BAC Information

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BAC

Clone NameB6Ng01-081N17
Chromosome7 (Build37)
Map Location 106,281,188 - 106,464,208
singlet/doubletdoublet
Overlap geneUvrag, Dgat2, Mogat2, Mtap6
Upstream geneCapn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, EG666529
Downstream geneSerpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081N17.bB6Ng01-081N17.g
ACCDH896583DH896584
length1,062766
definitionDH896583|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N17, 5' end.DH896584|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,281,188 - 106,282,259)(106,463,445 - 106,464,208)
sequence
tgttcctaggaatattcaaccatattcaaaactggacaggcttgataaag
caccagaaccagaacaggaagagcagccctgggacaggagcggagtgagc
gtccagccctgcccttgaggggaagtttaaaacaatgccacagctccact
tttgttccagcctaaagtcaaaccaagctggggggcaccatgtcaaagcc
cagagaggggttatagaaccaggctctctgtgcactcgctcgctcggacc
agctgggaaggcccggtgctggagaggcaggcactccctagagctctgtt
aaagtccctgaggtctctggagcacattcatgggctggcaaatagttttg
cctctgagaacatcacattttttaatttttatgtctgtaaagtcccacta
ttccaaaacttgaatttccaccttaaagtaagatggacaacgatatcaac
ttcaaactagaagggtgagtgggggggactggagagagggtacagtactg
atgagcacttgctcatgcaggaagcccaggttggattcccagcaccacat
ggtaacaaccgtacgtgactctggttccaagggacccattatcttccagc
ctctggggcaatgcatgcatgtggtgcatagccatacatgcacacaaaac
acccacacataaaaataaaattaggggctggagagatggctcagcgggtt
aagagcactgactgctcttccagaggtcctgagttcaatttccaagcaac
tgcatggtggctcacaaccatacgtaatgagatctgatgccctcttcagt
catgcaggcatacatgcaaatagaggactcatatacataaacaaataact
aagaagataaatcctaatttttaaagaaataaaataaataaataaaaata
aatagctctccacataagaaagttctaatggcatttaacctaaagattac
aatgcaatatttcaccagattttaaaaagatttgtcttatttttttaaac
caactccccatttaataatcgagaggttattatatctcctcactattcca
gcacactaaaaa
gaattcattcctatgattcaaagaaaatatcagtgatgagaactatcaca
cagcagagaaacgtccccaccccagctacacccagagccggctcttgaca
catgctgtggcgctgactgaggtgtggctgggagcgagcaccccagagcc
caacagtttttttgttttgttttgttttgtttttctcttagaattggccc
aggtctggggatggcagtggagatctcagagaaagagctcagggtccttt
ccagacctagacttgggggatccagaacaaccgctctcaccttcaagtct
tgtgttccaggctctaaaggagactgagacacccagccccaccagtgctt
tgggagctcaacatgaggtgcctgtccatgcaaggctaaagacttggact
tgttcagacagacagactgcagccttgcattaagttcccagccccccttg
gcatcttttgtgtgatggtgatcagctcagggccctgggtaccggaggca
ggagctctctcgatgacctccagcctccagtctttctttccctactttgc
catgcaaagaacctttgctgtccaaatcgtcagggtgacccctcccttgc
ttgtttctatgtcgccagaacctaacaaccaggtccctttagatgggaat
ccctgtgactgtgacatgtctttagtacaagcatgtccccctgcatcatt
ttggacatcatatcttgtgttggctctgcgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgagtggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106281188_106282259
seq2: B6Ng01-081N17.b_55_1116

seq1  TGTTCCTAGGAATATTCAA-AATATTCAAAACTGGACAGGCTTGATAAAG  49
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TGTTCCTAGGAATATTCAACCATATTCAAAACTGGACAGGCTTGATAAAG  50

seq1  CACCAGAACCAGAACAGGAAGAGCAGCCCTGGGACAGGAGCGGAGTGAGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAACCAGAACAGGAAGAGCAGCCCTGGGACAGGAGCGGAGTGAGC  100

seq1  GTCCAGCCCTGCCCTTGAGGGGAAGTTTAAAACAATGCCACAGCTCCACT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCCCTGCCCTTGAGGGGAAGTTTAAAACAATGCCACAGCTCCACT  150

