BAC Information

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BAC

Clone NameB6Ng01-081M22
Chromosome7 (Build37)
Map Location 13,917,838 - 13,918,864
singlet/doubletsinglet
Overlap genePla2g4c
Upstream geneV1rg11, Zfp551, EG666065, Zfp606, 2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1
Downstream geneLOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081M22.bB6Ng01-081M22.g
ACCDH896545DH896546
length1,032882
definitionDH896545|Mus musculus domesticus DNA, BAC clone: B6Ng01-081M22, 5' end.DH896546|Mus musculus domesticus DNA, BAC clone: B6Ng01-081M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttatctcttcctcatttttaaatggggttatttgaattt
ctggagtgcatcttcgtgagctctttgttttttttttttgtttttgtttt
tttttttttttttttttaatagaacagcagacacctttattacactacgc
atgaggctcatttgcctttccgggctttgatcttccgcagatagaactcc
agctccttgccttcgagcacatagccatctgctctgccacactggcctgg
tcgtgaggcaatacaggctagaagcttgccctgctggaactgctcctcca
ggaggctgctgattttggcattctttttcctttcgtcgtatttcttttga
attttctttgatcgttttttgtttaaaatctcttcctcctcaggagtcag
cttggcccccttcttgcggcccaggggcagtgcatagtgggactcgtacc
actgttggtacggtgtgctgtcaataagcacgatgcagttcttcaccagg
gtcttggtgcggacaagcttgttgttggatgcattgtagacaacatcaat
gatccttgttttgcgagtacaacactcagagccccaggaaaagttcccca
catccaatctcagggcacggtacttcttattgcctcctcgaactcggact
gtgtgtatgcggcgagggccaatcttcgtgttggcagcgggccgtcgctt
tcttgtggtaggggtttcgctacccccggtctttgcggcacttgtgccag
tttgtcccgagagatgcccatcgctcggcactggctggaaagagcgagct
ctttgtatatatggatattagtcccctatcagatttaggattggtaaaaa
tccttttctaatatgttggtgcccttttgtgttattgacagtatcttttg
ccttacagaagctttgcaattttatgaggtcccatttgtcgaatctttga
tcttacagcacaaacattggtgttctgcttcaggattttttttcccctgt
ggcccaattctttccccattttcacctctata
gaattctgtttttgtggctgtcttctttttggtttgttgagggattactt
tgttgctttttctaaggcatggtttccatccttgtattttttcttctgtt
attatcctttgaagggctggattcttggaaagataatgtgtgaatttggt
tttgtcgtggaaaactttggtttctccatctatggtaattgagatttttg
ctgggtatagtagcctgggctggcatttgtgttctcttagggtctgtata
acatctgtccaggatcttctgactttcatagtctctgtgaaaagtctggt
gtaattctgataggcctgactttatatgttacttgacctttttcccttac
tgcttttaatattctagctttattttgtatttgttgttctgattgttatg
tgtcaggaggaatttcttttctggtccaatctatttggaattctgtaggc
ttcttgtatgttcatgggcatctctttctttaggtttgggaagttttctt
ctataattttgttgaagatgtttgctggtcctttaagttgaaaatcttca
ttctcatctactcctattttccataggtttggtcttctcattgtgtcctg
gatttcctggatgttttgagttaggatctttttgcattttgtattttctt
tgattgttgtgccgatgttccccatggaatcttctgcacctgagattctc
tcttccatctcttgtattctgctgctgatgcttgcctctatggttccaga
ttttcttttcctaggttttctatctccagtgtgcctcactttgggtttct
ttattgtgtctacttccttttaagtcttggatggttttattgatttccat
cactgtatggcctgtttacttgcattccttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13917838_13918864
seq2: B6Ng01-081M22.b_45_1076

seq1  GAATTCTTTGTTTATCTCTTCCTCATTTTTAAATGGGGTTATTTGAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTATCTCTTCCTCATTTTTAAATGGGGTTATTTGAATTT  50

seq1  CTGGAGTGCATCTTCGTGAGCTCTTTGTTTTTTTTTTTTGTTTTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGCATCTTCGTGAGCTCTTTGTTTTTTTTTTTTGTTTTTGTTTT  100

seq1  TTTTTTTTTTTTTTTTTAATAGAACAGCAGACACCTTTATTACACTACGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTAATAGAACAGCAGACACCTTTATTACACTACGC  150

