BAC Information

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BAC

Clone NameB6Ng01-082I05
Chromosome7 (Build37)
Map Location 115,973,726 - 116,090,111
singlet/doubletdoublet
Overlap geneOlfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5
Upstream geneGA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514
Downstream geneBC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082I05.bB6Ng01-082I05.g
ACCDH897044DH897045
length1,0761,089
definitionDH897044|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I05, 5' end.DH897045|Mus musculus domesticus DNA, BAC clone: B6Ng01-082I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,089,035 - 116,090,111)(115,973,726 - 115,974,537)
sequence
gaattcactatgtagaccaggctggcctctaactcagagatcagtctgcc
tctgcctccagagtgctgggattaaaggtaagcacacccccccatcatca
tgttttaattggttctacttgttgccctgtcatagacatcgtcttctgtg
agcagtgccgtgggcagctcagaaggtaggacatgggctatatgagacaa
gatgtagtgggaggagggtaacaactctagcaagcagttggagattgaga
attaagttaggaggaccacaacggcaaaggcgttcaggagagtgtcactc
cctcgaagtccttggttgtatcagagcagggctagacttccttaactagg
aggcaggccagagaatctatttaggattttagggaatggtgtaactgaga
aggttggtggttggaatacatttggcagatggttccagagaacctaaaac
ctatttaatgtctaactttgagggtggtggcggtggtgttactggagact
gaacccagtgttttgtgcatgttaggaacatgctctgtcattaagctaca
tccccagccctccacttgacttctaaatgtagacttaagcatgaaaatga
tctttaataagttccaactaaggtgccagctgctccagttcgagtaagtt
aagtctgatagtgcccgaggttctagattagataacagataagctctgga
aagttgtgtttgaaggctaggccttactgtgtgtagtagagaagtagttg
gacttggaaacagaattcatggttgagtcactgggccccggaaagcataa
cactgagctatcaagacacaggactaacattgcctgctgtaatttcggat
attccgaccattaagttggtgatgtatattgaccagtttaacagccacag
accactagttcacttgcatgtacaaggtgatatctaaacaaaactacact
actctcattgttacctgcttctctaagtcctcaaggtgagtgggggaggg
ccaccctcctcaggttagtataccttgccatcaacttgtaatgtagggaa
catctgaggtagtatcacatattggg
gaattcacgcagttgaatccttctcaacagtctgttttacgggaacactt
cattaccaccgttccccagctgaggagttctgaatccaggctggatcctt
ctcaacagtctgttttacgggaacacttcattaccaccattccccagctg
aagagttctgaattcacgcagttgaatccttctcaacagtctgttttacg
ggaacctttatgaccgtgacccgcagttctggttccggaatgagggatct
tccttgtgccggtgatggtaaccgtcctgggttttctcgtcccaggattt
ctcgtcccaggtcttctcgtcccaggtcttctcgtcccgggtttcggcac
caactcttacacgcgttctcgcgaccggccaggaagaacacaacaaacca
gaatcttctgcggcaaaagctttattgcttacatcttcaggagccagaga
gccagagagcaagagcaagaaaaagaacaagagcaagagagagcaagatt
gcaagagtgcaagagccagagcaagagcaagagcaagagagagaaaaaac
aagaacaagagagagagaaagaatggcaaaaccccgtcccttttaaggag
aattatcctccgcctaggacgtattactccctgattggctgcagcccatc
ggccgagttgtcatcatgagaaaggcagaacacatggcgggaaaactgcc
cctgcacgtgtgcagattatgtttaccacttagaacacagctgtcagcgc
catcttataatggcaaatgtgagggcggcttcccacaaaaaacaaatgaa
attatcagacacaaacctaaagaagcaaatgatttgggctgtgcatcatg
atccttgagcactgagtgctccttgtagaatgtctccagcagattccctg
caggaggtcagtgagagaatttaaagaaaaaaaaaaaactaaggacaaca
ccataacacaagcaagcctacacctttcttacctagtcattctgcctcat
taaagtccatgcccaaagccacctatcacaaatatggattaggactgatt
gaaattacagacctcattgctgcatgtctctctgacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116089035_116090111
seq2: B6Ng01-082I05.b_47_1122 (reverse)

seq1  CCCAATATGTGGATTCTTACCTCAGATTGTTTCCCTAC-TTACAAAGTTG  49
      |||||||||| ||| | ||||||||||   |||||||| |||| ||||||
seq2  CCCAATATGT-GATAC-TACCTCAGAT--GTTCCCTACATTAC-AAGTTG  45

