BAC Information

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BAC

Clone NameB6Ng01-080J06
Chromosome7 (Build37)
Map Location 143,364,108 - 143,514,808
singlet/doubletdoublet
Overlap genenone
Upstream geneDock1, LOC100043254, Foxi2, Clrn3, Ptpre, Mki67, LOC668764
Downstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804, Ebf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080J06.bB6Ng01-080J06.g
ACCDH895677DH895678
length482889
definitionDH895677|Mus musculus domesticus DNA, BAC clone: B6Ng01-080J06, 5' end.DH895678|Mus musculus domesticus DNA, BAC clone: B6Ng01-080J06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,514,321 - 143,514,808)(143,364,108 - 143,364,997)
sequence
aaaagtacatgacaaggcccttcagaggatgtatcacagtcatttttttc
cccatttgctagctgttgactctaagctcacgagaaaggtctaatttatt
tatttttcagtgtaacatgtgtgtgtttatataaaatataaacataaaca
cattatttacctgtatttgcataagaaaaaaagaaagataggtagataga
taatagattttggaagaggttgcaagctaatgaatgtttttttcactcat
tttaaaggatggtatagatacccattgaatggatgtaccacaggcttccc
cagacagtgccatttaatgcaattaaaaaaaaaatagaatactataaaat
taactgcatttttgtttgtttgggttttgttttgctttgctttgctttac
aatcatgatgatgaatctcccagctgcctttctctaagtactctaagtag
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcaaccaatggatattttttccatttgtctgtgtcttcaatgtctt
ctatctacatttgacagtttcagtgttctgaatgattcttggtttggttt
tccagtaggtattgcatctttccctgatgaatctattataaaagtgttgc
tttcctttcttgttctctctctctctctctgtgtgtgtgtgtgtgtgtgt
gtgtatttacctgaggagatccagtacactggcaaattttagttgtcata
tatcaatggcagttacatgtatcaattttttattcaaataactaaattaa
tagccaattaaaaactttatatagatgctgaggattaatgaagaggaaat
ggggatgagaaaaatggaaaaccaaacagaacaagaagagaggaatatga
cagatatatatttgaacagaaaacacatagtaatgatccaaatatgtaga
agatggtagctcgtcagtgtggctgggctctcagggatgcccaataggaa
cttcctcgggaagtgaagggacagggaaggttttttccctccccatatgg
aaagaaagttaaagttattgctaatggaagaatgttatagaataggattt
agaaatcaggtgtgattttaagaaacttgtctcaagttcaggaagttgaa
caagaagttcaaaagttagaacctgaccatactaagagtggaacacatga
ccatcacaacctagcacaacttcagcacaaagccactggtacttaataat
acatgctataaaccatgataaaaaaaacaagtttccagaattaaataatt
attacatagacttcacctggtcagggatatgttgaagcctcatgggatca
tctgagaggactggtcccggggtgggaatggagtaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_143514321_143514808
seq2: B6Ng01-080J06.b_49_536 (reverse)

seq1  CACACACACACACACACACACACACACACACACTACTTAGAGTACTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACTACTTAGAGTACTTAGA  50

seq1  GAAAGGCAGCTGGGAGATTCATCATCATGATTGTAAAGCAAAGCAAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCAGCTGGGAGATTCATCATCATGATTGTAAAGCAAAGCAAAGCA  100

seq1  AAACAAAACCCAAACAAACAAAAATGCAGTTAATTTTATAGTATTCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACCCAAACAAACAAAAATGCAGTTAATTTTATAGTATTCTATT  150

seq1  TTTTTTTTAATTGCATTAAATGGCACTGTCTGGGGAAGCCTGTGGTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAATTGCATTAAATGGCACTGTCTGGGGAAGCCTGTGGTACAT  200

seq1  CCATTCAATGGGTATCTATACCATCCTTTAAAATGAGTGAAAAAAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAATGGGTATCTATACCATCCTTTAAAATGAGTGAAAAAAACATT  250

seq1  CATTAGCTTGCAACCTCTTCCAAAATCTATTATCTATCTACCTATCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTTGCAACCTCTTCCAAAATCTATTATCTATCTACCTATCTTTC  300

seq1  TTTTTTTCTTATGCAAATACAGGTAAATAATGTGTTTATGTTTATATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTTATGCAAATACAGGTAAATAATGTGTTTATGTTTATATTTT  350

seq1  ATATAAACACACACATGTTACACTGAAAAATAAATAAATTAGACCTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACACACACATGTTACACTGAAAAATAAATAAATTAGACCTTTCT  400

