BAC Information

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BAC

Clone NameB6Ng01-083E21
Chromosome7 (Build37)
Map Location 120,333,742 - 120,475,757
singlet/doubletdoublet
Overlap geneArntl, A630005I04Rik, Btbd10
Upstream geneMical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
Downstream genePth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083E21.bB6Ng01-083E21.g
ACCDH897604DH897605
length1,0681,112
definitionDH897604|Mus musculus domesticus DNA, BAC clone: B6Ng01-083E21, 5' end.DH897605|Mus musculus domesticus DNA, BAC clone: B6Ng01-083E21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,333,742 - 120,334,818)(120,474,650 - 120,475,757)
sequence
gaattcctcagagcacacatttgaagtatgcagttagacacactcacggt
ttctgactctgcaaatgtgaggcaggatctaggctcttgccttttcacgt
tcccaggagagtaactttgtggttcgaggctgatacttggagaatcaacg
gaacttaatattagaggagaaaggggagagagttttgttattttttgttt
attctgttgattttttgtttggttttgtttgcctttcaaggaagtgcctc
ttgtaatagtgctgtcaacttgacagaacgtagaacctcctaggaaggat
tacctagattaatctctgagaatgttttgagagattatcttaagcccatt
aattgatgtggaaagacccatcttaactgtgggtaagcctataccctgga
caggagaccctgaaccatacaaagtggagaaactgagctgagagcaagcc
agacagcaagcaagcaagcatccctccctctctgatccttgtttgtggtt
gggatgtgagcagctgcttcaagctcctgaggccttcctcgacttcccca
cctcgatggactgtacctggccttgcgctaaaatcagccctttcacactt
aagttgcttttgtaggatgtgcctatcacagcaaggtaaaaagaaatcaa
ggcagggtttctgtcttcaggctagcccgaaactgttgatcctcctgcct
ccacatccccagtgcttgcattagatgtagagtatgaatagagtagtgaa
tgaggagaagctgcacctctttgcgctaagatgcattgccttctttgaat
ggggagagggtcagagttattgtagttcattgattgcaggtgttggaagg
atagaggggtctggagcttagaatgtgctagttatctttcccaaagaggc
aacttaaaggagaaagggctgattttggcttatgtttggtggagcaccag
tccatcatggtagggagaccttgtgtgggagtggctaacagtctggcaga
ttgctcacacactattgatcagacaggaggtactggaatggagtgggcct
tataaccagcatgttgcc
gaattcctaaagccagtcagcagatatagaagaatacctatcaactttgt
ttaaaagaaaactgtttgattaactgtgaaatcaatttgaattgtcactt
tgacataaattttaattgtcagtttgttgtaaatatttaaggtggggagt
aaaggtaattgtcacttagaaaatgtgtagtaggtagttgtcttgagtag
ttaaagtttgcagtaatgagaaccacagtctcaggatttgttcaaaatgc
ctaaaatgagggttccacacttcattgtaatatcagtatttttgtctata
actaagatggaggatatcattgaaatagatgtttacatgaggcagaaatt
tgaagtattgaagtatgttcctactctgtttttgtgatgggtataggggc
tccaggaaggagggggataaagggaaagagagaaagaccaagtacagaat
caatgctggtgttgtgatattgtatacattttgagtaactaaatgatttt
tctaaatagcattgggcttgaatatgcatttccatgagtatgtatttttt
tttactatcatgagatgattagtagaagctattgacattgttctacttta
tttttatataaaaattggggagaaagtaggtatttgaaattttgcttcaa
ctgttttaagttggtgttcacattgaaaagagtagcatcccttttgtaaa
aagttgaagcgtttgaggagatgtgtgacattttattcttgatgctgttc
aggcagtggacgcctctgttcaggcagtgactgaagcttatctttgggga
ggaaaattaatatttcataggaactggaaagcacttggcattctttttgg
aaacttttaaaataaaaaacgctttgtttttcatggatttctgtgtataa
caaagaataacttacttaactactgagtaaattaatgaaatatttgtatt
ttactctgggaaatagtggcattattaatttcagaggctcaacttttttt
aataaataatgtagaatattctcttagtacttgcttgaaacggtattgca
gaaaacacctttttttaaaatggtttcattttctccattagttacaatga
gggccattaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120333742_120334818
seq2: B6Ng01-083E21.b_46_1113

seq1  GAATTCCTCAGAGCACACATTTGAAGTATGCAGTTAGACACACTCACGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGAGCACACATTTGAAGTATGCAGTTAGACACACTCACGGT  50

seq1  TTCTGACTCTGCAAATGTGAGGCAGGATCTAGGCTCTTGCCTTTTCACGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTCTGCAAATGTGAGGCAGGATCTAGGCTCTTGCCTTTTCACGT  100

seq1  TCCCAGGAGAGTAACTTTGTGGTTCGAGGCTGATACTTGGAGAATCAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGAGAGTAACTTTGTGGTTCGAGGCTGATACTTGGAGAATCAACG  150

seq1  GAACTTAATATTAGAGGAGAAAGGGGAGAGAGTTTTGTTATTTTTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAATATTAGAGGAGAAAGGGGAGAGAGTTTTGTTATTTTTTGTTT  200