seq1  ATGGCCAAGTATACTAACCCTGA-GAGGGTGTCCCT-CCCCACTCACC-T  96
      ||||| | ||||||||| ||||| ||||||| |||| ||||||||||| |
seq2  ATGGCAAGGTATACTAA-CCTGAGGAGGGTGGCCCTCCCCCACTCACCTT  94

seq1  GAGGACTTAGAGAAGCAGCTACAATTGAGAGTAGTGTAGTTATAGTTTAG  146
      |||||||||||||||||| ||  | |||||||||||||||| | ||||||
seq2  GAGGACTTAGAGAAGCAGGTAACAATGAGAGTAGTGTAGTT-TTGTTTAG  143

seq1  ATATCACCTTTGTCATGC-AGTGAACTAGTGGTCTGTGGCTGGTTAACTG  195
      ||||||||||   ||||| ||||||||||||||||||||||| | |||||
seq2  ATATCACCTTGTACATGCAAGTGAACTAGTGGTCTGTGGCTGTTAAACTG  193

seq1  GTCAATATACATCACCAACTTAATGGTCGG-ATATCCGAAATTACAGCAG  244
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTCAATATACATCACCAACTTAATGGTCGGAATATCCGAAATTACAGCAG  243

seq1  GCAATGTTAGTCCTGTGTCTTGATAGCTCAGTGTTATGCTTTCCGGGGCC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTTAGTCCTGTGTCTTGATAGCTCAGTGTTATGCTTTCCGGGGCC  293

seq1  CAGTGACTCAACCATGAATTCTGTTTCCAAGTCCAACTACTTCTCTACTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACTCAACCATGAATTCTGTTTCCAAGTCCAACTACTTCTCTACTA  343

seq1  CACACAGTAAGGCCTAGCCTTCAAACACAACTTTCCAGAGCTTATCTGTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTAAGGCCTAGCCTTCAAACACAACTTTCCAGAGCTTATCTGTT  393

seq1  ATCTAATCTAGAACCTCGGGCACTATCAGACTTAACTTACTCGAACTGGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATCTAGAACCTCGGGCACTATCAGACTTAACTTACTCGAACTGGA  443

seq1  GCAGCTGGCACCTTAGTTGGAACTTATTAAAGATCATTTTCATGCTTAAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGCACCTTAGTTGGAACTTATTAAAGATCATTTTCATGCTTAAG  493

seq1  TCTACATTTAGAAGTCAAGTGGAGGGCTGGGGATGTAGCTTAATGACAGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATTTAGAAGTCAAGTGGAGGGCTGGGGATGTAGCTTAATGACAGA  543

seq1  GCATGTTCCTAACATGCACAAAACACTGGGTTCAGTCTCCAGTAACACCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTCCTAACATGCACAAAACACTGGGTTCAGTCTCCAGTAACACCA  593

seq1  CCGCCACCACCCTCAAAGTTAGACATTAAATAGGTTTTAGGTTCTCTGGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCACCACCCTCAAAGTTAGACATTAAATAGGTTTTAGGTTCTCTGGA  643

seq1  ACCATCTGCCAAATGTATTCCAACCACCAACCTTCTCAGTTACACCATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTGCCAAATGTATTCCAACCACCAACCTTCTCAGTTACACCATTC  693

seq1  CCTAAAATCCTAAATAGATTCTCTGGCCTGCCTCCTAGTTAAGGAAGTCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATCCTAAATAGATTCTCTGGCCTGCCTCCTAGTTAAGGAAGTCT  743

seq1  AGCCCTGCTCTGATACAACCAAGGACTTCGAGGGAGTGACACTCTCCTGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGCTCTGATACAACCAAGGACTTCGAGGGAGTGACACTCTCCTGA  793

seq1  ACGCCTTTGCCGTTGTGGTCCTCCTAACTTAATTCTCAATCTCCAACTGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTTTGCCGTTGTGGTCCTCCTAACTTAATTCTCAATCTCCAACTGC  843

seq1  TTGCTAGAGTTGTTACCCTCCTCCCACTACATCTTGTCTCATATAGCCCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGAGTTGTTACCCTCCTCCCACTACATCTTGTCTCATATAGCCCA  893

seq1  TGTCCTACCTTCTGAGCTGCCCACGGCACTGCTCACAGAAGACGATGTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTACCTTCTGAGCTGCCCACGGCACTGCTCACAGAAGACGATGTCT  943

