BAC Information

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BAC

Clone NameB6Ng01-079P03
Chromosome7 (Build37)
Map Location 67,027,973 - 67,122,261
singlet/doubletdoublet
Overlap geneLOC664788
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneSnrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079P03.bB6Ng01-079P03.g
ACCDH895215DH895216
length1,1291,202
definitionDH895215|Mus musculus domesticus DNA, BAC clone: B6Ng01-079P03, 5' end.DH895216|Mus musculus domesticus DNA, BAC clone: B6Ng01-079P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,027,973 - 67,029,113)(67,121,040 - 67,122,261)
sequence
tgggaagcaggcttcattttcacagctgaaaggaacccccctctctctcc
ctctctctgtgttagtgtgtgtgtgtgtgtgtgtgtgtgtgtcttttacc
ctgagacattccttgctgtggcagccagtccctatttctgtccacctgtc
cagtgctcattttgtctgttgtgaagacttccacctctctcatgagattg
cttttggccatccacccctgctttgatctcttctggtaaaaagttctcag
actatactgctcagcttctcacactaatgaaaatcccattgtgcagaact
atcacaggccaggatccgacttgactcaagttatcttagtgtgtcaaatg
cagtctgcatccaagaacttattttctccctgatgattcccatgagcatg
gctctcaaggtggatttgcaaaacacgatgtgccctgttgaaacctcctt
cctatgcacactagcaacgtgtctttccagaagagttaggccaaaacatc
gaaaagaaaggtcccatgacaccttggtctctaatttagagggtccctca
ccaagatggttctcctaaggctgtgggtgcaagaactgttcctagacttt
ccctttgaccttgccaaggaggctgacaacaatgtccaaatataccaagg
atatcccttcaacaacatccaaagcaacagcacctaccaaagaggagatt
cctacaaaaattatttcaacaaatctatggagacacaggtctgcaagtct
catgctgccagcgagtccatcaaagtttcatccgtctacagacacaggta
aatgtgtaaatgtggtacaaactgacccgtgaggtgcctgccatcacctc
caaggcttagctccttctctatttcctagcaacccccctgggaaacatcc
aagctgccagggacacagagccttctgttcaccacctgaatgacaacagt
cacacagtcccatttacatgctactgggtcaagctacactctacagcagc
ctgcattctattgactacgtaaagcaatgcacaggtaaattcatataagt
gcttctgaaagcctggattccactgctgatttcccatctgaaggccaaga
tagtgccactgcactgctaactttgcctc
gaattcctgtagtattataatcttggttagtgtggctttctttcaatgaa
cagtttttattaatttttttaacctttgttactatggagttttgttcagc
atgctttgtaaatagaattcttggttcttcagagaatcttatgttacttt
atataagagaagtttttttgtcatgatacaattacaaaatacatcctgtt
atgacatctactgttatatagcataacattggcctacatacccaatagtg
caccatgttaatttaatcttgtgaagaaaagtaatggattgtgttttgca
agatacttaatgataatgaaatttctagacaaacaaattacaaaattact
agaatgcttgttctggaatttctagactttctagttttatggcaagtaaa
gaaaattcatgacataaaaccatttgtaaggggtgatctatgtgacaact
tcacatagttttactccaataagaagttaataaatattgtgagtgaattc
aatgttaacacactatacccttaatatgctaatacatatctaaaagatac
aaaatcatttaaattgaataagaaatttctggccaactttgttttcagat
ttattttatatacaaatacacagttatttatatcacagaaaaatttttat
attttaaattggaattggacactgaaataaaagattagaactttggtggt
caacagaatatatttatatggattcttaagtagtatgatacagcaacatt
tctctgttaagggttaattaggaaatgctaagcagaggaaaggtattctt
tttttaaattgggatttgctggatcatactttgaaattgccaatttagtc
aagcccatctgtcagtctaactttcagcttgtttttgcctgtatttattt
taaatcagacctgacagattgataactgaaaataatagagttctatcttt
gtagaaacaaagtaccttcaactgccaaaacacatggcattactctatat
gtttaatgagtggatgttttgactgtggtagtgacttggttaaagaactt
gcttaatagaagacatgttaaccataatttcttgtatttatgggatagct
gattaaaaccttgcccagtttcaagtttagtgtccgtatgaagacactct
ttattggcgttaagttatctggacctatggtaaggctcattgtgtggtgg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67027973_67029113
seq2: B6Ng01-079P03.b_61_1189