seq1  CGTGAGCTTAGAGTCAACAGCTAGCAAATGGGGAAAAAAATGACTGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGCTTAGAGTCAACAGCTAGCAAATGGGGAAAAAAATGACTGTGAT  450

seq1  ACATCCTCTGAAGGGCCTTGTCATGTACTTTTGAATTC  488
      ||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCTGAAGGGCCTTGTCATGTACTTTTGAATTC  488

seq1: chr7_143364108_143364997
seq2: B6Ng01-080J06.g_70_958

seq1  GAATTCAACCAATGGATATTTTTTCCATTTGTCTGTGTCTTCAATGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCAATGGATATTTTTTCCATTTGTCTGTGTCTTCAATGTCTT  50

seq1  CTATCTACATTTGACAGTTTCAGTGTTCTGAATGATTCTTGGTTTGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTACATTTGACAGTTTCAGTGTTCTGAATGATTCTTGGTTTGGTTT  100

seq1  TCCAGTAGGTATTGCATCTTTCCCTGATGAATCTATTATAAAAGTGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAGGTATTGCATCTTTCCCTGATGAATCTATTATAAAAGTGTTGC  150

seq1  TTTCCTTTCTTGTTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTCTTGTTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGT  200

seq1  GTGTATTTACCTGAGGAGATCCAGTACACTGGCAAATTTTAGTTGTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTACCTGAGGAGATCCAGTACACTGGCAAATTTTAGTTGTCATA  250

seq1  TATCAATGGCAGTTACATGTATCAATTTTTTATTCAAATAACTAAATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGGCAGTTACATGTATCAATTTTTTATTCAAATAACTAAATTAA  300

seq1  TAGCCAATTAAAAACTTTATATAGATGCTGAGGATTAATGAAGAGGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAATTAAAAACTTTATATAGATGCTGAGGATTAATGAAGAGGAAAT  350

seq1  GGGGATGAGAAAAATGGAAAACCAAACAGAACAAGAAGAGAGGAATATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGAGAAAAATGGAAAACCAAACAGAACAAGAAGAGAGGAATATGA  400

seq1  CAGATATATATTTGAACAGAAAACACATAGTAATGATCCAAATATGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATATATTTGAACAGAAAACACATAGTAATGATCCAAATATGTAGA  450

seq1  AGATGGTAGCTCGTCAGTGTGGCTGGGCTCTCAGGGATGCCCAATAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTAGCTCGTCAGTGTGGCTGGGCTCTCAGGGATGCCCAATAGGAA  500

seq1  CTTCCTCGGGAAGTGAAGGGACAGGGAAGGTTTTTTCCCTCCCCATATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCGGGAAGTGAAGGGACAGGGAAGGTTTTTTCCCTCCCCATATGG  550

seq1  -AAGAAAGTTAAAGTTATTGCTAATGGAAGAATGTTATAGAATAGGATTT  599
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGTTAAAGTTATTGCTAATGGAAGAATGTTATAGAATAGGATTT  600

seq1  AGAAATCAGGTGTGATTTTAAGAAACTTGTCTCAAGTTCAGGAAGTTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAGGTGTGATTTTAAGAAACTTGTCTCAAGTTCAGGAAGTTGAA  650

seq1  CAAGAAGTTCAAAAGTTAGAACCTGACCATACTAAGAGTGGAACACATGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGTTCAAAAGTTAGAACCTGACCATACTAAGAGTGGAACACATGA  700

seq1  CCATCACAACCTAGCACAACTTCAGCACAAAGCCACTGGTACTTAATAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACAACCTAGCACAACTTCAGCACAAAGCCACTGGTACTTAATAAT  750

seq1  ACATGCTATAAACCATGATTAAAAAAAACAAGTTTCCAGAATTAAATAAT  799
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACATGCTATAAACCATGA-TAAAAAAAACAAGTTTCCAGAATTAAATAAT  799

seq1  AATTACATAGACTTCACCTGGTCAGGGATTATGTTGAAGCCACATGGGAT  849
       ||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  TATTACATAGACTTCACCTGGTCAGGGA-TATGTTGAAGCCTCATGGGAT  848

seq1  CATCTGAAGAGGACTGG-CCCGGGGTGGGAATGGAGTAAGTT  890
      |||||| |||||||||| ||||||||||||||||||||||||
seq2  CATCTG-AGAGGACTGGTCCCGGGGTGGGAATGGAGTAAGTT  889