BAC Information

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BAC

Clone NameB6Ng01-081E10
Chromosome7 (Build37)
Map Location 151,124,341 - 151,314,223
singlet/doubletdoublet
Overlap genenone
Upstream geneAscl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
Downstream geneShank2, Cttn, Ppfia1, Fadd, Tmem16a, LOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081E10.bB6Ng01-081E10.g
ACCDH896176DH896177
length1621,023
definitionDH896176|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E10, 5' end.DH896177|Mus musculus domesticus DNA, BAC clone: B6Ng01-081E10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,124,341 - 151,124,502)(151,313,193 - 151,314,223)
sequence
gaattcaggaccagcctacatagcaagattctatctcacaaaggcaaaat
aaaatgggggggggggaggtgctttcatgaagctctgccttctcttccca
taggaatgagctgtccatcctacttccctgtctttgcccaaacgagcaag
aaatttattttg
gaattcaacgtcagctgcacaaccacgggtctctttgcgcttacatcgtc
aaacgctgtcctcatttcatgtctgttgctgtgacagatacttagagaag
gaaaggtttatttgccttacaactccaggttagagttgtaagaaatgggt
ctcaagaaaatgaccacacaatccaaagcacttcagcaggaaaaaaatgt
tgcacccactgaagccagcaggcagcaggagtcacactggatttttattc
ctaatgaaaccctttacatcttgtgttttacccaggtgaccagagctcag
cctcacatccttacttgcctggctggctaatagccatgcagtttctagga
agaaataaaacttgaacatatattttgattccaaaaactgcaagccaact
atggcagaatgttaatttctaccaattggcttctttacaattttttaaat
gtagttttgtcttatttgatagaaaagaaaatacattttgcttatatttt
ccacacagccaattactgaggggaaactgaggcagggacttaaagcatca
atccaccgtcaggagcagagggagaataaacgcatggatgcttgcttgct
tctactgagtcaacttcttgactattacactgttcaggactccctgacta
gagaatggtgccgcccaccgtaggctatacgtcttcccacatcaattaag
aatcaagataatgcccacaggccaacctgatctagatagtcctctcttcc
agtgattctagattgtatcaaattgacaaagtgaaccaccacaagcccga
gccaagtgatgcctggcatcaatactcagcaaccacatcatgacattttt
gttccactgcatcttgtgtggggacaactggtctgtcagaggcatgggac
agtctacagtggcagcagggttcataaggtctgtgaactcctcactgagg
attgtattctatgtatcagaggtctggcttctatccacccactcccagga
gttctttcttggtaggactcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151124341_151124502
seq2: B6Ng01-081E10.b_41_202

seq1  GAATTCAGGACCAGCCTACATAGCAAGATTCTATCTCACAAAGGCAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCAGCCTACATAGCAAGATTCTATCTCACAAAGGCAAAAT  50

seq1  AAAATGGGGGGGGGGGAGGTGCTATCATGAAGCTCTGCCTTCTCTTCCCA  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAATGGGGGGGGGGGAGGTGCTTTCATGAAGCTCTGCCTTCTCTTCCCA  100

seq1  TAGGAGTGAGCTGTCCATCCTACTTCCCTGTCTTTGCCCAAACGAGCAAG  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATGAGCTGTCCATCCTACTTCCCTGTCTTTGCCCAAACGAGCAAG  150

seq1  AAATTTATGTTG  162
      |||||||| |||
seq2  AAATTTATTTTG  162

seq1: chr7_151313193_151314223
seq2: B6Ng01-081E10.g_70_1091 (reverse)

seq1  ATGAGTCCT--CACAGAAGAACTCCTGGGAGTGGGTGGGATAGTAGCCCA  48
      |||||||||  ||   |||||||||||||||||||| |||||| || |||
seq2  ATGAGTCCTACCAAGAAAGAACTCCTGGGAGTGGGT-GGATAGAAG-CCA  48

seq1  GCCTTCTGATACATAGAATACAGTCCTCAGTGAGGAGTTCACAGACCCTA  98
      | | |||||||||||||||||| |||||||||||||||||||||||| ||
seq2  GACCTCTGATACATAGAATACAATCCTCAGTGAGGAGTTCACAGACCTTA  98

seq1  TGAACCCTTGCTGCCACTGTAGACTGTCCCCATGCCTCTGGACAGA-CAG  147
      ||||||| ||||||||||||||||||| ||||||||||| |||||| |||
seq2  TGAACCC-TGCTGCCACTGTAGACTGT-CCCATGCCTCT-GACAGACCAG  145

