BAC Information

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BAC

Clone NameB6Ng01-082H23
Chromosome7 (Build37)
Map Location 90,085,194 - 90,243,233
singlet/doubletdoublet
Overlap geneLOC619909
Upstream geneBnc1, Sh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3
Downstream geneA530021J07Rik, EG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082H23.bB6Ng01-082H23.g
ACCDH897034DH897035
length7481,120
definitionDH897034|Mus musculus domesticus DNA, BAC clone: B6Ng01-082H23, 5' end.DH897035|Mus musculus domesticus DNA, BAC clone: B6Ng01-082H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,085,194 - 90,085,941)(90,242,106 - 90,243,233)
sequence
gaattctctctctggtttgtcattagtgctttatttggagtgagaagaca
tttattcacatctccccaagaaaactcattcacacactgaatataccatt
caaaagtattcctttcttcttttacttaaaatgtcaccaccctcccacag
aggtcttggtggaggctgtttatggaaacatgtacagttcagcatgggtg
tgaaacctacagatccttcttcccatcactgtagaagctcataggcttgg
aaatgcagggacaaaaaaaaaaaaaaaaatggaacacagactgaaggaaa
ggccacccggagaccgccctacctcgggattcaccacatctatagacacc
aaaccctgacatgattgttgatgtaaagatgtgcttgcagacaggagcct
ggcatgggtgtcctctgccagaacctgagtaagagagatgcagatactca
ttttttttaatagctaaagcatttatttgcagatactcataaccaactat
tggactgaacctggggacctcaatggaagagttaggaaaaagactgaagg
agctgaaggggattgcaatcctattggaagaacaataatatcagctaacc
tgactcctcagagctcccagagactaaagcaccaaccaaagagtatacgt
gagtcagtccatggctccttctacatatgtagcagaggaatgccttatct
ggcatcaatgggagaggagatgcttgcctgtggagacttgttgtctca
gaattcaaagtcgacctttgtgagtgatgagtttgaggccagcctagaac
atgaaactaagactcaaattgaaataaataaatagggcacggtcaatatc
cagcacatacccacacactcgagagtatacaggcagcgcaaattagactc
actgggtttttaaaaagagaaaataaagtggggtggttatatatgtaatc
atgtaggcaaacctgttgatagataagagtttctgggggccaatacttga
ctagagaaaagagtgattttatagaaaggatggagtatgcaggaagcaga
catctgacaccacaagaggaaaggaacagaggacagaggggctcccttct
tcccaggctgatgccccggcagagatgacatgaccagtgtcctcagctga
tgtgtcaatactgggttcctttttccttaaaaccacaggaaaggggttac
gccgtctttattcctcagctcacggagcctctcatgcaggtcaggcaggc
tggtagactctgaaccacctctgtctctcaactacactcatacattttca
gtggctgtcaccacagtgacccagacatgacaccagccccacctctaatt
tccccagaccccaacaggcgacaacagctgttgcatgcgagcacaagtca
gcgtggcaaaggatttgtgaagagacagatgacccgcccacacagaagcg
accagaaatccctgctcactggcagctttaatgcccagccctgccctgcc
tttcacctctgaatgcctagtgttcagccacatgcacacaggacccacaa
tgccttagccatttcttcattacacgagtgtgattcccaagctttttttt
tcatgagcctcatcacattttacttttttttcttgttttgtttcctctct
ctttgtaacagggtctcctttaacacagaagacctggcctagaactccta
atcctcctgcctcagctcctgatgctgaatttaaaggcatttccactact
cctggacgcatgttctttctaatccccttctcagtccacaccgatcctcc
cctccacccagaacgaggctccacaaacctcaggccatctcgcctctctt
ggctcccttccagattgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90085194_90085941
seq2: B6Ng01-082H23.b_46_793

seq1  GAATTCTCTCTCTGGTTTGTCATTAGTGCTTTATTTGGAGTGAGAAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTGGTTTGTCATTAGTGCTTTATTTGGAGTGAGAAGACA  50

seq1  TTTATTCACATCTCCCCAAGAAAACTCATTCACACACTGAATATACCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACATCTCCCCAAGAAAACTCATTCACACACTGAATATACCATT  100