seq1  TTTGTTCCAGCCTAAAGTCAAACCAAGCTGGGGGGCACCATGTCAAAGCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCCAGCCTAAAGTCAAACCAAGCTGGGGGGCACCATGTCAAAGCC  200

seq1  CAGAGAGGGGTTATAGAACCAGGCTCTCTGTGCACTCGCTCGCTCGGACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGGGTTATAGAACCAGGCTCTCTGTGCACTCGCTCGCTCGGACC  250

seq1  AGCTGGGAAGGCCCGGTGCTGGAGAGGCAGGCACTCCCTAGAGCTCTGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGAAGGCCCGGTGCTGGAGAGGCAGGCACTCCCTAGAGCTCTGTT  300

seq1  AAAGTCCCTGAGGTCTCTGGAGCACATTCATGGGCTGGCAAATAGTTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCTGAGGTCTCTGGAGCACATTCATGGGCTGGCAAATAGTTTTG  350

seq1  CCTCTGAGAACATCACATTTTTTAATTTTTATGTCTGTAAAGTCCCACTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGAACATCACATTTTTTAATTTTTATGTCTGTAAAGTCCCACTA  400

seq1  TTCCAAAACTTGAATTTCCACCTTAAAGTAAGATGGACAACGATATCAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAACTTGAATTTCCACCTTAAAGTAAGATGGACAACGATATCAAC  450

seq1  TTCAAACTAGAAGGGTGAGTGGGGGGGACTGGAGAGAGGGTACAGTACTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTAGAAGGGTGAGTGGGGGGGACTGGAGAGAGGGTACAGTACTG  500

seq1  ATGAGCACTTGCTCATGCAGGAAGCCCAGGTTGGATTCCCAGCACCACAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACTTGCTCATGCAGGAAGCCCAGGTTGGATTCCCAGCACCACAT  550

seq1  GGTAACAACCGTACGTGACTCTGGTTCCAAGGGACCCATTATCTTCCAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAACCGTACGTGACTCTGGTTCCAAGGGACCCATTATCTTCCAGC  600

seq1  CTCTGGGGCAATGCATGCATGTGGTGCATAGCCATACATGCACACAAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGCAATGCATGCATGTGGTGCATAGCCATACATGCACACAAAAC  650

seq1  ACCCACACATAAAAATAAAATTAGGGGCTGGAGAGATGGCTCAGC-GGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCCACACATAAAAATAAAATTAGGGGCTGGAGAGATGGCTCAGCGGGTT  700

seq1  AAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAA-TTCCCAGCAAC  747
      |||||||||||||||||||||||||||||||||||||| |||| ||||||
seq2  AAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAAGCAAC  750

seq1  TGCATGGTGGCTCACAACCATACGTAATGAGATCTGATGCCCTCTTCAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGTGGCTCACAACCATACGTAATGAGATCTGATGCCCTCTTCAGT  800

seq1  CATGCAGGCATACATGCAAATAGAGTACTCATATACATAAACAAATAACT  847
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATGCAGGCATACATGCAAATAGAGGACTCATATACATAAACAAATAACT  850

seq1  AAGAAGATAAATCTAATTTTTTAAAGAAATAAAATAAATAAATAAAAATA  897
      |||||||||||||  | |||||||||||||||||||||||||||||||||
seq2  AAGAAGATAAATCCTAATTTTTAAAGAAATAAAATAAATAAATAAAAATA  900

seq1  AATAGCTCTCCCACATAAGAAAGTTCTAATGCCATTAAACCTAAAGTATA  947
      ||||||||| ||||||||||||||||||||| |||| |||||||||  ||
seq2  AATAGCTCT-CCACATAAGAAAGTTCTAATGGCATTTAACCTAAAGATTA  949

seq1  CAAATGCAAATATTTCAACCAGATTTTTAAAACAGATTTGTCTTTAATTT  997
      | ||||| |||||||| ||||||||||  ||| |||||||||||  ||||
seq2  C-AATGC-AATATTTC-ACCAGATTTT--AAAAAGATTTGTCTT--ATTT  992

