BAC Information

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BAC

Clone NameB6Ng01-081J10
Chromosome7 (Build37)
Map Location 139,262,611 - 139,395,936
singlet/doubletdoublet
Overlap geneCpxm2
Upstream geneDmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679, Gpr26
Downstream gene4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik, Zranb1, Ctbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081J10.bB6Ng01-081J10.g
ACCDH896400DH896401
length860363
definitionDH896400|Mus musculus domesticus DNA, BAC clone: B6Ng01-081J10, 5' end.DH896401|Mus musculus domesticus DNA, BAC clone: B6Ng01-081J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,262,611 - 139,263,470)(139,395,568 - 139,395,936)
sequence
gaattcactcacagtcagtcatgacatccctgctcagaggcttgtgtgtg
tggtgacagttgagacagaaagctgaacttctaacatttggctcagaggc
aagggagccaagtcaccaggaagcatgtgggagctggagctgtgtggtga
ttaagagtgtacagtcacaaggcctgcgcctagatctctatttagtgctg
catgaccttggacgagccacttaaacagtctgtgccttacttttttcacc
tatttgttggcttacagtgagcagtagaagagagatatgtagaagagata
gcctgtgtgcctagtccactgtcagtactaaataaatagttaggaagttc
aaaaccacactgctatactaggagacattagcccccccccccccctgcct
agtcacaggagcaggccaaacctatcacagcacccagttgccctgactgt
gccagcagaggcaaagctctttggcacagaggaatagacagtgacaaacg
atgctgataaactgccctcttgctgtggtggtcacctgaccatgaaagaa
ctggtcccagtacaaccttggtgaccagcaggacacagaggcacaatgac
agcagaagctcctggtcagccaaccttgaagccaatccttctatgacact
tagaaccagaagcaccagccgtagtttccatatgaaatgtccttatagcc
tcacatccctagctagtgacatattttaagatgtagtagaatatctagta
ggtatggcatagatatagaaactggggggtgcctttgaaggttgcatgtg
gttcagacccccctcctccctctctctctctctttctctctctctctctc
tctctctctc
acattcaccaactcatttcatgaagtgtcagattactaacctgacctgtg
agggacagggccaccagagggaggaggggcaggtggcaaagactagtttt
caaagcaggaagtcaaacctgggacacatggccattccaaaatagaactt
ttcaagttcttattatttttatgctcttccctcttaacttcgaagggatc
tttttgttctttttatgtcttggatttgtttttaatgagcatgctttttt
ttttttttaaacaacaaaaacgtcattattcttcaagcatttctttttga
gttttctcctctccatctggtttgcctcataaaaatgggagggagggaga
gagggagaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_139262611_139263470
seq2: B6Ng01-081J10.b_45_904

seq1  GAATTCACTCACAGTCAGTCATGACATCCCTGCTCAGAGGCTTGTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACAGTCAGTCATGACATCCCTGCTCAGAGGCTTGTGTGTG  50

seq1  TGGTGACAGTTGAGACAGAAAGCTGAACTTCTAACATTTGGCTCAGAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACAGTTGAGACAGAAAGCTGAACTTCTAACATTTGGCTCAGAGGC  100

seq1  AAGGGAGCCAAGTCACCAGGAAGCATGTGGGAGCTGGAGCTGTGTGGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGCCAAGTCACCAGGAAGCATGTGGGAGCTGGAGCTGTGTGGTGA  150

seq1  TTAAGAGTGTACAGTCACAAGGCCTGCGCCTAGATCTCTATTTAGTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGTGTACAGTCACAAGGCCTGCGCCTAGATCTCTATTTAGTGCTG  200

seq1  CATGACCTTGGACGAGCCACTTAAACAGTCTGTGCCTTACTTTTTTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTTGGACGAGCCACTTAAACAGTCTGTGCCTTACTTTTTTCACC  250

seq1  TATTTGTTGGCTTACAGTGAGCAGTAGAAGAGAGATATGTAGAAGAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTGGCTTACAGTGAGCAGTAGAAGAGAGATATGTAGAAGAGATA  300

