BAC Information

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BAC

Clone NameB6Ng01-080L05
Chromosome7 (Build37)
Map Location 136,333,721 - 136,461,885
singlet/doubletdoublet
Overlap geneLOC100043144, Ppapdc1a
Upstream geneItgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714
Downstream geneBrwd2, LOC100043150, Fgfr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080L05.bB6Ng01-080L05.g
ACCDH895765DH895766
length1,1121,152
definitionDH895765|Mus musculus domesticus DNA, BAC clone: B6Ng01-080L05, 5' end.DH895766|Mus musculus domesticus DNA, BAC clone: B6Ng01-080L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,460,769 - 136,461,885)(136,333,721 - 136,334,878)
sequence
gaattccagacttgattagaaaccatcaagttctctgaccttggtgtttg
aagtccccttccctgccgccaagccttgctaaatgcatgggctgtttgca
accccgtgcacactgctggcttttcgtcattttccagtcaggaactcatt
gatttcggcaaacagaacagccaataattcctttttagttaccgtacagg
aggcagagtatggtgctcaattttgaagcatcacccaaagggaggtttag
ccgagaatggaaatgtctgaaggaggtaaccaggcatgcttggagacatc
gcaggaacacagcgccatagccagcagtaaattatagccacaaacatggc
agatcattcttactcactgtcatttatcttaggactcgatgtgagggagc
aacaacagtacaaagtgaagtgaaaggatttccaagcccacagagagggt
gcccagtaggatgttctgaggaccaccctaatcttcatccaaacactgcc
ctgccgctaaagtcaggtataggaaggtaccgatgtccccaacccccatg
aaaactcttaaaactgtgccatcacaaccccagaccaagaccacgtgacc
aaactcccagtctacaggtcaatagtccagagaacacacctgcctggaga
aaccaaggctaggcaggggaggggacaggaagtggaggggtggaggatag
catatttaagacagagttggtcttgagctcctgacattccagctctttcc
ccagtgcaggcccgtggggtgctgctatgctgtcccctccttttcctcaa
gttgatgagagtgcttattttagctctgtctttattattattattattat
tattattatatttttttcatttacatttcaaaatgttatcccctttccta
gtttcctctgtaaaaatcccctataccctcccccctccccctgctcccca
acccacctggctccacttcctggccctggcattccttcttactagggcct
aaatcttcctcagaccatggcctctctccactgatggctgctagccatcc
tctgctgcatatgcacttaaggacaaaaatcctggtcttaatcccatttg
tttactcaagct
gaattcacatctcaactacagacacaaaggccagagagagagagagagag
agagagagagagagagagagagagagagagagagagagggagagagagag
agagggagagagacagagagacagagagacagagagagacagagagagac
agagagagacagagagacagagacagagagacagagacacacagagagac
agggacctagaaacatagagacagagatacagaggcagagagagactgag
acagacattgacatagagttaaagagagacagggaggactggaagtgttg
agaggcttctactaaaaatccctgcctccagtggtgtcctttatctagat
aggccacccctcctaacctccttaaacttcccaaacagcatcaccaacct
gggacctgagcctatgggggagatttcttatttaaatgaccacaggctcc
aacatacaggcccaggcacccaacttagccatgccatacagaatgaaggt
ctaatgacagacaccttaggtctagtcaataaagaaagccttcttctagc
cagaagcacctcttcctgtcttctgctccctggccaagctgcatatatca
caatctatcagtagtcgactctctggagcacatttgaaactcatacagag
caacacttaaattttaattagttcctctgagcaccagatagagttaaaca
aacagaaagtctatatcttctcccatgtgattttaccttccatttggtca
ctctcctaagaagccactgggctgttcttagtgtagggatctgagacact
aagtatccagggaaggcattgagtgtgatacagaacacatgcacagaggg
catgagtaccctgcactcctcatagttgtttagggagagaggcagtgagg
tcaaggccactggtcattgagcagaagtgtcaaggggagggctcatgagc
caggtgttggcttgtgagaacacacagtgcttttgactctggggcagtca
agcttgcaatgtctaaggtggaggagcatacggacattaggttagctatt
gagtgtgtcttggtaaacagctactttcctcatctagagaactcactcta
tcaatgtgaagtcaggaataagatgggtgcccatggcagtgggggaatgg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136460769_136461885
seq2: B6Ng01-080L05.b_45_1156 (reverse)

