BAC Information

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BAC

Clone NameB6Ng01-077O10
Chromosome7 (Build37)
Map Location 29,516,810 - 29,668,017
singlet/doubletdoublet
Overlap geneFbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12
Upstream geneZfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27
Downstream geneActn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077O10.bB6Ng01-077O10.g
ACCDH893755DH893756
length1,1711,136
definitionDH893755|Mus musculus domesticus DNA, BAC clone: B6Ng01-077O10, 5' end.DH893756|Mus musculus domesticus DNA, BAC clone: B6Ng01-077O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,666,841 - 29,668,017)(29,516,810 - 29,517,957)
sequence
gaattccagtccccctgcgctggggtagggacataatggtaactgtgaag
cctatgtcatcatgctaccacgggggaaattgaggcacagagcaaggaac
tggactctacctgaaaatggaagacccccgcgtagccatcttggaaacct
tgtccaggggggaccacccggtacaggagcctggggtagagtgtgaggga
ggcagcagctgcaagaagccagcagtttcctaggaggaggaggaaagagg
ctcagattaggtacgagtggaccagagaccagcagactgaagaaagaagc
catggggacaggagacagaggagaggagctgttcaagtcctgggtctagg
ggctccagacagtcacaagggggctcacccaagcttccctggcacacatc
tgttctgctcatgtcttcacagatgaactggggctcagcacaaaactcct
ggaagattaaggttccagagaagccaggtaagggaaggctggaacaatgg
agaagtcagaggcctgagccctgacaccagtacccaggtagtgagggcct
ccaaccttgggaaagtctgtgggtgggagtttgccttcctggatcccctt
gaatcccgtggctgagtctgctcttatcccccactcccttttcctaagaa
ccaggattctagacctcagcctgtctctcttacactcaagggttcatgtc
ctggccctgatccctcaggctaagactctggccctcctccctcagaccca
agagtccaggccctggtcctcctccctcagacccaggccctggccctcct
ccctcagacccaagagttcatgccctggtcctcctccctcagacccaaga
gttcagccctggtcctcctccctcagacccaagagttcatgccctggtcc
tcctccctcagacccaggccctggccctcctccctcagatccagagtcca
ggacctggtcctctccctcagacccaggagtctggtcctgggtcctcccc
atcagacccaggttccaggcccagccccactttacatggggctctcaatt
caaccctttggcctttcctgatgcaagtcccagcttgtcataccaagggc
aatcagggccagcaggaatcaagggtcacgtatacaggatcccggaatcc
aggcaggctctccggaaggct
gaattcaaacaacactaggtatgcaagactttaaatggtcagccatggag
atgaagctaggtacagaaagagtgagaggcagcaggaagggtgcaggaac
ataggattggagaccaaagggtgtgggtctccaagaccctggagaaaaat
gacagagtaaaggaaatgatgggccttgggtgagaatatggtgggtagta
gactcactgccctccagtgccctccagctgagatcttcagatgggggcct
ggtggagggttgagacggaatagtctggatgcggctcggaggagcaagga
cactactggtttggaaggaacataagcagagacttggattctagatacct
tcaggaagaaagtatgagatatatagtgaattccaaggcccaagtgggtg
acacaagtctgggcagaaatggttttccctcattgacctttgttgttttt
tttaaaaagtctcactatgtgggacaggctagacttaaattcacagcaat
tctcctgcctctccctccagagtgcatgctctccaccacaccctgatggg
actagattagacttggagggagtctttggtcccagaggaaagggtgtgct
ctatatccttgtctgctgtcaggtatcctgacctcctgaccgggtccgtg
accttgggaagctgaacaccaacccctcttcacccagaggacgacgccag
cggcaggtcatgggagcgcggccctcgcgacggcagatgactgaagctcg
gcgcctggctctaccaagctgccccctgagctgctggtgcaggtgctgag
ccacgtgccgcctcgcgcgttagtgacccgctgccggccagtgtgccggg
cctggcgcgacctggtagatggcccaagtatattggctgctgcaactggc
tcgcgaccgcagcgcggagggcagaagcccttctacgccttggccagcgc
tgtcccgcgacgccgacgccgacgcgacgtcgacgcaacgccacgacgag
ttcccattctgcgctcttggccgattctgcctgagagcgccgttggtcgc
atcctcatcacaattcttcgagatacggtgggaaccgggggcaagttaac
gctccgaggctgtcttcattggggtggggcctgacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29666841_29668017
seq2: B6Ng01-077O10.b_47_1217 (reverse)

