BAC Information

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BAC

Clone NameB6Ng01-078H17
Chromosome7 (Build37)
Map Location 65,953,153 - 66,064,133
singlet/doubletdoublet
Overlap geneAtp10a
Upstream geneGabrb3, EG668807, LOC434189
Downstream geneLOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078H17.bB6Ng01-078H17.g
ACCDH894168DH894169
length1051,072
definitionDH894168|Mus musculus domesticus DNA, BAC clone: B6Ng01-078H17, 5' end.DH894169|Mus musculus domesticus DNA, BAC clone: B6Ng01-078H17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,064,029 - 66,064,133)(65,953,153 - 65,954,231)
sequence
tagaataacaagcctcctctacatctattgcatatccttggagggcaaga
cctctataaactcggtgaagaaacatgaaaagaggaagaagaaggaggag
gagga
gaattcatcagaacatttttgatatggaaatgttttgttttccttatgga
aataaagatcaacagaagctgaattaatttgagtaatgtttttccacact
ctgcatagattatattttttgaaagcttgtgtgtggaaacaagttggttt
agcagcatgaattttaacatttgaactacaatatggtagatttgagtctc
aaaacaggaggaatgcctagtaggggccttatttccacagaaaggtgcaa
gattgggggggggagtgtaaaggctcaaactttctgtcatcaggtgtgtg
aacttgggctgggaggctatcttctgattttccttttctctttttattag
attggcattatacaactctcatgaaaaaccagaaagcggggcccagggaa
gatggctcagtcattaaaagcacttgcttttgaaagcatctctcagagga
tgggcatttggttcctagaacttatgtactcacgtcaagtggtcctctgg
tggctgtacctccagcccagggaatgagatgtcctcttctggtctgtcag
ggtaactgtacatacaggcaagtacccacagacatatacatactcataaa
taagaatgaatcttaatattttagaataagtgaatcaaatgaggtcataa
gtgtgattaccccccatacactgtaagagcttaaaaactgctcattacta
ttattactaacaatatcgttatgtatataaagaagatgcaaagggatttc
catctgttgccagtgcctatagtattttgcctttcaaatattcatttacc
aacatgtattaatagtggtagtaaaggggtttatgcacgcacgcacgtat
cctggccacccattctaatctcgagcaatccactctttccttcagtctcc
tcacaggaaagagaatgggtgctgcctgtgctttgtgtctggcttatatc
attgagcctaatgttgcccagttctgtgtgctgtactgcaggaccggctt
tcattcttaacaccttcgtgagatgcactgtctgtcatcgctaccacttt
ccctacccttcatctctcacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_66064029_66064133
seq2: B6Ng01-078H17.b_49_153 (reverse)

seq1  TCCTCCTCCTCCTTCTTCTTCCTCTTTTCATGTTTCTTCACCGAGTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTTCTTCTTCCTCTTTTCATGTTTCTTCACCGAGTTTAT  50

seq1  AGAGGTCTTGCCCTCCAAGGATATGCAATAGATGTAGAGGAGGCTTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCTTGCCCTCCAAGGATATGCAATAGATGTAGAGGAGGCTTGTTA  100

seq1  TTCTA  105
      |||||
seq2  TTCTA  105

seq1: chr7_65953153_65954231
seq2: B6Ng01-078H17.g_68_1139

seq1  GAATTCATCAGAACATTTTTGATATGGAAATGTTTTGTTTTCCTTATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGAACATTTTTGATATGGAAATGTTTTGTTTTCCTTATGGA  50

seq1  AATAAAGATCAACAGAAGCTGAATTAATTTGAGTAATGTTTTTCCACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGATCAACAGAAGCTGAATTAATTTGAGTAATGTTTTTCCACACT  100

seq1  CTGCATAGATTATATTTTTTGAAAGCTTGTGTGTGGAAACAAGTTGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATAGATTATATTTTTTGAAAGCTTGTGTGTGGAAACAAGTTGGTTT  150

seq1  AGCAGCATGAATTTTAACATTTGAACTACAATATGGTAGATTTGAGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATGAATTTTAACATTTGAACTACAATATGGTAGATTTGAGTCTC  200