seq1  AGCTTGAGTAAAC-AATGGGATTAAAGACAGAGCTCTTGTCTCTAGCTGC  49
      ||||||||||||| |||||||||||   |||   | |||||  ||  |||
seq2  AGCTTGAGTAAACAAATGGGATTAAGACCAGGATTTTTGTCCTTAAGTGC  50

seq1  ATATGCAGCAGAGGATGGCCTAGCCAGCCATCAGTGGGAGGAGAGGCCCT  99
      |||||||||||||||||| |||| |||||||||||||   |||||| || 
seq2  ATATGCAGCAGAGGATGG-CTAG-CAGCCATCAGTGG--AGAGAGG-CCA  95

seq1  TGGTCTTGCGGAAGATTCTAGGCCCTAGTATGAAGGAATGCCAGGGCCAG  149
      ||||| || |||||||| |||||||||||| |||||||||||||||||||
seq2  TGGTC-TGAGGAAGATT-TAGGCCCTAGTAAGAAGGAATGCCAGGGCCAG  143

seq1  GAAGTGGGAGCAGGTGGGTTGGGGAGCAGGGGGAGGGGGGAGGGTATAGG  199
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGAGCCAGGTGGGTTGGGGAGCAGGGGGAGGGGGGAGGGTATAGG  193

seq1  GGATTTTTACAGAGGAAACTAGGAAAGGGGATAACA-TTTGAAATGTAAA  248
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGATTTTTACAGAGGAAACTAGGAAAGGGGATAACATTTTGAAATGTAAA  243

seq1  TGAAAAAAATATAATAATAATAATAATAATAATAATAAAGACAGAGCTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAATATAATAATAATAATAATAATAATAATAAAGACAGAGCTAA  293

seq1  AATAAGCACTCTCATCAACTTGAGGAAAAGGAGGGGACAGCATAGCAGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCACTCTCATCAACTTGAGGAAAAGGAGGGGACAGCATAGCAGCA  343

seq1  CCCCACGGGCCTGCACTGGGGAAAGAGCTGGAATGTCAGGAGCTCAAGAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACGGGCCTGCACTGGGGAAAGAGCTGGAATGTCAGGAGCTCAAGAC  393

seq1  CAACTCTGTCTTAAATATGCTATCCTCCACCCCTCCACTTCCTGTCCCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTGTCTTAAATATGCTATCCTCCACCCCTCCACTTCCTGTCCCCT  443

seq1  CCCCTGCCTAGCCTTGGTTTCTCCAGGCAGGTGTGTTCTCTGGACTATTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCTAGCCTTGGTTTCTCCAGGCAGGTGTGTTCTCTGGACTATTG  493

seq1  ACCTGTAGACTGGGAGTTTGGTCACGTGGTCTTGGTCTGGGGTTGTGATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAGACTGGGAGTTTGGTCACGTGGTCTTGGTCTGGGGTTGTGATG  543

seq1  GCACAGTTTTAAGAGTTTTCATGGGGGTTGGGGACATCGGTACCTTCCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTTTTAAGAGTTTTCATGGGGGTTGGGGACATCGGTACCTTCCTA  593

seq1  TACCTGACTTTAGCGGCAGGGCAGTGTTTGGATGAAGATTAGGGTGGTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGACTTTAGCGGCAGGGCAGTGTTTGGATGAAGATTAGGGTGGTCC  643