seq1  AGCCATCCGAAGAGCTTGCCTGGATTCCGGGATCCTGT-TTCGTGACCCT  49
      |||| |||| ||||| |||||||||||||||||||||| | |||||||||
seq2  AGCCTTCCGGAGAGCCTGCCTGGATTCCGGGATCCTGTATACGTGACCCT  50

seq1  TGCTTTCCTGCTGGCCCTGA-TGCCCTTGGCTATGACAAGCTGGGACCTG  98
      ||  |||||||||||||||| ||||||||| |||||||||||||||| ||
seq2  TG-ATTCCTGCTGGCCCTGATTGCCCTTGG-TATGACAAGCTGGGACTTG  98

seq1  ACTCAGAGAAGGCCAAAGGGGTGGAATGGAAGAGGCCCCATGTAAAGTGG  148
        ||||  |||||||||||| || | ||  ||| ||||||||||||||||
seq2  CATCAGGAAAGGCCAAAGGGTTGAATTG--AGA-GCCCCATGTAAAGTGG  145

seq1  GGCTGGG-CTGGGACCTGGGTCTGATGGGGGAGGGCCAGGACAAGGACTC  197
      ||||||| |||| |||||||||||||||||  |  ||||||| | |||||
seq2  GGCTGGGCCTGGAACCTGGGTCTGATGGGGAGGACCCAGGACCA-GACTC  194

seq1  CTGGGTCTGAGGGAGGAGGACCAGGTCCTGGACTCTTGGATCTGAGGGAG  247
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  CTGGGTCTGAGGGA-GAGGACCAGGTCCTGGACTC-TGGATCTGAGGGAG  242

seq1  GAGGGCCAGGGCCTGGGTCTGAGGGAGGAGGACCAGGGCCTGAACTCTTG  297
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGGGCCAGGGCCTGGGTCTGAGGGAGGAGGACCAGGGCATGAACTCTTG  292

seq1  GGTCTGAGGGAGGAGGACCAGGGCCTGAACTCTTGGGTCTGAGGGAGGAG  347
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGTCTGAGGGAGGAGGACCAGGG-CTGAACTCTTGGGTCTGAGGGAGGAG  341

seq1  GACCAGGGCCTGAACTCTTGGGTCTGAGGGAGGAGGGCCAGGGCCTGGGT  397
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGGCATGAACTCTTGGGTCTGAGGGAGGAGGGCCAGGGCCTGGGT  391

seq1  CTGAGGGAGGAGGACCAGGGCCTGGACTCTTGGGTCTGAGGGAGGAGGGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGAGGAGGACCAGGGCCTGGACTCTTGGGTCTGAGGGAGGAGGGC  441

seq1  CAGAGTCTTAGCCTGAGGGATCAGGGCCAGGACATGAACCCTTGAGTGTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTTAGCCTGAGGGATCAGGGCCAGGACATGAACCCTTGAGTGTA  491

seq1  AGAGAGACAGGCTGAGGTCTAGAATCCTGGTTCTTAGGAAAAGGGAGTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGGCTGAGGTCTAGAATCCTGGTTCTTAGGAAAAGGGAGTGG  541

seq1  GGGATAAGAGCAGACTCAGCCACGGGATTCAAGGGGATCCAGGAAGGCAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAGAGCAGACTCAGCCACGGGATTCAAGGGGATCCAGGAAGGCAA  591

seq1  ACTCCCACCCACAGACTTTCCCAAGGTTGGAGGCCCTCACTACCTGGGTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACCCACAGACTTTCCCAAGGTTGGAGGCCCTCACTACCTGGGTA  641

seq1  CTGGTGTCAGGGCTCAGGCCTCTGACTTCTCCATTGTTCCAGCCTTCCCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTCAGGGCTCAGGCCTCTGACTTCTCCATTGTTCCAGCCTTCCCT  691

