BAC Information

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BAC

Clone NameB6Ng01-078J23
Chromosome7 (Build37)
Map Location 58,014,428 - 58,196,592
singlet/doubletdoublet
Overlap geneNell1, EG668766
Upstream geneHtatip2, Prmt3, Slc6a5, 4933405O20Rik
Downstream geneEG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078J23.bB6Ng01-078J23.g
ACCDH894269DH894270
length8661,087
definitionDH894269|Mus musculus domesticus DNA, BAC clone: B6Ng01-078J23, 5' end.DH894270|Mus musculus domesticus DNA, BAC clone: B6Ng01-078J23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,195,723 - 58,196,592)(58,014,428 - 58,015,510)
sequence
gaattctatagagagcaaaaacgactaaaggaagagtctaaatttcccta
tagtgggtcatcgtattcaagaagttcatacactgactcaaagtcaaggt
ctggctcaacacattcacgctcttactctcagtccttcagctgctcacac
tctcgatcttcttcacgatcatccccatcctccagaagaggcagaggcaa
gatctgcaatgattgttcacagtccagatctcatggatatcgcccatcta
ggtcaaggtcccctccctatagacgatatcgctcacggtccagatctcct
ccagcatttaggggacagtctcccactaaactcgatgtacctcgagaaga
gaaagaacgctaccaggaatgggagaggaaatactaccagtggtatgaga
gtaggcaaagggcaagcagtaggaacacagcctagaccctaggccaatag
agaggacttttcttcagagagactcttacctcctgatatcagaaattcac
ccttcacaagagggcacagagaagactatgctgctggacaaagtcataga
aatagaagtctaggtgggaactgtccagtaaagctttcaacaagagacag
tcacaatccaaaagataatccaaaatcgaaagagaagaagagtcagaatg
ttcctggagacagcaaaggaaacaagaatatgttggacatcggtgggagg
agaggcccttgggggtgtactgtcacagagacagggggaggggtgataag
ataggggggtgtctggaagggagacctggaaaggggaatgcatttgtaat
gaaataagtatatactcaattccaacatctgtttacctggggttttctgc
ttctttcgtgagtgtt
gaattcctattaaaaataaaaataagacaacacatttgtctcacctagag
ttgctataaaaacagtttgttggtgatttattttctggactttgcctaaa
aatatctgtattcagacttcattctggggaagtaattccactgggaacag
aaaatgtattttcttatttatttaaatgtgttttgtttttgaagacatgg
tttctcagtgtagctctggctgccctggacccagctctacagaccaggtt
agcctcaaaatctgagctctacctgcctctgtctcctaagtgctaagatt
aaagacacgagccagcaccacctggcaataaatgtaccttcttatctttc
tggtttgataatttttgaagtgaaatctgtgtagtttctaatgggtgcca
ttttgagattccattatggctgtaacctgtttgggtgagctgtgccttgc
cagggttttctctatgttgcttcaggtttgatctgtagagttttttaggt
atcttacatcattgtttcccttaatgttgaaaggttctgcatcattgcct
aggtattatttcttctttgaatattttgtttccatttatatcctttacca
tgtttcccttcagaacttaagtcctctttatgagatcctggtatatggtc
atatacttacttctctgtatgctatactgagaattttaatataatcttct
gtaggctatactggtatgttgtcatatgctttggtgagactccagctatt
ctcattgctctaccatagatagactctttctgtgacttccgtttcactaa
ctaatcactttggaaaatctaatctgctgtatgatgggatgtattatggc
attgtggctctggtattaaaggatactgtgagaagtatactgactaattt
ctcccttacatagatggatctcaattgtagactagctattgtttagaacc
tgaaatagttgcttggaaatttagcacgtaaatttctttttacattattt
tattctatgggttgcatggggaaagaataattctttttgattgggtaaca
cttattcctcaggtagaagtccgatggcctttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58195723_58196592
seq2: B6Ng01-078J23.b_45_910 (reverse)

seq1  ATCACTCACTGAAAGAAAGACAGAAAAACACAGGTAAACAGGTGTTGGAA  50
      | ||||||| |||||||   ||||||| | ||||||||||| ||||||||
seq2  AACACTCAC-GAAAGAA--GCAGAAAACCCCAGGTAAACAGATGTTGGAA  47

seq1  TTGAGTATTTACTTTATTTACATTACAAATGCATTCCCCTTTCCAGGTCT  100
      |||||||| ||| |||||| ||||||||||||||||||||||||||||||
seq2  TTGAGTATATAC-TTATTT-CATTACAAATGCATTCCCCTTTCCAGGTCT  95

