BAC Information

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BAC

Clone NameB6Ng01-083J07
Chromosome7 (Build37)
Map Location 141,216,210 - 141,334,957
singlet/doubletdoublet
Overlap geneAdam12
Upstream geneCtbp2, LOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1
Downstream geneA130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699, LOC668750, Dock1, B830028B13Rik, EG668693
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083J07.bB6Ng01-083J07.g
ACCDH897804DH897805
length1,050836
definitionDH897804|Mus musculus domesticus DNA, BAC clone: B6Ng01-083J07, 5' end.DH897805|Mus musculus domesticus DNA, BAC clone: B6Ng01-083J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,334,376 - 141,334,957)(141,216,210 - 141,217,043)
sequence
gaattcattctttgttttctccatctttgaagtaagcaaggcaaggctgg
ggagatgggtcagcagtatgagatctgagttcccctgggaagtcacagca
gaggggctggaggcagctcagcacatcgttcctactgttgagaacaacga
gtgcttgcgctcagctcactccatccttctgtacagtcttagatcctagc
ccagggaatggtgctacccacagtgggtacttcctacctcaattaacctt
atcagtaaatcagtagccctgcacaggcatgtgtatatacttataatttc
aggcctggggaggcaaaaatgtgtgggtccttaggctttctgtccaggta
gcctaacctgctcaatgagctccaggtcaacaaagagatcctatctcaaa
aatcaaggtaaaagccgggcggtggtggcgcatgcctttaatcccagcac
tcgggaggcagaggcagaggcaggcggatttctgagttcgaggccagcct
ggtctacaaattgagttccaggacagccagggctatactgagaaaccctg
tctcgaaaataaacaaaaaacaacaacaacaaaaaaacaaacaaacaaac
aaaaaacaaggcaaatggcaccttaagaactataccaacctttacttctg
gctcccacatgcacatgttcacattttcacaaatacctgaacatgtgtaa
ctcacactcatagacacatacttaaatgcacatgcatactgtttttaaag
atccttgtgatgacattaactacttcccatggaaacattccaggttaacc
accccatctcaacaccctgtctcctaatcaccttcacagccctacttatc
acccgagttgagttattcctggtttcttgaaatggtgtatggaaaggaaa
gaggttattttcttcattttccctactaaggaactgagagtttatggttg
gttcacattgatctaagactactatctagctaaagtccatccacggtgtc
ctttcttaatgagacacgtgttttcagaaagtatgaagtagttctttgct

gaattctcctgcatacagtgcacaccgcttctgccagactattgtggatg
gccaggccattttgctttctctctctgctgagccttgtgggtccatttgg
ttccctaaagcctgtgtcctccttgtctgaatctgcagtgcacttctttc
ttcctctccatggccgttcagtaaccctagctccacaagtgtcctcttct
tgtgtcagagtgaccttcctgcctcttctttctcaccctgcatctcctat
ttgcccatcttctgggccctgcgtgatccttagttgctcaggggtttgtc
tgaggtgtacagtcccatcagggcaaaggctgtctctcccctcggttctt
acactagtgcttccaagttagtgtgtgctccgtagatgtgtgttgagtga
gctgtgtgttagttactgctgcatggctgtgactaaagtccccacagaca
gctgaaggaggtaggggttatgttggctcatggtttcgaagagttcatgc
actggtatttatagaatacctcatagtttctgtagtcaaacctgggtcgg
ataagaccttacatgtttaattcagtatgttactccctggacacatgccc
attttattggacaaaatggtacaatgttattaggcatgtggggttgggga
gagtcttcatgtcagagagaaaggagaatggatgagcagagccaacatcc
ccctagagacctgtcttcaactatctactccctccaaccaggccttacct
cctcaagccttcacaatctcccaaatgctcactagcagctggggacctag
gcttttagatagcctgggggaggagggggaggcggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_141334376_141334957
seq2: B6Ng01-083J07.b_44_625 (reverse)

seq1  TTGTTGTTGTTGTTTTTTGTTTATTTTCGAGACAGGGTTTCTCAGTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTGTTTTTTGTTTATTTTCGAGACAGGGTTTCTCAGTATAG  50

seq1  CCCTGGCTGTCCTGGAACTCAATTTGTAGACCAGGCTGGCCTCGAACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGTCCTGGAACTCAATTTGTAGACCAGGCTGGCCTCGAACTCA  100

seq1  GAAATCCGCCTGCCTCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCGCCTGCCTCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCA  150

seq1  TGCGCCACCACCGCCCGGCTTTTACCTTGATTTTTGAGATAGGATCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCACCACCGCCCGGCTTTTACCTTGATTTTTGAGATAGGATCTCTT  200

seq1  TGTTGACCTGGAGCTCATTGAGCAGGTTAGGCTACCTGGACAGAAAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACCTGGAGCTCATTGAGCAGGTTAGGCTACCTGGACAGAAAGCCT  250

seq1  AAGGACCCACACATTTTTGCCTCCCCAGGCCTGAAATTATAAGTATATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCCACACATTTTTGCCTCCCCAGGCCTGAAATTATAAGTATATAC  300