seq1  TGGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCC  50

seq1  CTCTCTCTGTGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTGTGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTTACC  100

seq1  CTGAGACATTCCTTGCTGTGGCAGCCAGTCCCTATTTCTGTCCACCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACATTCCTTGCTGTGGCAGCCAGTCCCTATTTCTGTCCACCTGTC  150

seq1  CAGTGCTCATTTTGTCTGTTGTGAAGACTTCCACCTCTCTCATGAGATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCATTTTGTCTGTTGTGAAGACTTCCACCTCTCTCATGAGATTG  200

seq1  CTTTTGGCCATCCACCCCTGCTTTGATCTCTTCTGGTAAAAAGTTCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGCCATCCACCCCTGCTTTGATCTCTTCTGGTAAAAAGTTCTCAG  250

seq1  ACTATACTGCTCAGCTTCTCACACTAATGAAAATCCCATTGTGCAGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACTGCTCAGCTTCTCACACTAATGAAAATCCCATTGTGCAGAACT  300

seq1  ATCACAGGCCAGGATCCGACTTGACTCAAGTTATCTTAGTGTGTCAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGCCAGGATCCGACTTGACTCAAGTTATCTTAGTGTGTCAAATG  350

seq1  CAGTCTGCATCCAAGAACTTATTTTCTCCCTGATGATTCCCATGAGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGCATCCAAGAACTTATTTTCTCCCTGATGATTCCCATGAGCATG  400

seq1  GCTCTCAAGGTGGATTTGCAAAACACGATGTGCCCTGTTGAAACCTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCAAGGTGGATTTGCAAAACACGATGTGCCCTGTTGAAACCTCCTT  450

seq1  CCTATGCACACTAGCAACGTGTCTTTCCAGAAGAGTTAGGCCAAAACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCACACTAGCAACGTGTCTTTCCAGAAGAGTTAGGCCAAAACATC  500

seq1  GAAAAGAAAGGTCCCATGACACCTTGGTCTCTAATTTAGAGGGTCCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAGGTCCCATGACACCTTGGTCTCTAATTTAGAGGGTCCCTCA  550

seq1  CCAAGATGGTTCTCCTAAGGCTGTGGGTGCAAGAACTGTTCCTAGACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGGTTCTCCTAAGGCTGTGGGTGCAAGAACTGTTCCTAGACTTT  600

seq1  CCCTTTGACCTTGCCAAGGAGGCTGACAACAATGTCCAAATATACCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGACCTTGCCAAGGAGGCTGACAACAATGTCCAAATATACCAAGG  650

seq1  ATATCCCTTCAACAACATCCAAAGCAACAGCACCTACCAAAGAGGAGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCTTCAACAACATCCAAAGCAACAGCACCTACCAAAGAGGAGATT  700

seq1  CCTACAAAAATTATTTCAACAAATCTATGGAGACACAGGTCTGCAAGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAAAAATTATTTCAACAAATCTATGGAGACACAGGTCTGCAAGTCT  750

seq1  CATGCTGCCAGCGAGTCCATCAAAGTTTCATCCGTCTACAGACACAGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGCCAGCGAGTCCATCAAAGTTTCATCCGTCTACAGACACAGGTA  800

seq1  AATGTGTAAATGTGGTACAAACTGACCCGTGAGGTGCCTGCCATCACCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTAAATGTGGTACAAACTGACCCGTGAGGTGCCTGCCATCACCTC  850