seq1  TACCTGGCTTCTCTGGAACCTTAATCTTCCAGGAGTTTTGTGCTGAGCCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGCTTCTCTGGAACCTTAATCTTCCAGGAGTTTTGTGCTGAGCCC  741

seq1  CAGTTCATCTGTGAAGACATGAGCAGAACAGATGTGTGCCAGGGAAGCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATCTGTGAAGACATGAGCAGAACAGATGTGTGCCAGGGAAGCTT  791

seq1  GGGTGAGCCCCCTTGTGACTGTCTGGAGCCCCTAGACCCAGGACTTGAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGCCCCCTTGTGACTGTCTGGAGCCCCTAGACCCAGGACTTGAAC  841

seq1  AGCTCCTCTCCTCTGTCTCCTGTCCCCATGGCTTCTTTCTTCAGTCTGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCTCCTCTGTCTCCTGTCCCCATGGCTTCTTTCTTCAGTCTGCT  891

seq1  GGTCTCTGGTCCACTCGTACCTAATCTGAGCCTCTTTCCTCCTCCTCCTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTGGTCCACTCGTACCTAATCTGAGCCTCTTTCCTCCTCCTCCTA  941

seq1  GGAAACTGCTGGCTTCTTGCAGCTGCTGCCTCCCTCACACTCTACCCCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTGCTGGCTTCTTGCAGCTGCTGCCTCCCTCACACTCTACCCCAG  991

seq1  GCTCCTGTACCGGGTGGTCCCCCCTGGACAAGGTTTCCAAGATGGCTACG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGTACCGGGTGGTCCCCCCTGGACAAGGTTTCCAAGATGGCTACG  1041

seq1  CGGGGGTCTTCCATTTTCAGGTAGAGTCCAGTTCCTTGCTCTGTGCCTCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGGTCTTCCATTTTCAGGTAGAGTCCAGTTCCTTGCTCTGTGCCTCA  1091

seq1  ATTTCCCCCGTGGTAGCATGATGACATAGGCTTCACAGTTACCATTATGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCCGTGGTAGCATGATGACATAGGCTTCACAGTTACCATTATGT  1141

seq1  CCCTACCCCAGCGCAGGGGGACTGGAATTC  1177
      ||||||||||||||||||||||||||||||
seq2  CCCTACCCCAGCGCAGGGGGACTGGAATTC  1171

seq1: chr7_29516810_29517957
seq2: B6Ng01-077O10.g_70_1205

seq1  GAATTCAAACAACACTAGGTATGCAAGACTTTAAATGGTCAGCCATGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAACACTAGGTATGCAAGACTTTAAATGGTCAGCCATGGAG  50

seq1  ATGAAGCTAGGTACAGAAAGAGTGAGAGGCAGCAGGAAGGGTGCAGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTAGGTACAGAAAGAGTGAGAGGCAGCAGGAAGGGTGCAGGAAC  100

seq1  ATAGGATTGGAGACCAAAGGGTGTGGGTCTCCAAGACCCTGGAGAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTGGAGACCAAAGGGTGTGGGTCTCCAAGACCCTGGAGAAAAAT  150

seq1  GACAGAGTAAAGGAAATGATGGGCCTTGGGTGAGAATATGGTGGGTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTAAAGGAAATGATGGGCCTTGGGTGAGAATATGGTGGGTAGTA  200

seq1  GACTCACTGCCCTCCAGTGCCCTCCAGCTGAGATCTTCAGATGGGGGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACTGCCCTCCAGTGCCCTCCAGCTGAGATCTTCAGATGGGGGCCT  250

seq1  GGTGGAGGGTTGAGACGGAATAGTCTGGATGCGGCTCGGAGGAGCAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGGTTGAGACGGAATAGTCTGGATGCGGCTCGGAGGAGCAAGGA  300

seq1  CACTACTGGTTTGGAAGGAACATAAGCAGAGACTTGGATTCTAGATACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTGGTTTGGAAGGAACATAAGCAGAGACTTGGATTCTAGATACCT  350

seq1  TCAGGAAGAAAGTATGAGATATATAGTGAATTCCAAGGCCCAAGTGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGAAAGTATGAGATATATAGTGAATTCCAAGGCCCAAGTGGGTG  400