seq1  ACATGCCTGTGCAGGGCTACTGATTTACTGATAAGGTTAATTGAGGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCTGTGCAGGGCTACTGATTTACTGATAAGGTTAATTGAGGTAGG  350

seq1  AAGTACCCACTGTGGGTAGCACCATTCCCTGGGCTAGGATCTAAGACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCCACTGTGGGTAGCACCATTCCCTGGGCTAGGATCTAAGACTGT  400

seq1  ACAGAAGGATGGAGTGAGCTGAGCGCAAGCACTCGTTGTTCTCAACAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGATGGAGTGAGCTGAGCGCAAGCACTCGTTGTTCTCAACAGTA  450

seq1  GGAACGATGTGCTGAGCTGCCTCCAGCCCCTCTGCTGTGACTTCCCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGATGTGCTGAGCTGCCTCCAGCCCCTCTGCTGTGACTTCCCAGGG  500

seq1  GAACTCAGATCTCATACTGCTGACCCATCTCCCCAGCCTTGCCTTGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGATCTCATACTGCTGACCCATCTCCCCAGCCTTGCCTTGCTTA  550

seq1  CTTCAAAGATGGAGAAAACAAAGAATGAATTC  582
      ||||||||||||||||||||||||||||||||
seq2  CTTCAAAGATGGAGAAAACAAAGAATGAATTC  582

seq1: chr7_141216210_141217043
seq2: B6Ng01-083J07.g_69_903

seq1  GAATTCTCCTGCATACAGTGCACACCGCTTCTGCCAGACTATTGTGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCATACAGTGCACACCGCTTCTGCCAGACTATTGTGGATG  50

seq1  GCCAGGCCATTTTGCTTTCTCTCTCTGCTGAGCCTTGTGGGTCCATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCCATTTTGCTTTCTCTCTCTGCTGAGCCTTGTGGGTCCATTTGG  100

seq1  TTCCCTAAAGCCTGTGTCCTCCTTGTCTGAATCTGCAGTGCACTTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAAAGCCTGTGTCCTCCTTGTCTGAATCTGCAGTGCACTTCTTTC  150

seq1  TTCCTCTCCATGGCCGTTCAGTAACCCTAGCTCCACAAGTGTCCTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCATGGCCGTTCAGTAACCCTAGCTCCACAAGTGTCCTCTTCT  200

seq1  TGTGTCAGAGTGACCTTCCTGCCTCTTCTTTCTCACCCTGCATCTCCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGAGTGACCTTCCTGCCTCTTCTTTCTCACCCTGCATCTCCTAT  250

seq1  TTGCCCATCTTCTGGGCCCTGCGTGATCCTTAGTTGCTCAGGGGTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCATCTTCTGGGCCCTGCGTGATCCTTAGTTGCTCAGGGGTTTGTC  300

seq1  TGAGGTGTACAGTCCCATCAGGGCAAAGGCTGTCTCTCCCCTCGGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGTACAGTCCCATCAGGGCAAAGGCTGTCTCTCCCCTCGGTTCTT  350

seq1  ACACTAGTGCTTCCAAGTTAGTGTGTGCTCCGTAGATGTGTGTTGAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGTGCTTCCAAGTTAGTGTGTGCTCCGTAGATGTGTGTTGAGTGA  400

seq1  GCTGTGTGTTAGTTACTGCTGCATGGCTGTGACTAAAGTCCCCACAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGTTAGTTACTGCTGCATGGCTGTGACTAAAGTCCCCACAGACA  450

seq1  GCTGAAGGAGGTAGGGGTTATGTTGGCTCATGGTTTCGAAGAGTTCATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGAGGTAGGGGTTATGTTGGCTCATGGTTTCGAAGAGTTCATGC  500

seq1  ACTGGTATTTATAGAATACCTCATAGTTTCTGTAGTCAAACCTGGGTCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTATTTATAGAATACCTCATAGTTTCTGTAGTCAAACCTGGGTCGG  550

seq1  ATAAGACCTTACATGTTTAATTCAGTATGTTACTCCCTGGACACATGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACCTTACATGTTTAATTCAGTATGTTACTCCCTGGACACATGCCC  600

seq1  ATTTTATTGGACAAAATGGTACAATGTTATTAGGCATGTGGGGTTGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGGACAAAATGGTACAATGTTATTAGGCATGTGGGGTTGGGGA  650

seq1  GAGTCTTCATGTCAGAGAGAAAGGAGAATGGATGAGCAGAGCCAACATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTCATGTCAGAGAGAAAGGAGAATGGATGAGCAGAGCCAACATCC  700

seq1  CCCTAGAGACCTGTCTTCAACTATCTACTCCCTCCAACCAGGCCTTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAGACCTGTCTTCAACTATCTACTCCCTCCAACCAGGCCTTACCT  750

seq1  CCTCAAGCCTTCACAATCTCCCAAATGCTCACTAGCAGCTGGGGACCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGCCTTCACAATCTCCCAAATGCTCACTAGCAGCTGGGGACCTAG  800

seq1  GCTTTAAGATAGCCT-GGGGAGGAGGGGGAGGCGG  834
      ||||| ||||||||| |||||||||||||||||||
seq2  GCTTTTAGATAGCCTGGGGGAGGAGGGGGAGGCGG  835