seq1  GCCTGTGTGCCTAGTCCACTGTCAGTACTAAATAAATAGTTAGGAAGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGTGCCTAGTCCACTGTCAGTACTAAATAAATAGTTAGGAAGTTC  350

seq1  AAAACCACACTGCTATACTAGGAGACATTAGCCCCCCCCCCCCCCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACACTGCTATACTAGGAGACATTAGCCCCCCCCCCCCCCTGCCT  400

seq1  AGTCACAGGAGCAGGCCAAACCTATCACAGCACCCAGTTGCCCTGACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGGAGCAGGCCAAACCTATCACAGCACCCAGTTGCCCTGACTGT  450

seq1  GCCAGCAGAGGCAAAGCTCTTTGGCACAGAGGAATAGACAGTGACAAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGAGGCAAAGCTCTTTGGCACAGAGGAATAGACAGTGACAAACG  500

seq1  ATGCTGATAAACTGCCCTCTTGCTGTGGTGGTCACCTGACCATGAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGATAAACTGCCCTCTTGCTGTGGTGGTCACCTGACCATGAAAGAA  550

seq1  CTGGTCCCAGTACAACCTTGGTGACCAGCAGGACACAGAGGCACAATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCCAGTACAACCTTGGTGACCAGCAGGACACAGAGGCACAATGAC  600

seq1  AGCAGAAGCTCCTGGTCAGCCAACCTTGAAGCCAATCCTTCTATGACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGCTCCTGGTCAGCCAACCTTGAAGCCAATCCTTCTATGACACT  650

seq1  TAGAACCAGAAGCACCAGCCGTAGTTTCCATATGAAATGTCCTTATAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCAGAAGCACCAGCCGTAGTTTCCATATGAAATGTCCTTATAGCC  700

seq1  TCACATCCCTAGCTAGTGACATATTTTAAGATGTAGTAGAATATCTAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCCTAGCTAGTGACATATTTTAAGATGTAGTAGAATATCTAGTA  750

seq1  GGTATGGCATAGATATAGAAACTGGGGGGTGCCTTTGAAGGTTGCATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGCATAGATATAGAAACTGGGGGGTGCCTTTGAAGGTTGCATGTG  800

seq1  GTTCAGACCCCCCTCCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGACCCCCCTCCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTC  850

seq1  TCTCTCTCTC  860
      ||||||||||
seq2  TCTCTCTCTC  860

seq1: chr7_139395568_139395936
seq2: B6Ng01-081J10.g_69_437 (reverse)

seq1  CCCCCTCTCCCTCTCTCCCTCCCTCCCATTTTTATGAGGCAAACCAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTCCCTCTCTCCCTCCCTCCCATTTTTATGAGGCAAACCAGATG  50

seq1  GAGAGGAGAAAACTCAAAAAGAAATGCTTGAAGAATAATGACGTTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAAAACTCAAAAAGAAATGCTTGAAGAATAATGACGTTTTTGT  100

seq1  TGTTTAAAAAAAAAAAAAAGCATGCTCATTAAAAACAAATCCAAGACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAAAAAAAAAAAAGCATGCTCATTAAAAACAAATCCAAGACATA  150

seq1  AAAAGAACAAAAAGATCCCTTCGAAGTTAAGAGGGAAGAGCATAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACAAAAAGATCCCTTCGAAGTTAAGAGGGAAGAGCATAAAAATA  200

seq1  ATAAGAACTTGAAAAGTTCTATTTTGGAATGGCCATGTGTCCCAGGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACTTGAAAAGTTCTATTTTGGAATGGCCATGTGTCCCAGGTTTG  250

seq1  ACTTCCTGCTTTGAAAACTAGTCTTTGCCACCTGCCCCTCCTCCCTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGCTTTGAAAACTAGTCTTTGCCACCTGCCCCTCCTCCCTCTGG  300

seq1  TGGCCCTGTCCCTCACAGGTCAGGTTAGTAATCTGACACTTCATGAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGTCCCTCACAGGTCAGGTTAGTAATCTGACACTTCATGAAATG  350

seq1  AGTTGGTGAATGTGAATTC  369
      |||||||||||||||||||
seq2  AGTTGGTGAATGTGAATTC  369