seq1  CAAGGCTTAGCTCCTTCTCTATTTCCTAGCAACCCCCCTGGGAAACATCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTAGCTCCTTCTCTATTTCCTAGCAACCCCCCTGGGAAACATCC  900

seq1  AAGCTGCCAGGGACACAGAGCCTTCTGTTCACCACCTGAAATGACAACAG  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGCTGCCAGGGACACAGAGCCTTCTGTTCACCACCTG-AATGACAACAG  949

seq1  TCACACAGTCCCATTTACATGCTACTGGGTCAAGCTACACTCTACCAGCA  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCACACAGTCCCATTTACATGCTACTGGGTCAAGCTACACTCTA-CAGCA  998

seq1  GCCTGCATTCTATTGACTACGTAAAGCAATGCAACAGGGTTAAAATTCAT  1050
      |||||||||||||||||||||||||||||||| |||||    ||||||||
seq2  GCCTGCATTCTATTGACTACGTAAAGCAATGC-ACAGG---TAAATTCAT  1044

seq1  ATAAGTGCTTCTGAGAAGCCT-GAGTCCACTGCTTGATATTCCCATCTGA  1099
      |||||||||||||| |||||| || |||||||| |||| |||||||||| 
seq2  ATAAGTGCTTCTGA-AAGCCTGGATTCCACTGC-TGAT-TTCCCATCTG-  1090

seq1  AAAGCCAAGATTTGGTGCCACTGCCACTGCTACTTTTGCCTC  1141
      || |||||||  | ||||||||| ||||||||  ||||||||
seq2  AAGGCCAAGA--TAGTGCCACTG-CACTGCTAACTTTGCCTC  1129

seq1: chr7_67121040_67122261
seq2: B6Ng01-079P03.g_69_1270 (reverse)

seq1  CACCAC--CACAATGAGCCTTACATAAATGTCCAG-TAACATTTAACAGC  47
      ||||||  |||||||||||||||  | | |||||| ||||  |||||  |
seq2  CACCACCACACAATGAGCCTTAC-CATAGGTCCAGATAAC--TTAACGCC  47

seq1  AAAAATAAAGATGTCTTTTCATACAGAACAACTTAAAAACCTGAAAACTG  97
         |||||||| || | ||||||| ||   |||   |||| || ||||||
seq2  ---AATAAAGA-GTGTCTTCATACGGA--CACT---AAACTTG-AAACTG  87

seq1  GCCAAATGTTTTTAAATACAGCTAT-CCATAAATACAAGAAATATAATGT  146
      | |||  | ||||||   ||||||| |||||||||||||||  || ||| 
seq2  GGCAA--GGTTTTAA--TCAGCTATCCCATAAATACAAGAA--ATTATG-  130

seq1  GTTAACATGGTCTCTATTAAGCAAGTTCTTTAAACAAAGTCACTACACAC  196
      |||||||||   ||||||||||||||||||| ||| |||||||||| |||
seq2  GTTAACATGTCTTCTATTAAGCAAGTTCTTT-AACCAAGTCACTAC-CAC  178

seq1  AGTTCAAACATTCTACTCATTAAACATATAGAGTAATGCCATGTGTTTTT  246
      |||  ||||| || ||||||||||||||||||||||||||||||| ||||
seq2  AGTCAAAACA-TCCACTCATTAAACATATAGAGTAATGCCATGTG-TTTT  226

seq1  GGCAGTTGAAGGTACTTTTGTTTCTACAAAGATAGGACTCTATTATTTTT  296
      ||||||||||||||| ||||||||||||||||||| ||||||||| ||||
seq2  GGCAGTTGAAGGTAC-TTTGTTTCTACAAAGATAGAACTCTATTA-TTTT  274

seq1  CAGTTATCAATCCTGTCAGGTCTGATTTAAAATAAATACAGGCAAAAACA  346
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATCAAT-CTGTCAGGTCTGATTTAAAATAAATACAGGCAAAAACA  323