seq1  CAAAAGTATTCCTTTCTTCTTTTACTTAAAATGTCACCACCCTCCCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTATTCCTTTCTTCTTTTACTTAAAATGTCACCACCCTCCCACAG  150

seq1  AGGTCTTGGTGGAGGCTGTTTATGGAAACATGTACAGTTCAGCATGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGGTGGAGGCTGTTTATGGAAACATGTACAGTTCAGCATGGGTG  200

seq1  TGAAACCTACAGATCCTTCTTCCCATCACTGTAGAAGCTCATAGGCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCTACAGATCCTTCTTCCCATCACTGTAGAAGCTCATAGGCTTGG  250

seq1  AAATGCAGGGACAAAAAAAAAAAAAAAAATGGAACACAGACTGAAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGGGACAAAAAAAAAAAAAAAAATGGAACACAGACTGAAGGAAA  300

seq1  GGCCACCCGGAGACCGCCCTACCTCGGGATTCACCACATCTATAGACACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCCGGAGACCGCCCTACCTCGGGATTCACCACATCTATAGACACC  350

seq1  AAACCCTGACATGATTGTTGATGTAAAGATGTGCTTGCAGACAGGAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGACATGATTGTTGATGTAAAGATGTGCTTGCAGACAGGAGCCT  400

seq1  GGCATGGGTGTCCTCTGCCAGAACCTGAGTAAGAGAGATGCAGATACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGTGTCCTCTGCCAGAACCTGAGTAAGAGAGATGCAGATACTCA  450

seq1  TTTTTTTTAATAGCTAAAGCATTTATTTGCAGATACTCATAACCAACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAATAGCTAAAGCATTTATTTGCAGATACTCATAACCAACTAT  500

seq1  TGGACTGAACCTGGGGACCTCAATGGAAGAGTTAGGAAAAAGACTGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGAACCTGGGGACCTCAATGGAAGAGTTAGGAAAAAGACTGAAGG  550

seq1  AGCTGAAGGGGATTGCAATCCTATTGGAAGAACAATAATATCAGCTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAGGGGATTGCAATCCTATTGGAAGAACAATAATATCAGCTAACC  600

seq1  TGACTCCTCAGAGCTCCCAGAGACTAAAGCACCAACCAAAGAGTATACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTCAGAGCTCCCAGAGACTAAAGCACCAACCAAAGAGTATACGT  650

seq1  GAGTCAGTCCATGGCTCCTTCTACATATGTAGCAGAGGAATGCCTTATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGTCCATGGCTCCTTCTACATATGTAGCAGAGGAATGCCTTATCT  700

seq1  GGCATCAATGGGAGAGGAGATGCTTGCCTGTGGAGACTTGTTGTCTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAATGGGAGAGGAGATGCTTGCCTGTGGAGACTTGTTGTCTCA  748

seq1: chr7_90242106_90243233
seq2: B6Ng01-082H23.g_69_1188 (reverse)

seq1  GCTCAATCTGAGAAGGGAG-CAAGAGAGGCGAGAGTGTGCTTGAGGTTTG  49
      |||||||||| |||||||| |||||||||||||| || || |||||||||
seq2  GCTCAATCTG-GAAGGGAGCCAAGAGAGGCGAGA-TG-GCCTGAGGTTTG  47

seq1  TGGAGCCTCGTTCTGGGTGGAGGGGAGGATCGGTGTGGACTGAGAAGGGG  99
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGGAGCCTCGTTCTGGGTGGAGGGGAGGATCGGTGTGGACTGAGAA-GGG  96

seq1  GATTAGGAAAAGACATGCGTCCAGGAGTAGTGGAAATGCCTTTAAATTCA  149
      ||||| ||||  ||||||||||||||||||||||||||||||||||||||
seq2  GATTA-GAAAGAACATGCGTCCAGGAGTAGTGGAAATGCCTTTAAATTCA  145

seq1  GCATCAGGGAGGCTGAGGCAGGAGGATTAGGAGTTCTAGGCCAGGTCTTC  199
      ||||||||   |||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGG--AGCTGAGGCAGGAGGATTAGGAGTTCTAGGCCAGGTCTTC  193