seq1  TCAGAACATCCTACTGGGCACCCTCTCTGTGGGCTTGGAAATCCTTTCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACATCCTACTGGGCACCCTCTCTGTGGGCTTGGAAATCCTTTCAC  693

seq1  TTCACTTTGTACTGTTGTTGCTCCCTCACATCGAGTCCTAAGATAAATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTGTACTGTTGTTGCTCCCTCACATCGAGTCCTAAGATAAATGA  743

seq1  CAGTGAGTAAGAATGATCTGCCATGTTTGTGGCTATAATTTACTGCTGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTAAGAATGATCTGCCATGTTTGTGGCTATAATTTACTGCTGGC  793

seq1  TATGGCGCTGTGTTCCTGCGATGTCTCCAAGCATGCCTGGTTACCTCCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCGCTGTGTTCCTGCGATGTCTCCAAGCATGCCTGGTTACCTCCTT  843

seq1  CAGACATTTCCATTCTCGGCTAAACCTCCCTTTGGGTGATGCTTCAAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTTCCATTCTCGGCTAAACCTCCCTTTGGGTGATGCTTCAAAAT  893

seq1  TGAGCACCATACTCTGCCTCCTGTACGGTAACTAAAAAGGAATTATTGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACCATACTCTGCCTCCTGTACGGTAACTAAAAAGGAATTATTGGC  943

seq1  TGTTCTGTTTGCCGAAATCAATGAGTTCCTGACTGGAAAATGACGAAAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTTGCCGAAATCAATGAGTTCCTGACTGGAAAATGACGAAAAG  993

seq1  CCAGCAGTGTGCACGGGGTTGCAAACAGCCCATGCATTTAGCAAGGCTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGTGTGCACGGGGTTGCAAACAGCCCATGCATTTAGCAAGGCTTG  1043

seq1  GCGGCAGGGAAGGGGACTTCAAACACCAAGGTCAGAGAACTTGATGGTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCAGGGAAGGGGACTTCAAACACCAAGGTCAGAGAACTTGATGGTTT  1093

seq1  CTAATCAAGTCTGGAATTC  1117
      |||||||||||||||||||
seq2  CTAATCAAGTCTGGAATTC  1112

seq1: chr7_136333721_136334878
seq2: B6Ng01-080L05.g_69_1220

seq1  GAATTCACATCTCAACTACAGACACAAAGGCCAGAGAGAGAGAGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTCAACTACAGACACAAAGGCCAGAGAGAGAGAGAGAGAG  50

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAG  100

seq1  AGAGGGAGAGAGACAGAGAGACAGAGAGACAGAGAGAGACAGAGAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAGAGAGACAGAGAGACAGAGAGACAGAGAGAGACAGAGAGAGAC  150

seq1  AGAGAGAGACAGAGAGACAGAGACAGAGAGACAGAGACACACAGAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGACAGAGAGACAGAGACAGAGAGACAGAGACACACAGAGAGAC  200

seq1  AGGGACCTAGAAACATAGAGACAGAGATACAGAGGCAGAGAGAGACTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCTAGAAACATAGAGACAGAGATACAGAGGCAGAGAGAGACTGAG  250

seq1  ACAGACATTGACATAGAGTTAAAGAGAGACAGGGAGGACTGGAAGTGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATTGACATAGAGTTAAAGAGAGACAGGGAGGACTGGAAGTGTTG  300

seq1  AGAGGCTTCTACTAAAAATCCCTGCCTCCAGTGGTGTCCTTTATCTAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTTCTACTAAAAATCCCTGCCTCCAGTGGTGTCCTTTATCTAGAT  350

seq1  AGGCCACCCCTCCTAACCTCCTTAAACTTCCCAAACAGCATCACCAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACCCCTCCTAACCTCCTTAAACTTCCCAAACAGCATCACCAACCT  400