seq1  ATGACAGGGCAACAAGTAGAACCAATTAAAACATGATGATGGGGGGGTGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGGGCAACAAGTAGAACCAATTAAAACATGATGATGGGGGGGTGT  993

seq1  GCTTACCTTTAATCCCAGCACTCTGGAGGCAGAGGCAGACTGATCTCTGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCTTTAATCCCAGCACTCTGGAGGCAGAGGCAGACTGATCTCTGA  1043

seq1  GTTAGAGGCCAGCCTGGTCTACATAGTGAATTC  1077
      |||||||||||||||||||||||||||||||||
seq2  GTTAGAGGCCAGCCTGGTCTACATAGTGAATTC  1076

seq1: chr7_115973726_115974537
seq2: B6Ng01-082I05.g_362_1159

seq1  CCAGGATTTCTCGTCCCAGGTCTTCTCGTCCCAGGTCTTCTCGTCCCGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATTTCTCGTCCCAGGTCTTCTCGTCCCAGGTCTTCTCGTCCCGGG  50

seq1  TTTCGGCACCAACTCTTACACGCGTTCTCGCGACCGGCCAGGAAGAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGCACCAACTCTTACACGCGTTCTCGCGACCGGCCAGGAAGAACAC  100

seq1  AACAAACCAGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCAGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGG  150

seq1  AGCCAGAGAGCCAGAGAGCAAGAGCAAGAAAAAGAACAAGAGCAAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGAGCCAGAGAGCAAGAGCAAGAAAAAGAACAAGAGCAAGAGAG  200

seq1  AGCAAGATTGCAAGAGTGCAAGAGCCAGAGCAAGAGCAAGAGCAAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATTGCAAGAGTGCAAGAGCCAGAGCAAGAGCAAGAGCAAGAGAG  250

seq1  AGAAAAAACAAGAACAAGAGAGAGAGAAAGAATGGCAAAACCCCGTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAACAAGAACAAGAGAGAGAGAAAGAATGGCAAAACCCCGTCCCT  300

seq1  TTTAAGGAGAATTATCCTCCGCCTAGGACGTATTACTCCCTGATTGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGAGAATTATCCTCCGCCTAGGACGTATTACTCCCTGATTGGCTG  350

seq1  CAGCCCATCGGCCGAGTTGTCATCATGAGAAAGGCAGAACACATGGCGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATCGGCCGAGTTGTCATCATGAGAAAGGCAGAACACATGGCGGG  400

seq1  AAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACACAGC  450

seq1  TGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTTCCCACAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTTCCCACAAAAA  500

seq1  ACAAATGAAATTATCAGACACAAACCTAAAGAAGCAAATGATTT-GGCTG  549
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACAAATGAAATTATCAGACACAAACCTAAAGAAGCAAATGATTTGGGCTG  550

seq1  TGCATCATGATCCTTGAGCACTGAGGTGCTCCTTGTAGAATGTCTCCAGC  599
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCATCATGATCCTTGAGCACTGA-GTGCTCCTTGTAGAATGTCTCCAGC  599

seq1  AGATTCCCTGCAGGAGGTCAGTGAGGAGAAATTTAAAGAAAAAAAAAAAA  649
      |||||||||||||||||||||||| ||| |||||||||||||||||||||
seq2  AGATTCCCTGCAGGAGGTCAGTGA-GAG-AATTTAAAGAAAAAAAAAAAA  647

seq1  CTAAGGACAAACACATAACACAAGCAAAGCCTACA-CTTTCTTACCTAGT  698
      ||||||||||   |||||||||||| ||||||||| ||||||||||||||
seq2  CTAAGGACAACACCATAACACAAGC-AAGCCTACACCTTTCTTACCTAGT  696

seq1  CATTCTGCCTCATTAAAGTCCATGCCCCAAAGCCACCTATTCACAAATAT  748
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  CATTCTGCCTCATTAAAGTCCATG-CCCAAAGCCACCTA-TCACAAATAT  744

seq1  GATTTAGGGAACTGATTTGGAAAATTACAGACACTCATGTGCTGCAGTGG  798
      |  |||||  |||||||    ||||||||||| ||||| |||||||   |
seq2  GGATTAGG--ACTGATT---GAAATTACAGAC-CTCAT-TGCTGCA--TG  785

seq1  TCTCTCTGAGCAAA  812
      ||||||||| ||||
seq2  TCTCTCTGA-CAAA  798