BAC Information

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BAC

Clone NameB6Ng01-083D22
Chromosome7 (Build37)
Map Location 147,957,446 - 147,997,281
singlet/doubletdoublet
Overlap geneCyp2e1, Syce1, LOC100043529, BC066028
Upstream geneEG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912
Downstream gene1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083D22.bB6Ng01-083D22.g
ACCDH897562DH897563
length1,1391,074
definitionDH897562|Mus musculus domesticus DNA, BAC clone: B6Ng01-083D22, 5' end.DH897563|Mus musculus domesticus DNA, BAC clone: B6Ng01-083D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,957,446 - 147,958,600)(147,996,211 - 147,997,281)
sequence
gaattctgtgcctgaagcaggcacgggatcttaacacagtatgcagaggg
tcatacatacatttaccagatagaggaagtgtgaggatccctacatgtaa
gtcattggggctcacctttagtaaagaaactgggggggctgacaaactaa
ggggaaggtgctctaaggcctgaaaccttgccattctctgagctgggcat
agattgggcagctactgcatacaaagcaatgtttcccaagaacattattg
tgtgtctgtctggtccaggtctaagatctgagctctggccttcctgtcag
caatgcctttgactttccacaccacagagaaaaaaaaatggaatatgact
aaagtccaaggagggaaatatacaaattacagtagctagaacttttatta
ctgtgctagggaaacataaattttaaaatgttttaaattagtaacataat
ggatttctaaaatagtcaaggagtaagtaaatgtgacagctatctataca
tcgattaccaaattggacgtctattgacattttgtgatgtttgctttgga
gctatttttaaaatgaagcattatacggccagctagagccccactaactc
aaactcccctgcctcactccccagatacagtgatgcttcaggtccactat
gtagcatgcctgtgtgacatggacatttaatgttaactaaatatcaatgc
ataactaatattttattttatgcatgctttagtattataccataccatac
acaacttattgcaacttgcattttttttttactccacatattataaagtt
ccatagtaaatcccaaacacagaaagaccaaaggaacttgacaaaggttg
ctattgcctgtgtcatgatcatgggggcttttaaacttcattaactatgg
actagtctgtcaccctcttcctaatttaacaacagtaaactgtcctagag
taaacaatgcaaggtttccctctaagaggacatttccagacccttttatc
tctactgctgatggaaaaaatatcacaactatgtcaatagatgcccaaac
ttcctgtcactgtgatagcctcacagtcttagcttccactgcacttatag
aaatgattggcaatcaagtactcaggctaaacgtataat
gaattcacaccggagagaagccctacacgtgtgaagcctgcggcaaagcc
ttttccaggtggtcaggcctcaaataccataacagaactcatactggaga
gaagtgttcctaatgcaaagactatggcaagctgtgtgtgtgtgcacatg
tgtggacacatgtcactatgtgtggaaggctgaggttaatattgaattcc
tccattgctctaccttcttgttttttaaattacattaagtgccaggcagt
ggtggcatacgcctttcatcccaggacttgggaaacagaggcaggcggat
ttctgagttcgagtccagcctggtctacagagtgagttccaggacagcca
gggcgacacagagaaaccctgtctggaaaaaaccaaaaaagaaaaaaaaa
tacattaagcatgttgttttgtgtgttcatgtgtatgtatgtgcatgcat
gtgacatagttggggggttggttacatccttccatgtggtcttggggatc
taactcaggaggtcacacgaggtcacagttcctttatctgctgagccatc
ttactgacctcaccttattttttgatacaaagtctaattttttttaaaag
gatgtatttttatgtgtataatgtatgaatgtctgtgcatcacatgcact
gcccacagaagccagaagagggcatcagattccccggcagtggagttaca
ggcagttcttagagccagttggttgccgggaagcaaacccaggtcttctg
caagagcgagtgtgttcttaaccactaaacccactctccagtcttgtctt
aaacatttttaaataaataacttacttatatacttacttatttgtgtaag
cacagacgtctgttgctcagagttagagggcggcttgcacgagtcagttt
cttttttacctggttggtcccagggattggacttaggtcatttggcatgg
tggcaagtcatctcacagttctgagataagctttctcaatgaacctgagt
tcattggacttggaaccagcaagtcttcattattattattgtctacacct
cggggctagagttataacaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147957446_147958600
seq2: B6Ng01-083D22.b_44_1182

seq1  GAATTCTGTGCCTGAAGCAGGCACGGGATCTTAACACAGTATGCAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCCTGAAGCAGGCACGGGATCTTAACACAGTATGCAGAGGG  50

seq1  TCATACATACATTTACCAGATAGAGGAAGTGTGAGGATCCCTACATGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACATACATTTACCAGATAGAGGAAGTGTGAGGATCCCTACATGTAA  100

seq1  GTCATTGGGGCTCACCTTTAGTAAAGAAACTGGGGGGGCTGACAAACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGGGGCTCACCTTTAGTAAAGAAACTGGGGGGGCTGACAAACTAA  150

