BAC Information

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BAC

Clone NameB6Ng01-078J14
Chromosome7 (Build37)
Map Location 30,050,558 - 30,195,389
singlet/doubletdoublet
Overlap geneSpint2, Ppp1r14a, Neud4, Sipa1l3
Upstream geneEid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b
Downstream geneLOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078J14.bB6Ng01-078J14.g
ACCDH894251DH894252
length1,1881,116
definitionDH894251|Mus musculus domesticus DNA, BAC clone: B6Ng01-078J14, 5' end.DH894252|Mus musculus domesticus DNA, BAC clone: B6Ng01-078J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,050,558 - 30,051,765)(30,194,266 - 30,195,389)
sequence
gaattccaggttagtctggctagagttgtctttaaacacacacacacaca
cacacacacacacacacacacacacacacaccaaaaacaaaaccaaccag
aacactgagcggatggttcagctgaagacaactccattcctaaacgtgtc
ctccttcctgggacctcaagcgctaagacaagcttgagagcacacacgca
cacagatacatgttaaataaacccctaccaccgctaccaccttcacaatg
aaacagaatcacacagtaacaccctttacttccacacagggcactggagc
gtgaagagacctacactcgcactgatctgctcagagcccaggttctggga
caagggctcttctgagcagccaagggggaatgctgaactgacacccacag
gcagtggcaagacacaaaacagggctgcttggaagctaacataagctgga
ctctctatctcaatctgaggagtcataaaggcaaactcccctcatcagaa
acctctgctttcagttacagggtcacccacagtaacatgccaatcatacc
agccaaggctgatgggatgtggctcgacatcatttcaccattaaaagggc
tttcactgttaaataaaccagactaaagaacgatgtggctgggtgctgta
ctcagaaggcagaagcaggtcaatcctgaggttaaggccagtctgctcta
cacagccagtgccagcccagcactgagaccctagctacaaagagaaagaa
atgttattggtctgagtacttcaggtaaccgtgaaaggcacgtacacccc
gtctctcttccaacgctgaggaaagtcccagggcctagagcctatccatg
agctacacagcagccgcaggtcctactgcacatgtacacaggccatgaca
catttggggggacagggtctcaaatgttgggattacagacacgtctgacc
taaagtacaaaatcatttctactgcttctaaaacaggtaagaaaacagga
ggctgggcagacaggtggtccaccattctttacaactccagaattgggag
gtaggtacaagaggattagatcacctcaactggaacctagcccagtctac
tcagcccagtttcaggtagcaaagaacgagcagactcactgtcttgctta
attcttttttttttctttttcaagaatattttattatt
gaattcactcatcccgggcctctgctcccgggcattgggccgttgtggct
cttctgtgtgtcttctgtattgacagcagcatgaacatctgtgcacctgc
cttgacatgccatggtataaaaataaaatagagtgcacaccaagaatttc
aatatatacttttcattcactattcctctttccccaagggagaagaatca
tgcctattaaacacccttaaaagcagggcaggtcaccagggccaggttga
gtgctgtagatgcacactgcccttttcaattagaaacatgaatcctctgg
cttctttaacactgagtacaaaacacaggttttcatggtcaaggccagga
ccactggggtgaggttaatggtctgtctttgcctcgacacttcctagtaa
gatttccaatgtgtccatccatcttggctcctgagggtactgtaccatgg
cccctgttattgttattgttcacactttgttgagatcagggacagccagg
aagaagtcagagcttcacctggatccactaagctgttgctctatttccag
aatccgtgtcagtcatgtgtacccacaacacactttttcttaggagcaga
gtggtcaagggtgagaaccagactaccggggtttgagtactaactgtgct
tcctgccaagccgtgggtgggacttggccatgtcactgtccttgcctgtt
ttatgagatgggcatgtggatgtccctgctgtgtggggttgtcagtgcat
acaggttagtgcattctaatctggaagcctgaagctggcagaggatgtct
ggcttcgtcttgctattagcccgtcatctcttccttcccaagagcatgca
atgagaggtccatgagaccttagtcttcccagcacctcgtggactcagtc
gcctggagccctgaaaactccgtggaggtgacaggacgaaacagcggcag
caacaactggaggcagagatgcaagtggaccaggctctcagcagctctgc
ccctcctcgcccccagcatctcctgcagaggtccctggagactatttatt
tcagtattttacccacatacgaaccctcagcggattccgtctccgatgtg
gggtttggtctgaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30050558_30051765
seq2: B6Ng01-078J14.b_41_1228