seq1  ATGAGGCTCATTTGCCTTTCCGGGCTTTGATCTTCCGCAGATAGAACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCTCATTTGCCTTTCCGGGCTTTGATCTTCCGCAGATAGAACTCC  200

seq1  AGCTCCTTGCCTTCGAGCACATAGCCATCTGCTCTGCCACACTGGCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTGCCTTCGAGCACATAGCCATCTGCTCTGCCACACTGGCCTGG  250

seq1  TCGTGAGGCAATACAGGCTAGAAGCTTGCCCTGCTGGAACTGCTCCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGAGGCAATACAGGCTAGAAGCTTGCCCTGCTGGAACTGCTCCTCCA  300

seq1  GGAGGCTGCTGATTTTGGCATTCTTTTTCCTTTCGTCGTATTTCTTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGCTGATTTTGGCATTCTTTTTCCTTTCGTCGTATTTCTTTTGA  350

seq1  ATTTTCTTTGATCGTTTTTTGTTTAAAATCTCTTCCTCCTCAGGAGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTGATCGTTTTTTGTTTAAAATCTCTTCCTCCTCAGGAGTCAG  400

seq1  CTTGGCCCCCTTCTTGCGGCCCAGGGGCAGTGCATAGTGGGACTCGTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCCCCTTCTTGCGGCCCAGGGGCAGTGCATAGTGGGACTCGTACC  450

seq1  ACTGTTGGTACGGTGTGCTGTCAATAAGCACGATGCAGTTCTTCACCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGTACGGTGTGCTGTCAATAAGCACGATGCAGTTCTTCACCAGG  500

seq1  GTCTTGGTGCGGACAAGCTTGTTGTTGGATGCATTGTAGACAACATCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGTGCGGACAAGCTTGTTGTTGGATGCATTGTAGACAACATCAAT  550

seq1  GATCCTTGTTTTGCGAGTACAACACTCAGAGCCCCAGGAAAAGTTCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGTTTTGCGAGTACAACACTCAGAGCCCCAGGAAAAGTTCCCCA  600

seq1  CATCCAATCTCAGGGCACGGTACTTCTTATTGCCTCCTCGAACTCGGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAATCTCAGGGCACGGTACTTCTTATTGCCTCCTCGAACTCGGACT  650

seq1  GTGTGTATGCGGCGAGGGCCAATCTTCGTGTTGGCAGCGGGCCGTCGC-T  699
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTGTGTATGCGGCGAGGGCCAATCTTCGTGTTGGCAGCGGGCCGTCGCTT  700

seq1  TCTTGTGGTAGGGTTTTCGCTTACCCCCGGTC-TTGCGGCACTTGTGCCA  748
      ||||||||||||| |||||| ||||||||||| |||||||||||||||||
seq2  TCTTGTGGTAGGGGTTTCGC-TACCCCCGGTCTTTGCGGCACTTGTGCCA  749

seq1  G-TTGTCCCGAGAGATGCCCATCGCTCGGCACTGGCTGGAAAGAGCGAGC  797
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCCCGAGAGATGCCCATCGCTCGGCACTGGCTGGAAAGAGCGAGC  799

seq1  TCTTTGTATATATGGATATTAGTCCCCTATCAGATTTAGGATTGGTAAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTATATATGGATATTAGTCCCCTATCAGATTTAGGATTGGTAAAA  849

seq1  ATCCTTTTCTAATATGTTGGTGCCCTTTTTGTGTTATTGACAGTATCTTT  897
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATCCTTTTCTAATATGTTGGTGCCC-TTTTGTGTTATTGACAGTATCTTT  898

seq1  TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGATTC-TT  946
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  TGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGAATCTTT  948

seq1  GATCTTACAGCACAAACCATTGGTGTTCTGC-TCAGGA--TTTTTTCCCC  993
      |||||||||||||||| |||||||||||||| ||||||  ||||||||||
seq2  GATCTTACAGCACAAA-CATTGGTGTTCTGCTTCAGGATTTTTTTTCCCC  997

seq1  TGT-GCCCATATCTTTCCCCACTTTCACCTCTATA  1027
      ||| |||||  |||||||||| |||||||||||||
seq2  TGTGGCCCAATTCTTTCCCCATTTTCACCTCTATA  1032