seq1  TTGTCCCCACACAAAGATTGCAGTGGAACAAAAATGTCATGATGTGGTTG  197
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  TTGTCCCCACAC-AAGA-TGCAGTGGAACAAAAATGTCATGATGTGGTTG  193

seq1  CTGAGTATTGATGGCCAGGCATCACTTGGCTCGGGCCTTTGTGGTGGTTC  247
      |||||||||||| |||||||||||||||||||||||  ||||||||||||
seq2  CTGAGTATTGAT-GCCAGGCATCACTTGGCTCGGGC--TTGTGGTGGTTC  240

seq1  ACTTTGTCAATTTGATACAATCTAGAATCACCTGGAAGAGAGGAACTATC  297
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  ACTTTGTCAATTTGATACAATCTAGAATCA-CTGGAAGAGAGG-ACTATC  288

seq1  TAGATCAGGTTGGCCTGTGGGCATTATCTTGATTCTTAATTGATGTGGGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGGTTGGCCTGTGGGCATTATCTTGATTCTTAATTGATGTGGGA  338

seq1  AGACGTATAGCCTACGGTGGGCGGCACCATTCTCTAGTCAGGGAGTCCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTATAGCCTACGGTGGGCGGCACCATTCTCTAGTCAGGGAGTCCTG  388

seq1  AACAGTGTAATAGTCAAGAAGTTGACTCAGTAGAAGCAAGCAAGCATCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGTAATAGTCAAGAAGTTGACTCAGTAGAAGCAAGCAAGCATCCA  438

seq1  TGCGTTTATTCTCCCTCTGCTCCTGACGGTGGATTGATGCTTTAAGTCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTTATTCTCCCTCTGCTCCTGACGGTGGATTGATGCTTTAAGTCCC  488

seq1  TGCCTCAGTTTCCCCTCAGTAATTGGCTGTGTGGAAAATATAAGCAAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAGTTTCCCCTCAGTAATTGGCTGTGTGGAAAATATAAGCAAAAT  538

seq1  GTATTTTCTTTTCTATCAAATAAGACAAAACTACATTTAAAAAATTGTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTTTTCTATCAAATAAGACAAAACTACATTTAAAAAATTGTAA  588

seq1  AGAAGCCAATTGGTAGAAATTAACATTCTGCCATAGTTGGCTTGCAGTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAATTGGTAGAAATTAACATTCTGCCATAGTTGGCTTGCAGTTT  638

seq1  TTGGAATCAAAATATATGTTCAAGTTTTATTTCTTCCTAGAAACTGCATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATCAAAATATATGTTCAAGTTTTATTTCTTCCTAGAAACTGCATG  688

seq1  GCTATTAGCCAGCCAGGCAAGTAAGGATGTGAGGCTGAGCTCTGGTCACC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAGCCAGCCAGGCAAGTAAGGATGTGAGGCTGAGCTCTGGTCACC  738

seq1  TGGGTAAAACACAAGATGTAAAGGGTTTCATTAGGAATAAAAATCCAGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAAACACAAGATGTAAAGGGTTTCATTAGGAATAAAAATCCAGTG  788

seq1  TGACTCCTGCTGCCTGCTGGCTTCAGTGGGTGCAACATTTTTTTCCTGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTGCTGCCTGCTGGCTTCAGTGGGTGCAACATTTTTTTCCTGCT  838

seq1  GAAGTGCTTTGGATTGTGTGGTCATTTTCTTGAGACCCATTTCTTACAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCTTTGGATTGTGTGGTCATTTTCTTGAGACCCATTTCTTACAAC  888

seq1  TCTAACCTGGAGTTGTAAGGCAAATAAACCTTTCCTTCTCTAAGTATCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCTGGAGTTGTAAGGCAAATAAACCTTTCCTTCTCTAAGTATCTG  938

seq1  TCACAGCAACAGACATGAAATGAGGACAGCGTTTGACGATGTAAGCGCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCAACAGACATGAAATGAGGACAGCGTTTGACGATGTAAGCGCAA  988

seq1  AGAGACCCGTGGTTGTGCAGCTGACGTTGAATTC  1031
      ||||||||||||||||||||||||||||||||||
seq2  AGAGACCCGTGGTTGTGCAGCTGACGTTGAATTC  1022