seq1  AGCTGAAAGTTAGACTGACAGATGGGCTTGACTAAATTGGCAATTTCAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGTTAGACTGACAGATGGGCTTGACTAAATTGGCAATTTCAAA  373

seq1  GTATGATCCAGC-AATTCCAATTT-AAAAAAGAATACCTTTCCTCTGCTT  444
      |||||||||||| ||| ||||||| |||||||||||||||||||||||||
seq2  GTATGATCCAGCAAATCCCAATTTAAAAAAAGAATACCTTTCCTCTGCTT  423

seq1  AGCATTTCCTAATTAACCCTTAACAGAGAAATGTTGCTGTATCATACTAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCCTAATTAACCCTTAACAGAGAAATGTTGCTGTATCATACTAC  473

seq1  TTAAGAATCCATAT-AATATATTCTGTTGACCACCAAAGTTCTAATCTTT  543
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTAAGAATCCATATAAATATATTCTGTTGACCACCAAAGTTCTAATCTTT  523

seq1  TATTTCAGTGTCCAATTCCAATTTAAAATATAAAAATTTTTCTGTGATAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGTGTCCAATTCCAATTTAAAATATAAAAATTTTTCTGTGATAT  573

seq1  AAATAACTGTGTATTTGTATATAAAATAAATCTGAAAACAAAGTTGGCCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTGTGTATTTGTATATAAAATAAATCTGAAAACAAAGTTGGCCA  623

seq1  GAAATTTCTTATTCAATTTAAATGATTTTGTATCTTTTAGATATGTATTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCTTATTCAATTTAAATGATTTTGTATCTTTTAGATATGTATTA  673

seq1  GCATATTAAGGGTATAGTGTGTTAACATTGAATTCACTCACAATATTTAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTAAGGGTATAGTGTGTTAACATTGAATTCACTCACAATATTTAT  723

seq1  TAACTTCTTATTGGAGTAAAACTATGTGAAGTTGTCACATAGATCACCCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTTATTGGAGTAAAACTATGTGAAGTTGTCACATAGATCACCCC  773

seq1  TTACAAATGGTTTTATGTCATGAATTTTCTTTACTTGCCATAAAACTAGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATGGTTTTATGTCATGAATTTTCTTTACTTGCCATAAAACTAGA  823

seq1  AAGTCTAGAAATTCCAGAACAAGCATTCTAGTAATTTTGTAATTTGTTTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAGAAATTCCAGAACAAGCATTCTAGTAATTTTGTAATTTGTTTG  873

seq1  TCTAGAAATTTCATTATCATTAAGTATCTTGCAAAACACAATCCATTACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAATTTCATTATCATTAAGTATCTTGCAAAACACAATCCATTACT  923

seq1  TTTCTTCACAAGATTAAATTAACATGGTGCACTATTGGGTATGTAGGCCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCACAAGATTAAATTAACATGGTGCACTATTGGGTATGTAGGCCA  973

seq1  ATGTTATGCTATATAACAGTAGATGTCATAACAGGATGTATTTTGTAATT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATGCTATATAACAGTAGATGTCATAACAGGATGTATTTTGTAATT  1023

seq1  GTATCATGACAAAAAAACTTCTCTTATATAAAGTAACATAAGATTCTCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATGACAAAAAAACTTCTCTTATATAAAGTAACATAAGATTCTCTG  1073

seq1  AAGAACCAAGAATTCTATTTACAAAGCATGCTGAACAAAACTCCATAGTA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAAGAATTCTATTTACAAAGCATGCTGAACAAAACTCCATAGTA  1123

seq1  ACAAAGGTTAAAAAAATTAATAAAAACTGTTCATTGAAAGAAAGCCACAC  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTTAAAAAAATTAATAAAAACTGTTCATTGAAAGAAAGCCACAC  1173

seq1  TAACCAAGATTATAATACTACAGGAATTC  1222
      |||||||||||||||||||||||||||||
seq2  TAACCAAGATTATAATACTACAGGAATTC  1202