seq1  GAATTCCAGGTTAGTCTGGCTAGAGTTGTCTTTAAACACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTAGTCTGGCTAGAGTTGTCTTTAAACACACACACACACA  50

seq1  CACACACACACACACACACACACACACACACCAAAAACAAAACCAACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACCAAAAACAAAACCAACCAG  100

seq1  AACACTGAGCGGATGGTTCAGCTGAAGACAACTCCATTCCTAAACGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGAGCGGATGGTTCAGCTGAAGACAACTCCATTCCTAAACGTGTC  150

seq1  CTCCTTCCTGGGACCTCAAGCGCTAAGACAAGCTTGAGAGCACACACGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCTGGGACCTCAAGCGCTAAGACAAGCTTGAGAGCACACACGCA  200

seq1  CACAGATACATGTTAAATAAACCCCTACCACCGCTACCACCTTCACAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATACATGTTAAATAAACCCCTACCACCGCTACCACCTTCACAATG  250

seq1  AAACAGAATCACACAGTAACACCCTTTACTTCCACACAGGGCACTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAATCACACAGTAACACCCTTTACTTCCACACAGGGCACTGGAGC  300

seq1  GTGAAGAGACCTACACTCGCACTGATCTGCTCAGAGCCCAGGTTCTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGACCTACACTCGCACTGATCTGCTCAGAGCCCAGGTTCTGGGA  350

seq1  CAAGGGCTCTTCTGAGCAGCCAAGGGGGAATGCTGAACTGACACCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCTCTTCTGAGCAGCCAAGGGGGAATGCTGAACTGACACCCACAG  400

seq1  GCAGTGGCAAGACACAAAACAGGGCTGCTTGGAAGCTAACATAAGCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGCAAGACACAAAACAGGGCTGCTTGGAAGCTAACATAAGCTGGA  450

seq1  CTCTCTATCTCAATCTGAGGAGTCATAAAGGCAAACTCCCCTCATCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTATCTCAATCTGAGGAGTCATAAAGGCAAACTCCCCTCATCAGAA  500

seq1  ACCTCTGCTTTCAGTTACAGGGTCACCCACAGTAACATGCCAATCATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGCTTTCAGTTACAGGGTCACCCACAGTAACATGCCAATCATACC  550

seq1  AGCCAAGGCTGATGGGATGTGGCTCGACATCATTTCACCATTAAAAGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGGCTGATGGGATGTGGCTCGACATCATTTCACCATTAAAAGGGC  600

seq1  TTTCACTGTTAAATAAACCAGACTAAAGAACGATGTGGCTGGGTGCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGTTAAATAAACCAGACTAAAGAACGATGTGGCTGGGTGCTGTA  650

seq1  CTCAGAAGGCAGAAGCAGGTCAATCCTGAGGTTAAGGCCAGTCTGCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGGCAGAAGCAGGTCAATCCTGAGGTTAAGGCCAGTCTGCTCTA  700

seq1  CACAGCCAGTGCCAGCCCAGCACTGAGACCCTAGCTACAAAGAGAAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCAGTGCCAGCCCAGCACTGAGACCCTAGCTACAAAGAGAAAGAA  750

seq1  ATGTTATTGGTCTGAGTACTTCAGGTAACCGTGAAAGGCACGTACACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATTGGTCTGAGTACTTCAGGTAACCGTGAAAGGCACGTACACCCC  800