seq1  TGTGTTAAAGGAGACCCTGTTACAAAAGAGAGAGGAAACAAAACAAAGAA  249
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  TGTGTTAAAGGAGACCCTGTTAC-AAAGAGAGAGGAAACAAAAC-AAGAA  241

seq1  AAAAAAGTAAAATGTGATGAGGCTCATGAAAAAAAAAGCTTGGGAATCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAAAATGTGATGAGGCTCATGAAAAAAAAAGCTTGGGAATCAC  291

seq1  ACTCGTGTAATGAAGAAATGGCTAAGGCATTGTGGGTCCTGTGTGCATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTGTAATGAAGAAATGGCTAAGGCATTGTGGGTCCTGTGTGCATGT  341

seq1  GGCTGAACACTAGGCATTCAGAGGTGAAAGGCAGGGCAGGGCTGGGCATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAACACTAGGCATTCAGAGGTGAAAGGCAGGGCAGGGCTGGGCATT  391

seq1  AAAGCTGCCAGTGAGCAGGGATTTCTGGTCGCTTCTGTGTGGGCGGGTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCCAGTGAGCAGGGATTTCTGGTCGCTTCTGTGTGGGCGGGTCA  441

seq1  TCTGTCTCTTCACAAATCCTTTGCCACGCTGACTTGTGCTCGCATGCAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTTCACAAATCCTTTGCCACGCTGACTTGTGCTCGCATGCAAC  491

seq1  AGCTGTTGTCGCCTGTTGGGGTCTGGGGAAATTAGAGGTGGGGCTGGTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGTCGCCTGTTGGGGTCTGGGGAAATTAGAGGTGGGGCTGGTGT  541

seq1  CATGTCTGGGTCACTGTGGTGACAGCCACTGAAAATGTATGAGTGTAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGGGTCACTGTGGTGACAGCCACTGAAAATGTATGAGTGTAGTT  591

seq1  GAGAGACAGAGGTGGTTCAGAGTCTACCAGCCTGCCTGACCTGCATGAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGAGGTGGTTCAGAGTCTACCAGCCTGCCTGACCTGCATGAGA  641

seq1  GGCTCCGTGAGCTGAGGAATAAAGACGGCGTAACCCCTTTCCTGTGGTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCGTGAGCTGAGGAATAAAGACGGCGTAACCCCTTTCCTGTGGTTT  691

seq1  TAAGGAAAAAGGAACCCAGTATTGACACATCAGCTGAGGACACTGGTCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAAAAGGAACCCAGTATTGACACATCAGCTGAGGACACTGGTCAT  741

seq1  GTCATCTCTGCCGGGGCATCAGCCTGGGAAGAAGGGAGCCCCTCTGTCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTCTGCCGGGGCATCAGCCTGGGAAGAAGGGAGCCCCTCTGTCCT  791

seq1  CTGTTCCTTTCCTCTTGTGGTGTCAGATGTCTGCTTCCTGCATACTCCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTTTCCTCTTGTGGTGTCAGATGTCTGCTTCCTGCATACTCCAT  841

seq1  CCTTTCTATAAAATCACTCTTTTCTCTAGTCAAGTATTGGCCCCCAGAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTATAAAATCACTCTTTTCTCTAGTCAAGTATTGGCCCCCAGAAA  891

seq1  CTCTTATCTATCAACAGGTTTGCCTACATGATTACATATATAACCACCCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCTATCAACAGGTTTGCCTACATGATTACATATATAACCACCCC  941

seq1  ACTTTATTTTCTCTTTTTAAAAACCCAGTGAGTCTAATTTGCGCTGCCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTCTCTTTTTAAAAACCCAGTGAGTCTAATTTGCGCTGCCTG  991

seq1  TATACTCTCGAGTGTGTGGGTATGTGCTGGATATTGACCGTGCCCTATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCTCGAGTGTGTGGGTATGTGCTGGATATTGACCGTGCCCTATTT  1041

seq1  ATTTATTTCAATTTGAGTCTTAGTTTCATGTTCTAGGCTGGCCTCAAACT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCAATTTGAGTCTTAGTTTCATGTTCTAGGCTGGCCTCAAACT  1091

seq1  CATCACTCACAAAGGTCGACTTTGAATTC  1128
      |||||||||||||||||||||||||||||
seq2  CATCACTCACAAAGGTCGACTTTGAATTC  1120