seq1  GGGGAAGGTGCTCTAAGGCCTGAAACCTTGCCATTCTCTGAGCTGGGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGTGCTCTAAGGCCTGAAACCTTGCCATTCTCTGAGCTGGGCAT  200

seq1  AGATTGGGCAGCTACTGCATACAAAGCAATGTTTCCCAAGAACATTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGGCAGCTACTGCATACAAAGCAATGTTTCCCAAGAACATTATTG  250

seq1  TGTGTCTGTCTGGTCCAGGTCTAAGATCTGAGCTCTGGCCTTCCTGTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGTCTGGTCCAGGTCTAAGATCTGAGCTCTGGCCTTCCTGTCAG  300

seq1  CAATGCCTTTGACTTTCCACACCACAGAGAAAAAAAAATGGAATATGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCTTTGACTTTCCACACCACAGAGAAAAAAAAATGGAATATGACT  350

seq1  AAAGTCCAAGGAGGGAAATATACAAATTACAGTAGCTAGAACTTTTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCAAGGAGGGAAATATACAAATTACAGTAGCTAGAACTTTTATTA  400

seq1  CTGTGCTAGGGAAACATAAATTTTAAAATGTTTTAAATTAGTAACATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAGGGAAACATAAATTTTAAAATGTTTTAAATTAGTAACATAAT  450

seq1  GGATTTCTAAAATAGTCAAGGAGTAAGTAAATGTGACAGCTATCTATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTAAAATAGTCAAGGAGTAAGTAAATGTGACAGCTATCTATACA  500

seq1  TCGATTACCAAATTGGACGTCTATTGACATTTTGTGATGTTTGCTTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTACCAAATTGGACGTCTATTGACATTTTGTGATGTTTGCTTTGGA  550

seq1  GCTATTTTTAAAATGAAGCATTATACGGCCAGCTAGAGCCCCACTAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTTAAAATGAAGCATTATACGGCCAGCTAGAGCCCCACTAACTC  600

seq1  AAACTCCCCTGCCTCACTCCCCAGATACAGTGATGCTTCAGGTCCACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCCCTGCCTCACTCCCCAGATACAGTGATGCTTCAGGTCCACTAT  650

seq1  GTAGCATGCCTGTGTGACATGGACATTTAATGTTAACTAAATATCAATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATGCCTGTGTGACATGGACATTTAATGTTAACTAAATATCAATGC  700

seq1  ATAACTAATATTTTATTTTATGCATGCTTTAGTATTATACCATACCATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAATATTTTATTTTATGCATGCTTTAGTATTATACCATACCATAC  750

seq1  ACAACTTATTGCAACTTGCA-TTTTTTTTTACTCCACATATTATAAAGTT  799
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACAACTTATTGCAACTTGCATTTTTTTTTTACTCCACATATTATAAAGTT  800

seq1  CCATAGTAAATCCCAAACACAGAAAGACC-AAGGAACTTGACAAAGGTTG  848
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCATAGTAAATCCCAAACACAGAAAGACCAAAGGAACTTGACAAAGGTTG  850

seq1  CTATTGCCTGTGTCATGATCATGGGGGCTTTTAAACTTCATTAACTATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCCTGTGTCATGATCATGGGGGCTTTTAAACTTCATTAACTATGG  900

seq1  ACTAGTCTGTCACCCTCTTCCTAATTTTAACAACAGTAAACTGTCCTAGA  948
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACTAGTCTGTCACCCTCTTCCTAA-TTTAACAACAGTAAACTGTCCTAGA  949

seq1  GTAAACAATGCAAAGGTTTCCCTCTAAGAAGACATTTCCAAGACCCTTTT  998
      ||||||||||| ||||||||||||||||| ||||||||| ||||||||||
seq2  GTAAACAATGC-AAGGTTTCCCTCTAAGAGGACATTTCC-AGACCCTTTT  997

seq1  ATCTCTACTGCTGATTGGAAAAAATATCACAAACTATGTCAATAGATGCC  1048
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  ATCTCTACTGCTGA-TGGAAAAAATATCAC-AACTATGTCAATAGATGCC  1045

seq1  CAAACTTCCTGTCAACTGTGAATAAGCTCACAGGTCTTAGCTTTCACTGG  1098
      ||||||||||||| |||||| |||  |||||| |||||||||| |||| |
seq2  CAAACTTCCTGTC-ACTGTG-ATAGCCTCACA-GTCTTAGCTTCCACT-G  1091

seq1  CACTTATAAGGAAATGATTTGGCAATTCAAAGTACTCAGGGCTTATAAAC  1148
      ||||||||  ||||||| ||||||||   |||||||||||     |||||
seq2  CACTTATA--GAAATGA-TTGGCAAT--CAAGTACTCAGG----CTAAAC  1132

seq1  GTATAAT  1155
      |||||||
seq2  GTATAAT  1139

seq1: chr7_147996211_147997281
seq2: B6Ng01-083D22.g_67_1140 (reverse)

seq1  CAATTTG-TATAACTCTAGCTCCGGAGGTGTAGACAATTAATATTATGAA  49
      ||||||| |||||||||||| || |||||||||||||| |  || |||||
seq2  CAATTTGTTATAACTCTAGC-CCCGAGGTGTAGACAATAATAATAATGAA  49

