTGTAACGGGGAGGAACTAGGTAGCTGGACCCACAACTGCGTTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTGTAACGGGGAGGAACTAGGTAGCTGGACCCACAACTGCGTTT  944

seq1  TCTTCAGGGTTGACCCGGGAGGCCACAGAAGACCCCAGGAATACTGGTGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGGTTGACCCGGGAGGCCACAGAAGACCCCAGGAATACTGGTGG  994

seq1  GGAAGAATTC  1005
      ||||||||||
seq2  GGAAGAATTC  1004