seq1  GTCTCTCTTCCAACGCTGAGGAAAGTCCCAGGGCCTAGAGCCTATCCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTTCCAACGCTGAGGAAAGTCCCAGGGCCTAGAGCCTATCCATG  850

seq1  AGCTACACAGCAGCCGCAGGTCCTACTGCACATGTACACAGGCCATGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACACAGCAGCCGCAGGTCCTACTGCACATGTACACAGGCCATGACA  900

seq1  CAATTTGGGGGGACAGGGTCTCAAATGTTGGGATTACAGACACGTCTGAC  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-ATTTGGGGGGACAGGGTCTCAAATGTTGGGATTACAGACACGTCTGAC  949

seq1  CTAAAGTACAAAATCATTTCTACTGCTTCTAAAACAGGTAAGAAAACAGG  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTAAAGTACAAAATCATTTCTACTGCTTCTAAAACAGGTAAGAAAACA-G  998

seq1  GAGGCTGGGCAGACAGGTGGTCACACATTCTATACAACCCCAGAATTGGG  1050
      ||||||||||||||||||||||   |||||| |||||| |||||||||||
seq2  GAGGCTGGGCAGACAGGTGGTCCACCATTCTTTACAACTCCAGAATTGGG  1048

seq1  AGGTAGGTACAAGAGGATTAGATCACCTCAAACTGGAACCTAGCCCAGTC  1100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGGTAGGTACAAGAGGATTAGATCACCTC-AACTGGAACCTAGCCCAGTC  1097

seq1  TACTCAAGCCCAGTTACAGGGTAGCCAGAGGAACGGAGCAAGACTCACTG  1150
      ||||| ||||||||| || ||||||   | |||| |||| ||||||||||
seq2  TACTC-AGCCCAGTTTCA-GGTAGC--AAAGAAC-GAGC-AGACTCACTG  1141

seq1  TCTTGCTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATTTATT  1200
      ||||||          ||  || |||||||||| ||||| ||||  ||||
seq2  TCTTGC----------TTAATTCTTTTTTTTTTCTTTTTCAAGA-ATATT  1180

seq1  TTATTATT  1208
      ||||||||
seq2  TTATTATT  1188

seq1: chr7_30194266_30195389
seq2: B6Ng01-078J14.g_70_1185 (reverse)

seq1  GCTTCAGACACAAACCACAACATCGGAGACGGATACTGCTGAGGG-TCGT  49
      ||||||||| |||||| | ||||||||||||||  | |||||||| ||||
seq2  GCTTCAGAC-CAAACC-CCACATCGGAGACGGAATCCGCTGAGGGTTCGT  48

seq1  ATGTGGTATAATTACTGGAATAAAT-GGCTCCAGGGACCTCTGCAGGAGA  98
      ||||||   || ||||| ||||||| | ||||||||||||||||||||||
seq2  ATGTGGGTAAAATACTGAAATAAATAGTCTCCAGGGACCTCTGCAGGAGA  98

seq1  TGCTGGGGGGCGGGGAGGGGCAGAGCTGCTGAGAGCCTGGTCCACCTGCA  148
      |||| ||||||| |||||||||||||||||||||||||||||||| ||||
seq2  TGCT-GGGGGCGAGGAGGGGCAGAGCTGCTGAGAGCCTGGTCCACTTGCA  147

seq1  TCCTCTGACCTCCAGTTGTTGCTGGCCTGCTGTTTTTCGTCCTGTCACCT  198
      | ||||| ||||||||||||||||  | ||||  ||||||||||||||||
seq2  T-CTCTG-CCTCCAGTTGTTGCTG--CCGCTG--TTTCGTCCTGTCACCT  191

seq1  CCACGGAGTTCTCAGGGCTCCAGACGACTGAGTCCACGAGGTGCTGGGAA  248
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  CCACGGAGTTTTCAGGGCTCCAGGCGACTGAGTCCACGAGGTGCTGGGAA  241