seq1  GGGACCTGAGCCTATGGGGGAGATTTCTTATTTAAATGACCACAGGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTGAGCCTATGGGGGAGATTTCTTATTTAAATGACCACAGGCTCC  450

seq1  AACATACAGGCCCAGGCACCCAACTTAGCCATGCCATACAGAATGAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACAGGCCCAGGCACCCAACTTAGCCATGCCATACAGAATGAAGGT  500

seq1  CTAATGACAGACACCTTAGGTCTAGTCAATAAAGAAAGCCTTCTTCTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGACAGACACCTTAGGTCTAGTCAATAAAGAAAGCCTTCTTCTAGC  550

seq1  CAGAAGCACCTCTTCCTGTCTTCTGCTCCCTGGCCAAGCTGCATATATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCACCTCTTCCTGTCTTCTGCTCCCTGGCCAAGCTGCATATATCA  600

seq1  CAATCTATCAGTAGTCGACTCTCTGGAGCACATTTGAAACTCATACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATCAGTAGTCGACTCTCTGGAGCACATTTGAAACTCATACAGAG  650

seq1  CAACACTTAAATTTTAATTAGTTCCTCTGAGCACCAGATAGAGTTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTTAAATTTTAATTAGTTCCTCTGAGCACCAGATAGAGTTAAACA  700

seq1  AACAGAAAGTCTATATCTTCTCCCATGTGATTTTACCTTCCATTTGGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGTCTATATCTTCTCCCATGTGATTTTACCTTCCATTTGGTCA  750

seq1  CTCTCCTAAGAAGCCACTGGGCTGTTCTTAGTGTAGGGATCTGAGACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTAAGAAGCCACTGGGCTGTTCTTAGTGTAGGGATCTGAGACACT  800

seq1  AAGTATCCAGGAAAGGCATTGAGTGTGATACAGAACACATGCACAGAGGG  850
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCCAGGGAAGGCATTGAGTGTGATACAGAACACATGCACAGAGGG  850

seq1  CATGAGTACCCTGCACTCCTCATAGTTGTTTAGGGAGAGAGGCAGTGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTACCCTGCACTCCTCATAGTTGTTTAGGGAGAGAGGCAGTGAGG  900

seq1  TCAAAGGCCACTGGTCATTGAGCAGAAGTGTCAA-GGGAGGGCTCATGAG  949
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TC-AAGGCCACTGGTCATTGAGCAGAAGTGTCAAGGGGAGGGCTCATGAG  949

seq1  CCAGGTGTTGGCTTGTGAGAACACACAGTGC-TTTGACTCTGGGGCAGTC  998
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCAGGTGTTGGCTTGTGAGAACACACAGTGCTTTTGACTCTGGGGCAGTC  999

seq1  AAGCTTGCAATGTCTAA-GTGGAGGAGGCATAC-GACATTAAGTTTAGCT  1046
      ||||||||||||||||| |||||||| |||||| |||||| || ||||||
seq2  AAGCTTGCAATGTCTAAGGTGGAGGA-GCATACGGACATT-AGGTTAGCT  1047

seq1  A-TGAGTGGTGTCTTGGTAAAACAGCTTACTTTCCTCATCTAAGGAGGAC  1095
      | ||||| |||||||||| ||||||| |||||||||||||||  ||| ||
seq2  ATTGAGT-GTGTCTTGGT-AAACAGC-TACTTTCCTCATCTA--GAGAAC  1092

seq1  TCACTCTATCAATGTGAAGTCCAAGAATAAGATGGTGTTGCCATATGGCA  1145
      |||||||||||||||||||| || ||||||||||  | ||||  ||||||
seq2  TCACTCTATCAATGTGAAGT-CAGGAATAAGATG--GGTGCC-CATGGCA  1138

seq1  GTTGGGG-ATGGAG  1158
      || |||| ||||||
seq2  GTGGGGGAATGGAG  1152