seq1  CCCCTCCAGACA-CCCCCTATCTTATCACCCCTCCCCCTGTCTCTGTGAC  149
      ||| |||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCAGACACCCCCCTATCTTATCACCCCTCCCCCTGTCTCTGTGAC  145

seq1  AGTACACCCCCAAGGGCCTCTCCTCCCACCGATGTCCAACATATTCTTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACCCCCAAGGGCCTCTCCTCCCACCGATGTCCAACATATTCTTGT  195

seq1  TTCCTTTGCTGTCTCCAGGAACATTCTGACTCTTCTTCTCTTTCGATTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGCTGTCTCCAGGAACATTCTGACTCTTCTTCTCTTTCGATTTT  245

seq1  GGATTATCTTTTGGATTGTGACTGTCTCTTGTTGAAAGCTTTACTGGACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATCTTTTGGATTGTGACTGTCTCTTGTTGAAAGCTTTACTGGACA  295

seq1  GTTCCCACCTAGACTTCTATTTCTATGACTTTGTCCAGCAGCATAGTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCACCTAGACTTCTATTTCTATGACTTTGTCCAGCAGCATAGTCTT  345

seq1  CTCTGTGCCCTCTTGTGAAGGGTGAATTTCTGATATCAGGAGGTAAGAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCCCTCTTGTGAAGGGTGAATTTCTGATATCAGGAGGTAAGAGT  395

seq1  CTCTCTGAAGAAAAGTCCTCTCTATTGGCCTAGGGTCTAGGCTGTGTTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAAGAAAAGTCCTCTCTATTGGCCTAGGGTCTAGGCTGTGTTCC  445

seq1  TACTGCTTGCCCTTTGCCTACTCTCATACCACTGGTAGTATTTCCTCTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTTGCCCTTTGCCTACTCTCATACCACTGGTAGTATTTCCTCTCC  495

seq1  CATTCCTGGTAGCGTTCTTTCTCTTCTCGAGGTACATCGAGTTTAGTGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGGTAGCGTTCTTTCTCTTCTCGAGGTACATCGAGTTTAGTGGG  545

seq1  AGACTGTCCCCTAAATGCTGGAGGAGATCTGGACCGTGAGCGATATCGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTCCCCTAAATGCTGGAGGAGATCTGGACCGTGAGCGATATCGTC  595

seq1  TATAGGGAGGGGACCTTGACCTAGATGGGCGATATCCATGAGATCTGGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGAGGGGACCTTGACCTAGATGGGCGATATCCATGAGATCTGGAC  645

seq1  TGTGAACAATCATTGCAGATCTTGCCTCTGCCTCTTCTGGAGGATGGGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACAATCATTGCAGATCTTGCCTCTGCCTCTTCTGGAGGATGGGGA  695

seq1  TGATCGTGAAGAAGATCGAGAGTGTGAGCAGCTGAAGGACTGAGAGTAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCGTGAAGAAGATCGAGAGTGTGAGCAGCTGAAGGACTGAGAGTAAG  745

seq1  AGCGTGAATGTGTTGAGCCAGACCTTGACTTTGAGTCAGTGTATGAACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGAATGTGTTGAGCCAGACCTTGACTTTGAGTCAGTGTATGAACTT  795

seq1  CTTGAATACGATGACCCACTATAGGGAAATTTAGACTCTTCCTTTAGTCG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATACGATGACCCACTATAGGGAAATTTAGACTCTTCCTTTAGTCG  845

seq1  TTTTTGCTCTCTATAGAATTC  870
      |||||||||||||||||||||
seq2  TTTTTGCTCTCTATAGAATTC  866

seq1: chr7_58014428_58015510
seq2: B6Ng01-078J23.g_68_1154

seq1  GAATTCCTATTAAAAATAAAAATAAGACAACACATTTGTCTCACCTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTAAAAATAAAAATAAGACAACACATTTGTCTCACCTAGAG  50

seq1  TTGCTATAAAAACAGTTTGTTGGTGATTTATTTTCTGGACTTTGCCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATAAAAACAGTTTGTTGGTGATTTATTTTCTGGACTTTGCCTAAA  100

seq1  AATATCTGTATTCAGACTTCATTCTGGGGAAGTAATTCCACTGGGAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGTATTCAGACTTCATTCTGGGGAAGTAATTCCACTGGGAACAG  150