seq1  ACACAAGTCTGGGCAGAAATGGTTTTCCCTCATTGACCTTTGTTGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTCTGGGCAGAAATGGTTTTCCCTCATTGACCTTTGTTGTTTTT  450

seq1  TTTAAAAAGTCTCACTATGTGGGACAGGCTAGACTTAAATTCACAGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGTCTCACTATGTGGGACAGGCTAGACTTAAATTCACAGCAAT  500

seq1  TCTCCTGCCTCTCCCTCCAGAGTGCATGCTCTCCACCACACCCTGATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGCCTCTCCCTCCAGAGTGCATGCTCTCCACCACACCCTGATGGG  550

seq1  ACTAGATTAGACTTGGAGGGAGTCTTTGGTCCCAGAGGAAAGGGTGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATTAGACTTGGAGGGAGTCTTTGGTCCCAGAGGAAAGGGTGTGCT  600

seq1  CTATATCCTTGTCTGCTGTCAGGTATCCTGACCTCCTGACCGGGTCCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCCTTGTCTGCTGTCAGGTATCCTGACCTCCTGACCGGGTCCGTG  650

seq1  ACCTTGGGAAGCTGAACACCAACCCCTCTTCACCCAGAGGACGACGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGGAAGCTGAACACCAACCCCTCTTCACCCAGAGGACGACGCCAG  700

seq1  CGGCAGGTCATGGGAGCGCGGCCCTCGCGACGGCAGATGACTGAAGCTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGGTCATGGGAGCGCGGCCCTCGCGACGGCAGATGACTGAAGCTCG  750

seq1  GCGCCTGGCTCTAACCAAGCTGCCCCCTGAGCTGCTGGTGCAGGTGCTGA  800
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGGCTCT-ACCAAGCTGCCCCCTGAGCTGCTGGTGCAGGTGCTGA  799

seq1  GCCACGTGCCGCCTCGCGCGTTAGTGACCCGCTGCCGGCCAGTGTGCCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGTGCCGCCTCGCGCGTTAGTGACCCGCTGCCGGCCAGTGTGCCGG  849

seq1  GCCTGGCGCGACCTGGTAGATGGCCCAAGTATA-TGGCTGCTGCAACTGG  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCCTGGCGCGACCTGGTAGATGGCCCAAGTATATTGGCTGCTGCAACTGG  899

seq1  CTCGCGACCGCAGCGCGGAGGGCAG-AGCCC-TCTACGCCTTGGCCCAGC  947
      ||||||||||||||||||||||||| ||||| |||||||||||| |||||
seq2  CTCGCGACCGCAGCGCGGAGGGCAGAAGCCCTTCTACGCCTTGG-CCAGC  948

seq1  GCTGTCCCGCCGACGCCGACGCCGACGCCGACGCCGACGGCAACCGCCAC  997
      ||||||||| ||||||||||||||||| ||||| |||| |||| ||||||
seq2  GCTGTCCCG-CGACGCCGACGCCGACG-CGACGTCGAC-GCAA-CGCCAC  994

seq1  GACGAGTTCCCATTCTGCGCTCTGGCCCGATTCTGCCTGAGAGCGCCGTT  1047
      ||||||||||||||||||||||| | |||||||||||||||||||||| |
seq2  GACGAGTTCCCATTCTGCGCTCTTGGCCGATTCTGCCTGAGAGCGCCG-T  1043

seq1  TGGCCGCAACCTCATCCACAACTCCTGCGGAGAACGTGGGTACCGGGGGC  1097
      ||| |||| |||||| ||||| || |   || |  ||||| |||||||||
seq2  TGGTCGCATCCTCAT-CACAATTCTTCGAGATACGGTGGGAACCGGGGGC  1092

seq1  AGGGTTTAGCGTCCGGAGGCGGGGCTTCTAGTTGGTGGGTGGGGCCTGAC  1147
      | |  ||| ||  | |||||  | ||||   |||  ||||||||||||||
seq2  AAG--TTAACGCTCCGAGGC-TGTCTTC--ATTG--GGGTGGGGCCTGAC  1135

seq1  C  1148
      |
seq2  C  1136