seq1  GACTAGGGTCTCATGGACCTCTCATTGCATGCTCTTGGGGAAGGGAAGAG  298
      ||||| |||||||||||||||||||||||||||||||||  | |||||||
seq2  GACTAAGGTCTCATGGACCTCTCATTGCATGCTCTTGGG--AAGGAAGAG  289

seq1  ATGACGGGCTAATAGCAAGACGAAGCCAGACATCCTCTGCCAGCTTCAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACGGGCTAATAGCAAGACGAAGCCAGACATCCTCTGCCAGCTTCAGG  339

seq1  CTTCCAGATTAGAATGCACTAACCTGTATGCACTGACAACCCCACACAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGATTAGAATGCACTAACCTGTATGCACTGACAACCCCACACAGC  389

seq1  AGGGACATCCACATGCCCATCTCAT-AAACAGGCAAGGACAGTGACATGG  447
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGGACATCCACATGCCCATCTCATAAAACAGGCAAGGACAGTGACATGG  439

seq1  CCAAGTCCCACCCACGGCTTGGCAGGAAGCACAGTTAGTACTCAAACCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCCCACCCACGGCTTGGCAGGAAGCACAGTTAGTACTCAAACCCC  489

seq1  GGTAGTCTGGTTCTCACCCTTGACCACTCTGCTCCTAAGAAAAAGTGTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCTGGTTCTCACCCTTGACCACTCTGCTCCTAAGAAAAAGTGTGT  539

seq1  TGTGGGTACACATGACTGACACGGATTCTGGAAATAGAGCAACAGCTTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTACACATGACTGACACGGATTCTGGAAATAGAGCAACAGCTTAG  589

seq1  TGGATCCAGGTGAAGCTCTGACTTCTTCCTGGCTGTCCCTGATCTCAACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCAGGTGAAGCTCTGACTTCTTCCTGGCTGTCCCTGATCTCAACA  639

seq1  AAGTGTGAACAATAACAATAACAGGGGCCATGGTACAGTACCCTCAGGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGAACAATAACAATAACAGGGGCCATGGTACAGTACCCTCAGGAG  689

seq1  CCAAGATGGATGGACACATTGGAAATCTTACTAGGAAGTGTCGAGGCAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGGATGGACACATTGGAAATCTTACTAGGAAGTGTCGAGGCAAA  739

seq1  GACAGACCATTAACCTCACCCCAGTGGTCCTGGCCTTGACCATGAAAACC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACCATTAACCTCACCCCAGTGGTCCTGGCCTTGACCATGAAAACC  789

seq1  TGTGTTTTGTACTCAGTGTTAAAGAAGCCAGAGGATTCATGTTTCTAATT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTGTACTCAGTGTTAAAGAAGCCAGAGGATTCATGTTTCTAATT  839

seq1  GAAAAGGGCAGTGTGCATCTACAGCACTCAACCTGGCCCTGGTGACCTGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGGCAGTGTGCATCTACAGCACTCAACCTGGCCCTGGTGACCTGC  889

seq1  CCTGCTTTTAAGGGTGTTTAATAGGCATGATTCTTCTCCCTTGGGGAAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTTTAAGGGTGTTTAATAGGCATGATTCTTCTCCCTTGGGGAAAG  939

seq1  AGGAATAGTGAATGAAAAGTATATATTGAAATTCTTGGTGTGCACTCTAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGTGAATGAAAAGTATATATTGAAATTCTTGGTGTGCACTCTAT  989

seq1  TTTATTTTTATACCATGGCATGTCAAGGCAGGTGCACAGATGTTCATGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTATACCATGGCATGTCAAGGCAGGTGCACAGATGTTCATGCT  1039

seq1  GCTGTCAATACAGAAGACACACAGAAGAGCCACAACGGCCCAATGCCCGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAATACAGAAGACACACAGAAGAGCCACAACGGCCCAATGCCCGG  1089

seq1  GAGCAGAGGCCCGGGCTGAGTGAATTC  1124
      ||||||||||||||| |||||||||||
seq2  GAGCAGAGGCCCGGGATGAGTGAATTC  1116