seq1  TTCTAAACTAAACTCCCAATTTTATAATCGGAGAGTATATTATATCCTCC  1047
      || |||||  ||||||| |||| |||||| |||||  |||||||| ||||
seq2  TTTTAAAC-CAACTCCCCATTTAATAATC-GAGAGGTTATTATAT-CTCC  1039

seq1  TCATCATATCCCAGTACACTAAAAA  1072
      |||   ||| |||| ||||||||||
seq2  TCA--CTATTCCAGCACACTAAAAA  1062

seq1: chr7_106463445_106464208
seq2: B6Ng01-081N17.g_71_836 (reverse)

seq1  TAGCCACTCACACACACACACACACACACACACACACGCAGAGCCAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTCACACACACACACACACACACACACACACGCAGAGCCAACAC  50

seq1  AAGATATGATGTCC-AAATGATGCAGGGGGACATGCTTGTACT-AAGACA  98
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  AAGATATGATGTCCAAAATGATGCAGGGGGACATGCTTGTACTAAAGACA  100

seq1  TGTCACAGTCACAGGGATTCCCATCTAAAGGGACCTGGTTGTTAGGTTCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGTCACAGGGATTCCCATCTAAAGGGACCTGGTTGTTAGGTTCT  150

seq1  GGCGACATAGAAACAAGCAAGGGAGGGGTCACCCTGACGATTTGGACAGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACATAGAAACAAGCAAGGGAGGGGTCACCCTGACGATTTGGACAGC  200

seq1  AAAGGTTCTTTGCATGGCAAAGTAGGGAAAGAAAGACTGGAGGCTGGAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTCTTTGCATGGCAAAGTAGGGAAAGAAAGACTGGAGGCTGGAGG  250

seq1  TCATCGAGAGAGCTCCTGCCTCCGGTACCCAGGGCCCTGAGCTGATCACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGAGAGAGCTCCTGCCTCCGGTACCCAGGGCCCTGAGCTGATCACC  300

seq1  ATCACACAAAAGATGCCAAGGGGGGCTGGGAACTTAATGCAAGGCTGCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACAAAAGATGCCAAGGGGGGCTGGGAACTTAATGCAAGGCTGCAG  350

seq1  TCTGTCTGTCTGAACAAGTCCAAGTCTTTAGCCTTGCATGGACAGGCACC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTGAACAAGTCCAAGTCTTTAGCCTTGCATGGACAGGCACC  400

seq1  TCATGTTGAGCTCCCAAAGCACTGGTGGGGCTGGGTGTCTCAGTCTCCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTGAGCTCCCAAAGCACTGGTGGGGCTGGGTGTCTCAGTCTCCTT  450

seq1  TAGAGCCTGGAACACAAGACTTGAAGGTGAGAGCGGTTGTTCTGGATCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCCTGGAACACAAGACTTGAAGGTGAGAGCGGTTGTTCTGGATCCC  500

seq1  CCAAGTCTAGGTCTGGAAAGGACCCTGAGCTCTTTCTCTGAGATCTCCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCTAGGTCTGGAAAGGACCCTGAGCTCTTTCTCTGAGATCTCCAC  550

seq1  TGCCATCCCCAGACCTGGGCCAATTCTAAGAGAAAAACAAAACAAAACAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCCCCAGACCTGGGCCAATTCTAAGAGAAAAACAAAACAAAACAA  600

seq1  AACAAAAAAACTGTTGGGCTCTGGGGTGCTCGCTCCCAGCCACACCTCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAACTGTTGGGCTCTGGGGTGCTCGCTCCCAGCCACACCTCAG  650

seq1  TCAGCGCCACAGCATGTGTCAAGAGCCGGCTCTGGGTGTAGCTGGGGTGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCGCCACAGCATGTGTCAAGAGCCGGCTCTGGGTGTAGCTGGGGTGG  700

seq1  GGACGTTTCTCTGCTGTGTGATAGTTCTCATCACTGATATTTTCTTTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGTTTCTCTGCTGTGTGATAGTTCTCATCACTGATATTTTCTTTGAA  750

seq1  TCATAGGAATGAATTC  764
      ||||||||||||||||
seq2  TCATAGGAATGAATTC  766