seq1  ATTCTGTTGATTTTTTGTTTGGTTTTGTTTGCCTTTCAAGGAAGTGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTGATTTTTTGTTTGGTTTTGTTTGCCTTTCAAGGAAGTGCCTC  250

seq1  TTGTAATAGTGCTGTCAACTTGACAGAACGTAGAACCTCCTAGGAAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATAGTGCTGTCAACTTGACAGAACGTAGAACCTCCTAGGAAGGAT  300

seq1  TACCTAGATTAATCTCTGAGAATGTTTTGAGAGATTATCTTAAGCCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGATTAATCTCTGAGAATGTTTTGAGAGATTATCTTAAGCCCATT  350

seq1  AATTGATGTGGAAAGACCCATCTTAACTGTGGGTAAGCCTATACCCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGTGGAAAGACCCATCTTAACTGTGGGTAAGCCTATACCCTGGA  400

seq1  CAGGAGACCCTGAACCATACAAAGTGGAGAAACTGAGCTGAGAGCAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACCCTGAACCATACAAAGTGGAGAAACTGAGCTGAGAGCAAGCC  450

seq1  AGACAGCAAGCAAGCAAGCATCCCTCCCTCTCTGATCCTTGTTTGTGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCAAGCAAGCAAGCATCCCTCCCTCTCTGATCCTTGTTTGTGGTT  500

seq1  GGGATGTGAGCAGCTGCTTCAAGCTCCTGAGGCCTTCCTCGACTTCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTGAGCAGCTGCTTCAAGCTCCTGAGGCCTTCCTCGACTTCCCCA  550

seq1  CCTCGATGGACTGTACCTGGCCTTGCGCTAAAATCAGCCCTTTCACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGATGGACTGTACCTGGCCTTGCGCTAAAATCAGCCCTTTCACACTT  600

seq1  AAGTTGCTTTTGTAGGATGTGCCTATCACAGCAAGGTAAAAAGAAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTTTTGTAGGATGTGCCTATCACAGCAAGGTAAAAAGAAATCAA  650

seq1  GGCAGGGTTTCTGTCTTCAGGCTAGCCCGAAACTGTTGATCCTCCTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGTTTCTGTCTTCAGGCTAGCCCGAAACTGTTGATCCTCCTGCCT  700

seq1  CCACATCCCCAGTGCTTGCATTAGATGTAGAGTATGAATAGAGTAGTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCCCCAGTGCTTGCATTAGATGTAGAGTATGAATAGAGTAGTGAA  750

seq1  TGAGGAGAAGCTGCACCTCTTTGCGCTAAGATGCATTGCCTTCTTTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGAAGCTGCACCTCTTTGCGCTAAGATGCATTGCCTTCTTTGAAT  800

seq1  GGGGAGAGGGTCAGAGTTATTGTAGTTCATTGATTGCAGGTGTTGGAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGGGTCAGAGTTATTGTAGTTCATTGATTGCAGGTGTTGGAAGG  850

seq1  ATAGAGGGGTCTGGAGGCTTAGTAATGTGCTAGTTATC-TTCCCAAGGAG  899
      ||||||||||||||| |||||| ||||||||||||||| ||||||| |||
seq2  ATAGAGGGGTCTGGA-GCTTAG-AATGTGCTAGTTATCTTTCCCAAAGAG  898

seq1  GCAACTTAAAGGAGAAAGGGCTGATTTTGGCTCATGGTTTGGTGGAGCA-  948
      |||||||||||||||||||||||||||||||| || ||||||||||||| 
seq2  GCAACTTAAAGGAGAAAGGGCTGATTTTGGCTTAT-GTTTGGTGGAGCAC  947

seq1  CAGTCCATCATGGTAAGGAAGACCTTGTGTGGGAGTGGCTTACAGTCTGG  998
      |||||||||||||| ||| ||||||||||||||||||||| |||||||||
seq2  CAGTCCATCATGGT-AGGGAGACCTTGTGTGGGAGTGGCTAACAGTCTGG  996

seq1  CAGATTGCTCACACACTATCGGATCAGACAGGGAGGGAACTGGAAATGGA  1048
      |||||||||||||||||||  |||||||||||   || ||||| ||||| 
seq2  CAGATTGCTCACACACTAT-TGATCAGACAGG--AGGTACTGG-AATGG-  1041

seq1  AGTGGGCCTATTAAACCAGGCATGCTGCC  1077
      ||||||||| |  ||||| ||||| ||||
seq2  AGTGGGCCT-TATAACCA-GCATGTTGCC  1068

seq1: chr7_120474650_120475757
seq2: B6Ng01-083E21.g_66_1177 (reverse)

seq1  CATTATTGGCCCTACTGGTAACTAATGAGAAAAATGAAACAATTTTTAAA  50
      ||||| |||||||  | ||||||||||   |||||||||| ||||| |||
seq2  CATTAATGGCCCTCATTGTAACTAATGGAGAAAATGAAACCATTTTAAAA  50

