BAC Information

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BAC

Clone NameB6Ng01-081F09
Chromosome7 (Build37)
Map Location 134,455,945 - 134,456,742
singlet/doubletsinglet
Overlap geneItgal
Upstream geneLat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2
Downstream geneZfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081F09.bB6Ng01-081F09.g
ACCDH896220DH896221
length801277
definitionDH896220|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F09, 5' end.DH896221|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggtcaaacactgggtgggccctttagtgtgtgtgagggtatg
gatgatgaaaacttagatcggccgttagaccactgagtgctacaaggagg
tgagcagactcctgtgggatagcatcagaggcagctcattgcaggcggag
cctctctgaagggctgggttggagctgagaactgagagatggggatgtgt
caggctggcagaagcctaggttaagagctttacagaaagcccagcatgta
ccaaggccattaagaaaggtggaagctgacaggaaagagggcaagtgtgg
ccggtatgtggttgccccagggcagtgtggtaggattgagacaggcaatg
catcatgggtaattaaaggcttgaagtatattttgattattatatggcat
gatatgctctacatagagattttcaggtcagccaggggtgacagagtaaa
actttgttttaagaaaaaaaaatatcacatggcgatatgcacgtgtctct
aagctcatttcccaataccataatacacagtgtagaactccctcctcccc
tgtatcgtgtggcataactaggtctcttgctccctcttagggcctcatta
tcccaggctgtggtcttctgtcttaggcttaccagtactgggattgtagt
gtgtgcccaccctggcttctcttgttcactctctcatcaagaacatatct
atctatctatctatctatctatctatctatctatttaccctatcatctct
ctgtctgtctgtctgtctgtctgtctgtcttgtctgtctcttccctgctt
a
atcccccccctttttttgactggaaggccagcttgagacatccatgcttc
atggacctgataatgataggcagccattgttggattagctgggaccacag
cctgtaagttattcatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatacatgggggg
gtatatatatataaatatactatatttatctttttttttttttttttttt
tttttctggggggagggggggggaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134455945_134456742
seq2: B6Ng01-081F09.b_35_835

seq1  GAATTCAGGGTCAAACACTGGGTGGGCCC-TGAGTGTGTGTGAGGGTATG  49
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  GAATTCAGGGTCAAACACTGGGTGGGCCCTTTAGTGTGTGTGAGGGTATG  50

seq1  GATGATGAAAACTTAGATCGGCCGTTAGACCACTGAGTGCTACAAGGAGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGAAAACTTAGATCGGCCGTTAGACCACTGAGTGCTACAAGGAGG  100

seq1  TGAGCAGACTCCTGTGGGATAGCATCAGAGGCAGCTCATTGCAGGCGGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGACTCCTGTGGGATAGCATCAGAGGCAGCTCATTGCAGGCGGAG  150

seq1  CCTCTCTGAAGGGCTGGGTTGGAGCTGAGAACTGAGAGATGGGGATGTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGAAGGGCTGGGTTGGAGCTGAGAACTGAGAGATGGGGATGTGT  200

seq1  CAGGCTGGCAGAAGCCTAGGTTAAGAGCTTTACAGAAAGCCCAGCATGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCAGAAGCCTAGGTTAAGAGCTTTACAGAAAGCCCAGCATGTA  250

seq1  CCAAGGCCATTAAGAAAGGTGGAAGCTGACAGGAAAGAGGGCAAGTGTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCCATTAAGAAAGGTGGAAGCTGACAGGAAAGAGGGCAAGTGTGG  300

seq1  CCGGTATGTGGTTGCCCCAGGGCAGTGTGGTAGGATTGAGACAGGCAATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTATGTGGTTGCCCCAGGGCAGTGTGGTAGGATTGAGACAGGCAATG  350

seq1  CATCATGGGTAATTAAAGGCTTGAAGTATATTTTGATTATTATATGGCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGGGTAATTAAAGGCTTGAAGTATATTTTGATTATTATATGGCAT  400

seq1  GATATGCTCTACATAGAGATTTTCAGGTCAGCCAGGGGTGACAGAGTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCTCTACATAGAGATTTTCAGGTCAGCCAGGGGTGACAGAGTAAA  450

seq1  ACTTTGTTTTAAGAAAAAAAAATATCACATGGCGATATGCACGTGTCTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTTTAAGAAAAAAAAATATCACATGGCGATATGCACGTGTCTCT  500

seq1  AAGCTCATTTCCCAATACCATAATACACAGTGTAGAACTCCCTCCTCCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATTTCCCAATACCATAATACACAGTGTAGAACTCCCTCCTCCCC  550

seq1  TGTATCGTGTGGCATAACTAGGTCTCTTGCTCCCTCTTAGGGCCTCATTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCGTGTGGCATAACTAGGTCTCTTGCTCCCTCTTAGGGCCTCATTA  600

seq1  TCCCAGGCTGTGGTCTTCTGTCTTAGGCTTACCAGTACTGGGATTGTAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCCAGGCTGTGGTCTTCTGTCTTAGGCTTACCAGTACTGGGATTGT-AG  649

seq1  TGTGTGCCCACCCTGGCTTCTCTTGTTCACTCTCTCATCAAGAACATATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCCCACCCTGGCTTCTCTTGTTCACTCTCTCATCAAGAACATATC  699

seq1  TATCTATCTATCTATCTATCTATCTATCTATCTATTTA-CCTATCATCTC  748
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATCTATCTATCTATCTATCTATCTATCTATCTATTTACCCTATCATCTC  749

seq1  TCTGTCTGTCTGTCTGTCTGTCTGTCTGTC-TGTCTGTCTC-TACCTGCT  796
      |||||||||||||||||||||||||||||| |||||||||| | ||||||
seq2  TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTTGTCTGTCTCTTCCCTGCT  799

seq1  TA  798
      ||
seq2  TA  801