BAC Information

Click to search

BAC

Clone NameB6Ng01-080J01
Chromosome7 (Build37)
Map Location 122,212,489 - 122,213,617
singlet/doubletsinglet
Overlap genenone
Upstream geneRras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967
Downstream geneLOC668472, Sox6, LOC100042779, 1110006G14Rik, EG668479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080J01.b
ACCDH895668
length1,133
definitionDH895668|Mus musculus domesticus DNA, BAC clone: B6Ng01-080J01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagccagtgccctatctaccaaaaacctatatctctaagccct
agtacttaccttttattttgagctagcatcttactaaggtgcctagttta
gccttaaactaatcccatagccgaaacaggtcataggcttgcaattccct
ggcatcagcctgcagagtagctggggttataggcctagaccatccatcca
tccctgttagtgactggtatttatgatctacctgccatatactttgtctc
tatctctcaaatagtcttgtggagtgtttttcactcagattgttagaact
caactgttataggctgttcatgtgctcaagggtaccagcctaccttcatg
tatctccgttggtgaccctaattcagtaggagacttactatctagctggc
tctctaaagagttaatgatacttgcatgtattcctttacagtttgtatac
attttatttctttttagcgatctaagtactgagtttatatatcactgcag
tgcatactcaggattgttccttcctcagaaaataaacacatgggctgcgg
tagctgtaggctcttgacacgctcagtgagactggaagcactatacagca
tatagcgtctctcttaacttcaaggcctgggtctctagtgggaagtatct
ggtattaacaatggccctgggctagtttgggttgtagcctaatctttgtt
tctgaattgatggtacatggctgtaatatttttacctctgtggatttcag
cattttcctccgtgatactaaaataattatgtctgccttgattaactccc
agggtagttgtgaaagatccaaagatgtgtgaatgtatttcaaaaagtta
taaagtaacatacaaatgcatgatgttcatattattaaatttaatgctaa
tcaaagtaattgggtaggacccaaaatgatactgagaaatgaaaccattt
taagtattggtcagatgtttagcactacccagttaactcctgaagtttta
catcaggaaataatttggggctgttggctgctactgaagggtgaattcag
atttttagaagtgtctagtggatgctgaataggatagatgtgaacaggta
tcttcctgtgccctagaacatgggccaaactta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_122212489_122213617
seq2: B6Ng01-080J01.b_46_1178

seq1  GAATTCTCAGCCAGTGCCCTATCTACCAAAAACCTATATCTCTAAGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCAGTGCCCTATCTACCAAAAACCTATATCTCTAAGCCCT  50

seq1  AGTACTTACCTTTTATTTTGAGCTAGCATCTTACTAAGGTGCCTAGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTACCTTTTATTTTGAGCTAGCATCTTACTAAGGTGCCTAGTTTA  100

seq1  GCCTTAAACTAATCCCATAGCCGAAACAGGTCATAGGCTTGCAATTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAAACTAATCCCATAGCCGAAACAGGTCATAGGCTTGCAATTCCCT  150

seq1  GGCATCAGCCTGCAGAGTAGCTGGGGTTATAGGCCTAGACCATCCATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGCCTGCAGAGTAGCTGGGGTTATAGGCCTAGACCATCCATCCA  200

seq1  TCCCTGTTAGTGACTGGTATTTATGATCTACCTGCCATATACTTTGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTAGTGACTGGTATTTATGATCTACCTGCCATATACTTTGTCTC  250

seq1  TATCTCTCAAATAGTCTTGTGGAGTGTTTTTCACTCAGATTGTTAGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCAAATAGTCTTGTGGAGTGTTTTTCACTCAGATTGTTAGAACT  300

seq1  CAACTGTTATAGGCTGTTCATGTGCTCAAGGGTACCAGCCTACCTTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTTATAGGCTGTTCATGTGCTCAAGGGTACCAGCCTACCTTCATG  350

seq1  TATCTCCGTTGGTGACCCTAATTCAGTAGGAGACTTACTATCTAGCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCGTTGGTGACCCTAATTCAGTAGGAGACTTACTATCTAGCTGGC  400

seq1  TCTCTAAAGAGTTAATGATACTTGCATGTATTCCTTTACAGTTTGTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAAAGAGTTAATGATACTTGCATGTATTCCTTTACAGTTTGTATAC  450

seq1  ATTTTATTTCTTTTTAGCGATCTAAGTACTGAGTTTATATATCACTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTCTTTTTAGCGATCTAAGTACTGAGTTTATATATCACTGCAG  500

seq1  TGCATACTCAGGATTGTTCCTTCCTCAGAAAATAAACACATGGGCTGCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACTCAGGATTGTTCCTTCCTCAGAAAATAAACACATGGGCTGCGG  550

seq1  TAGCTGTAGGCTCTTGACACGCTCAGTGAGACTGGAAGCACTATACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTAGGCTCTTGACACGCTCAGTGAGACTGGAAGCACTATACAGCA  600

seq1  TATAGCGTCTCTCTTAACTTCAAGGCCTGGGTCTCTAGTGGGAAGTATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCGTCTCTCTTAACTTCAAGGCCTGGGTCTCTAGTGGGAAGTATCT  650

seq1  GGTATTAACAATGGCCCTGGGCTAGTTTGGGTTGTAGCCTAATCTTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTAACAATGGCCCTGGGCTAGTTTGGGTTGTAGCCTAATCTTTGTT  700

seq1  TCTGAATTGATGGTACATGGCTGTAATA-TTTTACCTCTGTGGATTTCAG  749
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTGAATTGATGGTACATGGCTGTAATATTTTTACCTCTGTGGATTTCAG  750

seq1  CATTTTCCTCCGTGATACTAAAATAATTATGTCTGCCTTGATTAACTCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCTCCGTGATACTAAAATAATTATGTCTGCCTTGATTAACTCCC  800

seq1  AGGGTAGTTGTG-AAGATCCAAAGATGTGTGAATGTATTTCAAAAAGTTA  848
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGTTGTGAAAGATCCAAAGATGTGTGAATGTATTTCAAAAAGTTA  850

seq1  TAAAGTAACATACAAATGCATGATGTTCATATTATTAAATTTAATGCTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAACATACAAATGCATGATGTTCATATTATTAAATTTAATGCTAA  900

seq1  TCAAAGTAATTGGGTAGGAACCAAAATGATACTGAGAAATG-AACCATTT  947
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  TCAAAGTAATTGGGTAGGACCCAAAATGATACTGAGAAATGAAACCATTT  950

seq1  TAAGTATTGGTCAGATG-TTAGCACTACCCAGTTAACTCCTGAAGTTTTT  996
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  TAAGTATTGGTCAGATGTTTAGCACTACCCAGTTAACTCCTGAAG-TTTT  999

seq1  ACATCAGGGAAATAATTTGGGGCTGTTGGCTGCTACTG-AGGGTGAATTC  1045
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  ACATCA-GGAAATAATTTGGGGCTGTTGGCTGCTACTGAAGGGTGAATTC  1048

seq1  AGA-TTTTAGAAGTGTCTAAGTGGATGCTGAATAGTATAGATGTGGACAG  1094
      ||| |||||||||||||| |||||||||||||||| ||||||||| ||||
seq2  AGATTTTTAGAAGTGTCT-AGTGGATGCTGAATAGGATAGATGTGAACAG  1097

seq1  TAATCTT-CTGTGCCTTAGAAACATGGG-CAAACTTA  1129
        ||||| ||||||| ||| |||||||| ||||||||
seq2  GTATCTTCCTGTGCCCTAG-AACATGGGCCAAACTTA  1133