seq1  AAAACAGGAGGAATGCCTAGTAGGGGCCTTATTTCCACAGAAAGGTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGAGGAATGCCTAGTAGGGGCCTTATTTCCACAGAAAGGTGCAA  250

seq1  GATTGGGGGGGGGAGTGTAAAGGCTCAAACTTTCTGTCATCAGGTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGGGGGGGAGTGTAAAGGCTCAAACTTTCTGTCATCAGGTGTGTG  300

seq1  AACTTGGGCTGGGAGGCTATCTTCTGATTTTCCTTTTCTCTTTTTATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGGCTGGGAGGCTATCTTCTGATTTTCCTTTTCTCTTTTTATTAG  350

seq1  ATTGGCATTATACAACTCTCATGAAAAACCAGAAAGCGGGGCCCAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCATTATACAACTCTCATGAAAAACCAGAAAGCGGGGCCCAGGGAA  400

seq1  GATGGCTCAGTCATTAAAAGCACTTGCTTTTGAAAGCATCTCTCAGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGTCATTAAAAGCACTTGCTTTTGAAAGCATCTCTCAGAGGA  450

seq1  TGGGCATTTGGTTCCTAGAACTTATGTACTCACGTCAAGTGGTCCTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATTTGGTTCCTAGAACTTATGTACTCACGTCAAGTGGTCCTCTGG  500

seq1  TGGCTGTACCTCCAGCCCAGGGAATGAGATGTCCTCTTCTGGTCTGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTACCTCCAGCCCAGGGAATGAGATGTCCTCTTCTGGTCTGTCAG  550

seq1  GGTAACTGTACATACAGGCAAGTACCCACAGACATATACATACTCATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTGTACATACAGGCAAGTACCCACAGACATATACATACTCATAAA  600

seq1  TAAGAATGAATCTTAATATTTTAGAATAAGTGAATCAAATGAGGTCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATGAATCTTAATATTTTAGAATAAGTGAATCAAATGAGGTCATAA  650

seq1  GTGTGATTACCCCCCATACACTGTAAGAGCTTAAAAACTGCTCATTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTACCCCCCATACACTGTAAGAGCTTAAAAACTGCTCATTACTA  700

seq1  TTATTACTAACAATATCGTTATGTATATAAAGAAGATGCAAAGGGATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTAACAATATCGTTATGTATATAAAGAAGATGCAAAGGGATTTC  750

seq1  CATCTGTTGCCAGTGCCTATAGTATTTTGCCTTTCAAATATTCATTTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTTGCCAGTGCCTATAGTATTTTGCCTTTCAAATATTCATTTACC  800

seq1  AACATGTATTAATAGTGGTAGTAAAGGGGTTTATGCACGCACGCACGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTATTAATAGTGGTAGTAAAGGGGTTTATGCACGCACGCACGTAT  850

seq1  CCTGGCCACCCATTCTAATCTCGAGCAATCCACTCTTTCCTTCAGTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCACCCATTCTAATCTCGAGCAATCCACTCTTTCCTTCAGTCTCC  900

seq1  TCACAGGAAAGAGAATGGGTGCTGCCTGTTGCTTTGTGTCTGGCTTATAT  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCACAGGAAAGAGAATGGGTGCTGCCTG-TGCTTTGTGTCTGGCTTATAT  949

seq1  CATTGAGCCTAATGTTGCCCAGTTCTGTGTGCTGTACTGCAGGGAACCGG  1000
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  CATTGAGCCTAATGTTGCCCAGTTCTGTGTGCTGTACTGCAGG--ACCGG  997

seq1  CTTTCATTCTTTACACCTTCGTGAGATTGCACTGTCTGTCCATTCGCTA-  1049
      ||||||||||| |||||||||||||| |||||||||||||   |||||| 
seq2  CTTTCATTCTTAACACCTTCGTGAGA-TGCACTGTCTGTC--ATCGCTAC  1044

seq1  CACTTTCCCTACCCTTTCATCTTCTCACAG  1079
      |||||||||||||| |||||| ||||||||
seq2  CACTTTCCCTACCC-TTCATC-TCTCACAG  1072