BAC Information

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BAC

Clone NameB6Ng01-082O07
Chromosome7 (Build37)
Map Location 128,812,915 - 128,814,075
singlet/doubletsinglet
Overlap geneUsp31
Upstream gene4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2
Downstream geneScnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082O07.b
ACCDH897313
length1,139
definitionDH897313|Mus musculus domesticus DNA, BAC clone: B6Ng01-082O07, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttaaatgatgaacataatgtggaagtgtaagccctcccaactt
acttttggtcatggtgtttcatcacaataatagtaaccctaagacaactt
ttacctaccatgagtcaaaagtaaaaccagtacttaatttctacatgagc
ttaaagaacttgagacacttacatgggaatcatagcagacattagacatg
actttaaatggcacatgtaagattcttgaaggcggctttgtgtttgtcta
ttacctttctactgttgggtggcacaagggctgttcttcctgaggcagca
agtaagttattcccacgacactgaccacacgcaaactgaatgggcatacc
tgtatcaaatgtcaaatgagaattaggctgggcttagtcaagggcatgtt
tccaagcagcattttcaaaacagatcagacggacagcaaacagctcacct
tgcaaaatacttttccactttgaatacaaagcactcaaatgcaaattatt
tatcaagtatgtaaccattccattgctttcactagacactgatttaatgg
ttttctatgaataccttaatacagcaatagtaatttttaaaattacagaa
gttctatagtgtcttcactgatcatatggactagattggcaccataaagg
aacacaaagcaactctaggggaatttctacagtggcaactcctttcagaa
actggagataaattatcagttttgaaaaccccaacaaaagcagtttcact
gcactaaccgctgcttctgagtaaaaatcatgttctactgggatatcaaa
gtgcttacaaacctggatgctgacagtaggtctcaagaaatacttcatct
tctccaagatctccttctgcagaaaggtcccatgctactgtcttctctag
gtgcagacaaagggcagtccaaatctacacacaaacaatggggtcaccgt
aatacagcaatccctagagtgtaatcccctagtcttagtcttcttagatt
ggatcacaatctaactggttttagacagttcttaaacagagaaaaacagc
tacatggtcattctcataagagaccatagtcaaagaatgctcagactctt
agtacaatggctcttgtggagcacagagcatcgatgaac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128812915_128814075
seq2: B6Ng01-082O07.b_45_1183

seq1  GAATTCCTTAAATGATGAACATAATGTGGAAGTGTAAGCCCTCCCAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAATGATGAACATAATGTGGAAGTGTAAGCCCTCCCAACTT  50

seq1  ACTTTTGGTCATGGTGTTTCATCACAATAATAGTAACCCTAAGACAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGGTCATGGTGTTTCATCACAATAATAGTAACCCTAAGACAACTT  100

seq1  TTACCTACCATGAGTCAAAAGTAAAACCAGTACTTAATTTCTACATGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTACCATGAGTCAAAAGTAAAACCAGTACTTAATTTCTACATGAGC  150

seq1  TTAAAGAACTTGAGACACTTACATGGGAATCATAGCAGACATTAGACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAACTTGAGACACTTACATGGGAATCATAGCAGACATTAGACATG  200

seq1  ACTTTAAATGGCACATGTAAGATTCTTGAAGGCGGCTTTGTGTTTGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAATGGCACATGTAAGATTCTTGAAGGCGGCTTTGTGTTTGTCTA  250

seq1  TTACCTTTCTACTGTTGGGTGGCACAAGGGCTGTTCTTCCTGAGGCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTCTACTGTTGGGTGGCACAAGGGCTGTTCTTCCTGAGGCAGCA  300

seq1  AGTAAGTTATTCCCACGACACTGACCACACGCAAACTGAATGGGCATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTTATTCCCACGACACTGACCACACGCAAACTGAATGGGCATACC  350