seq1  AA--GTGTTCTTTGCAATAACGTTTCAAGC-AGTACTAAGA-AATATCTT  96
      ||  ||||| | ||||||| |||||||||| |||||||||| ||||| | 
seq2  AAAGGTGTTTTCTGCAATACCGTTTCAAGCAAGTACTAAGAGAATAT-TC  99

seq1  AAAATTATTAATTAAAAAAAGTTGAGCCTCTGAATTTAATAATGCCACTA  146
       | |||||| |||||||||||||||||||||||| |||||||||||||||
seq2  TACATTATTTATTAAAAAAAGTTGAGCCTCTGAAATTAATAATGCCACTA  149

seq1  TTT-CCAGAGT-AAATACAATTATTTCAATTATTTTACTCAGTAGTTTAA  194
      ||| ||||||| |||||||| |||||| |||| |||||||||||| ||||
seq2  TTTCCCAGAGTAAAATACAAATATTTC-ATTAATTTACTCAGTAG-TTAA  197

seq1  GTAGGTTATTCTTTGTTATAACACAGAAATCCATGAAAAACAAAGCGTTT  244
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTAAGTTATTCTTTGTTAT-ACACAGAAATCCATGAAAAACAAAGCGTTT  246

seq1  TTTATTTT-AAAGTTTCCAAAAAGAATGCCAAGTGCTTTCCAGTTCCTAT  293
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAAAAGTTTCCAAAAAGAATGCCAAGTGCTTTCCAGTTCCTAT  296

seq1  G-AATATTAATTTTCCTCCCCAAAGATAAGCTTCAGTCACTGCCTGAACA  342
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTAATTTTCCTCCCCAAAGATAAGCTTCAGTCACTGCCTGAACA  346

seq1  GAGGCGTCCACTGCCTGAACAGCATCAAGAATAAAATGTCACACATCTCC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGTCCACTGCCTGAACAGCATCAAGAATAAAATGTCACACATCTCC  396

seq1  TCAAACGCTTCAACTTTTTACAAAAGGGATGCTACTCTTTTCAATGTGAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACGCTTCAACTTTTTACAAAAGGGATGCTACTCTTTTCAATGTGAA  446

seq1  CACCAACTTAAAACAGTTGAAGCAAAATTTCAAATACCTACTTTCTCCCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACTTAAAACAGTTGAAGCAAAATTTCAAATACCTACTTTCTCCCC  496

seq1  AATTTTTATATAAAAATAAAGTAGAACAATGTCAATAGCTTCTACTAATC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATATAAAAATAAAGTAGAACAATGTCAATAGCTTCTACTAATC  546

seq1  ATCTCATGATAGTAAAAAAAAATACATACTCATGGAAATGCATATTCAAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGATAGTAAAAAAAAATACATACTCATGGAAATGCATATTCAAG  596

seq1  CCCAATGCTATTTAGAAAAATCATTTAGTTACTCAAAATGTATACAATAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGCTATTTAGAAAAATCATTTAGTTACTCAAAATGTATACAATAT  646

seq1  CACAACACCAGCATTGATTCTGTACTTGGTCTTTCTCTCTTTCCCTTTAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACACCAGCATTGATTCTGTACTTGGTCTTTCTCTCTTTCCCTTTAT  696

seq1  CCCCCTCCTTCCTGGAGCCCCTATACCCATCACAAAAACAGAGTAGGAAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCTTCCTGGAGCCCCTATACCCATCACAAAAACAGAGTAGGAAC  746

seq1  ATACTTCAATACTTCAAATTTCTGCCTCATGTAAACATCTATTTCAATGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCAATACTTCAAATTTCTGCCTCATGTAAACATCTATTTCAATGA  796

seq1  TATCCTCCATCTTAGTTATAGACAAAAATACTGATATTACAATGAAGTGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCATCTTAGTTATAGACAAAAATACTGATATTACAATGAAGTGT  846

seq1  GGAACCCTCATTTTAGGCATTTTGAACAAATCCTGAGACTGTGGTTCTCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCCTCATTTTAGGCATTTTGAACAAATCCTGAGACTGTGGTTCTCA  896

seq1  TTACTGCAAACTTTAACTACTCAAGACAACTACCTACTACACATTTTCTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCAAACTTTAACTACTCAAGACAACTACCTACTACACATTTTCTA  946

seq1  AGTGACAATTACCTTTACTCCCCACCTTAAATATTTACAACAAACTGACA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAATTACCTTTACTCCCCACCTTAAATATTTACAACAAACTGACA  996

seq1  ATTAAAATTTATGTCAAAGTGACAATTCAAATTGATTTCACAGTTAATCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTTATGTCAAAGTGACAATTCAAATTGATTTCACAGTTAATCA  1046

seq1  AACAGTTTTCTTTTAAACAAAGTTGATAGGTATTCTTCTATATCTGCTGA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTCTTTTAAACAAAGTTGATAGGTATTCTTCTATATCTGCTGA  1096

seq1  CTGGCTTTAGGAATTC  1108
      ||||||||||||||||
seq2  CTGGCTTTAGGAATTC  1112