seq1  AAAATGTATTTTCTTATTTATTTAAATGTGTTTTGTTTTTGAAGACATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTATTTTCTTATTTATTTAAATGTGTTTTGTTTTTGAAGACATGG  200

seq1  TTTCTCAGTGTAGCTCTGGCTGCCCTGGACCCAGCTCTACAGACCAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTGTAGCTCTGGCTGCCCTGGACCCAGCTCTACAGACCAGGTT  250

seq1  AGCCTCAAAATCTGAGCTCTACCTGCCTCTGTCTCCTAAGTGCTAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAAAATCTGAGCTCTACCTGCCTCTGTCTCCTAAGTGCTAAGATT  300

seq1  AAAGACACGAGCCAGCACCACCTGGCAATAAATGTACCTTCTTATCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACACGAGCCAGCACCACCTGGCAATAAATGTACCTTCTTATCTTTC  350

seq1  TGGTTTGATAATTTTTGAAGTGAAATCTGTGTAGTTTCTAATGGGTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGATAATTTTTGAAGTGAAATCTGTGTAGTTTCTAATGGGTGCCA  400

seq1  TTTTGAGATTCCATTATGGCTGTAACCTGTTTGGGTGAGCTGTGCCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGATTCCATTATGGCTGTAACCTGTTTGGGTGAGCTGTGCCTTGC  450

seq1  CAGGGTTTTCTCTATGTTGCTTCAGGTTTGATCTGTAGAGTTTTTTAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTTCTCTATGTTGCTTCAGGTTTGATCTGTAGAGTTTTTTAGGT  500

seq1  ATCTTACATCATTGTTTCCCTTAATGTTGAAAGGTTCTGCATCATTGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACATCATTGTTTCCCTTAATGTTGAAAGGTTCTGCATCATTGCCT  550

seq1  AGGTATTATTTCTTCTTTGAATATTTTGTTTCCATTTATATCCTTTACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTATTTCTTCTTTGAATATTTTGTTTCCATTTATATCCTTTACCA  600

seq1  TGTTTCCCTTCAGAACTTAAGTCCTCTTTATGAGATCCTGGTATATGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCCTTCAGAACTTAAGTCCTCTTTATGAGATCCTGGTATATGGTC  650

seq1  ATATACTTACTTCTCTGTATGCTATACTGAGAATTTTAATATAATCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTACTTCTCTGTATGCTATACTGAGAATTTTAATATAATCTTCT  700

seq1  GTAGGCTATACTGGTATGTTGTCATATGCTTTGGTGAGACTCCAGCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTATACTGGTATGTTGTCATATGCTTTGGTGAGACTCCAGCTATT  750

seq1  CTCATTGCTCTACCATAGATAGACTCTTTCTGTGACTTCCGTTTCACTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGCTCTACCATAGATAGACTCTTTCTGTGACTTCCGTTTCACTAA  800

seq1  CTAATCAC-TTGGAAAATCTAATCTGCTGTATGATGGGATGTATTATGGC  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCACTTTGGAAAATCTAATCTGCTGTATGATGGGATGTATTATGGC  850

seq1  ATTGTGGCTCTGGTATTAAAGGATACTGTGAGAAGTTATACTGACTAATT  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTGTGGCTCTGGTATTAAAGGATACTGTGAGAAG-TATACTGACTAATT  899

seq1  TCTCCCTTACATAGATGGATCTCAATTGTAGACTAGCTATTGTTTAGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTACATAGATGGATCTCAATTGTAGACTAGCTATTGTTTAGAAC  949

seq1  CTGAAATAGTTGCTTTGCAAATTTAGCACGTAAATTTC-TTTTACATTA-  997
      ||||||||||||| ||| |||||||||||||||||||| |||||||||| 
seq2  CTGAAATAGTTGC-TTGGAAATTTAGCACGTAAATTTCTTTTTACATTAT  998

seq1  TTTATTCTATGGTTTGCATGGGGAAAGAAT-ATTC-TTTTGATTGGGGTA  1045
      |||||||||||| ||||||||||||||||| |||| |||||||| |||||
seq2  TTTATTCTATGGGTTGCATGGGGAAAGAATAATTCTTTTTGATT-GGGTA  1047

seq1  ACAC-TATTCTCTAGGTAG-AGTCTGATGGCATTTTTTTT  1083
      |||| |||||   |||||| |||| |||||| ||||||||
seq2  ACACTTATTCCTCAGGTAGAAGTCCGATGGCCTTTTTTTT  1087