seq1  TGTATCAAATGTCAAATGAGAATTAGGCTGGGCTTAGTCAAGGGCATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCAAATGTCAAATGAGAATTAGGCTGGGCTTAGTCAAGGGCATGTT  400

seq1  TCCAAGCAGCATTTTCAAAACAGATCAGACGGACAGCAAACAGCTCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCAGCATTTTCAAAACAGATCAGACGGACAGCAAACAGCTCACCT  450

seq1  TGCAAAATACTTTTCCACTTTGAATACAAAGCACTCAAATGCAAATTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATACTTTTCCACTTTGAATACAAAGCACTCAAATGCAAATTATT  500

seq1  TATCAAGTATGTAACCATTCCATTGCTTTCACTAGACACTGATTTAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGTATGTAACCATTCCATTGCTTTCACTAGACACTGATTTAATGG  550

seq1  TTTTCTATGAATACCTTAATACAGCAATAGTAATTTTTAAAATTACAGAA  600
      |||||||||||||||||                 ||||||||||||||||
seq2  TTTTCTATGAATACCTTNNNNNNNNNNNNNNNNNTTTTAAAATTACAGAA  600

seq1  GTTCTATAGTGTCTTCACTGATCATATGGACTAGATTGGCACCATAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATAGTGTCTTCACTGATCATATGGACTAGATTGGCACCATAAAGG  650

seq1  AACACAAAGCAACTCTAGGGGAATTTCTACAGTGGCAACTCCTTTCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAGCAACTCTAGGGGAATTTCTACAGTGGCAACTCCTTTCAGAA  700

seq1  ACTGGAGATAAATTATCAGTTTTGAAAACCCCAACAAAAGCAGTTTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGATAAATTATCAGTTTTGAAAACCCCAACAAAAGCAGTTTCACT  750

seq1  GCACTAACCGCTGCTTCTGAGTAAAAATCATGTTCTACTGGGATATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAACCGCTGCTTCTGAGTAAAAATCATGTTCTACTGGGATATCAAA  800

seq1  GTGCTTACAAACCTGGATGCTGACAGTAGGTCTCAAGAAATACTTCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTACAAACCTGGATGCTGACAGTAGGTCTCAAGAAATACTTCATCT  850

seq1  TCTCCAAGATCTCCTTCTGCAG-AAGGTCCCATGCTACTGTCTTCTCTAG  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTCCAAGATCTCCTTCTGCAGAAAGGTCCCATGCTACTGTCTTCTCTAG  900

seq1  GTGCAGGACAAAGGGCAGTCCAAATCTACAACACAAACAATGGGGTCACC  949
      ||||| ||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTGCA-GACAAAGGGCAGTCCAAATCTAC-ACACAAACAATGGGGTCACC  948

seq1  GTAATACAGCAATCCCTAGAGTTGTAATCCCCTAGTCTTAGTCTTCTTAG  999
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTAATACAGCAATCCCTAGAG-TGTAATCCCCTAGTCTTAGTCTTCTTAG  997

seq1  ATTGGATCACAATCTAACTGGTTTTAGGACAGTTCTTAAACAGAGAAAAA  1049
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTGGATCACAATCTAACTGGTTTTA-GACAGTTCTTAAACAGAGAAAAA  1046

seq1  ACAAGCTAACAATGGTCATTCTCATAAGGAGACCATAAGGTCAAAAGAAT  1099
         |||||   |||||||||||||||| |||||||||  ||| |||||| 
seq2  --CAGCTA--CATGGTCATTCTCATAA-GAGACCATA--GTC-AAAGAA-  1087

seq1  TGCTCAGGACTCTTAGGTAACAAATGGCTTCTGTGGAGCAACAAGAGGGC  1149
      |||||| |||||||| |||   |||||||  ||||||||    | || ||
seq2  TGCTCA-GACTCTTA-GTA--CAATGGCTCTTGTGGAGC----ACAGAGC  1129

seq1  ATCGAAGTGAAC  1161
      |||||  |||||
seq2  ATCGA--TGAAC  1139