seq1  GGCTTGCTGG-TCCCAGT-CAATGAACTCCAGGTTCATTGAGAAAGCTTA  97
      | |||||||| ||| ||| ||||||||| |||||||||||||||||||||
seq2  GACTTGCTGGTTCCAAGTCCAATGAACT-CAGGTTCATTGAGAAAGCTTA  98

seq1  TCTCAGAACTTGTGAGATG-CCTGCCACCATGCCAAATGACCTAAGTCCA  146
      ||||||||| ||||||||| | ||||||||||||||||||||||||||||
seq2  TCTCAGAAC-TGTGAGATGACTTGCCACCATGCCAAATGACCTAAGTCCA  147

seq1  ATCCCTGGGACCAACCAGGTAGAAA--GAACTGACTCGTGCAAGCCGCCC  194
      ||||||||||||||||||||| |||   ||||||||||||||||||||||
seq2  ATCCCTGGGACCAACCAGGTAAAAAAGAAACTGACTCGTGCAAGCCGCCC  197

seq1  TCTAACTCTGAGC-ACAGACGTCTGTGCTTACACAAATAAGTAAGTATAT  243
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTAACTCTGAGCAACAGACGTCTGTGCTTACACAAATAAGTAAGTATAT  247

seq1  AAGTAAGTTATTTATTTAAAAATGTTTGAAGACAAGACTGGAGAGTTGGT  293
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  AAGTAAGTTATTTATTTAAAAATGTTT-AAGACAAGACTGGAGAGTGGGT  296

seq1  TTAGTGGTTAAGAACACACTCGCTCTTGCAGAAGACCTGGGTTTGCTTCC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTTAAGAACACACTCGCTCTTGCAGAAGACCTGGGTTTGCTTCC  346

seq1  CGGCAACCAACTGGCTCTAAGAACTGCCTGTAACTCCACTGCCGGGGAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAACCAACTGGCTCTAAGAACTGCCTGTAACTCCACTGCCGGGGAAT  396

seq1  CTGATGCCCTCTTCTGGCTTCTGTGGGCAGTGCATGTGATGCACAGACAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCCCTCTTCTGGCTTCTGTGGGCAGTGCATGTGATGCACAGACAT  446

seq1  TCATACATTATACACATAAAAATACATCCTTTTAAAAAAAATTAGACTTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACATTATACACATAAAAATACATCCTTTTAAAAAAAATTAGACTTT  496

seq1  GTATCAAAAAATAAGGTGAGGTCAGTAAGATGGCTCAGCAGATAAAGGAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAAAATAAGGTGAGGTCAGTAAGATGGCTCAGCAGATAAAGGAA  546

seq1  CTGTGACCTCGTGTGACCTCCTGAGTTAGATCCCCAAGACCACATGGAAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACCTCGTGTGACCTCCTGAGTTAGATCCCCAAGACCACATGGAAG  596

seq1  GATGTAACCAACCCCCCAACTATGTCACATGCATGCACATACATACACAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAACCAACCCCCCAACTATGTCACATGCATGCACATACATACACAT  646

seq1  GAACACACAAAACAACATGCTTAATGTATTTTTTTTTCTTTTTTGGTTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACACAAAACAACATGCTTAATGTATTTTTTTTTCTTTTTTGGTTTT  696

seq1  TTCCAGACAGGGTTTCTCTGTGTCGCCCTGGCTGTCCTGGAACTCACTCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGACAGGGTTTCTCTGTGTCGCCCTGGCTGTCCTGGAACTCACTCT  746

seq1  GTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTGCCTCTGTTTCCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGACTCGAACTCAGAAATCCGCCTGCCTCTGTTTCCCA  796

seq1  AGTCCTGGGATGAAAGGCGTATGCCACCACTGCCTGGCACTTAATGTAAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGGGATGAAAGGCGTATGCCACCACTGCCTGGCACTTAATGTAAT  846

seq1  TTAAAAAACAAGAAGGTAGAGCAATGGAGGAATTCAATATTAACCTCAGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAACAAGAAGGTAGAGCAATGGAGGAATTCAATATTAACCTCAGC  896

seq1  CTTCCACACATAGTGACATGTGTCCACACATGTGCACACACACACAGCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACACATAGTGACATGTGTCCACACATGTGCACACACACACAGCTT  946

seq1  GCCATAGTCTTTGCATTAGGAACACTTCTCTCCAGTATGAGTTCTGTTAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGTCTTTGCATTAGGAACACTTCTCTCCAGTATGAGTTCTGTTAT  996

seq1  GGTATTTGAGGCCTGACCACCTGGAAAAGGCTTTGCCGCAGGCTTCACAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTGAGGCCTGACCACCTGGAAAAGGCTTTGCCGCAGGCTTCACAC  1046

seq1  GTGTAGGGCTTCTCTCCGGTGTGAATTC  1071
      ||||||||||||||||||||||||||||
seq2  GTGTAGGGCTTCTCTCCGGTGTGAATTC  1074