BAC Information

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BAC

Clone NameB6Ng01-083N07
Chromosome7 (Build37)
Map Location 65,554,067 - 65,687,076
singlet/doubletdoublet
Overlap genenone
Upstream geneGabrg3, Gabra5, Gabrb3, EG668807, LOC434189
Downstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083N07.bB6Ng01-083N07.g
ACCDH897983DH897984
length1,170605
definitionDH897983|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N07, 5' end.DH897984|Mus musculus domesticus DNA, BAC clone: B6Ng01-083N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,554,067 - 65,555,263)(65,686,473 - 65,687,076)
sequence
gaattccatattattttacaacattatattctgccttgggaattgcaccc
taaaccaatgaacttccatctggaattggaggttggtttttaagactgga
tctcaaggcatatatttctagcaatagctcttggcatgaattctcatgac
tttctccatcaggtatgtaagtacatggttgggcacagatgacagtgatc
atttcaggtttttccatttgcagcctagtattttctcattctgctgacag
cagcagtgttctttagcattactatttccacagtgtcagtgggagtttaa
atagtgaggaggtttaccagggttcatttatgcatctgtagccaggaaat
ccatggctgcaattgctcttgggagctatgaatatctctcagccattaaa
tataactcctttctaaggcatcccactgacttagcaaaggtcctattgaa
caggttagaattcctggggaaatatcattttcctcaatgacatacaggga
aagttggagtgagtgagcaatgccagaatagtaattccagtaaacacatc
cttgagttcttacaaggaactatcagcctttgatcccatgttattggggc
tgaggacatgttaggaggtggtatacagttctagtcagttctgaaaattt
aaattcaagattctgtagaagtctattaccccaaggaagactcaattgcc
tagcagtctgaggagagggtatctcaaaatagcctggttttggctaaaac
tcaggatatacctttttcttttcaatatcatccccaagtatatgactcaa
gattgacagagttgggccttttctagagaaacctcatatcccatattgtt
agagatttgagaagagaatcaattccctgaaagaatactcagatgttctg
cggaatagcaactcatctacatattggaacaggtttgtatgggaccttga
tctgtcatgagatccttgccaagaccaataaatgggagttgttctttaat
ctaggagacatcgtgagtacttgtctcatttacaaatgatccgcaaagat
aaagaagactgacttttgactattcgggtgcatggttagaagagcatctt
catcttgaacagtatggagttaatctgatatggatgccttaagaactgag
taagggacatagccattacc
gaattctgagtgtttgaacaagtgagtctctgattcttgtatcttctctt
aagctcttttccttcttttggtttgcttgtcgaaatccaatgtgctagtt
tttattttattttattattttaccttataagcctttatgttttctttttt
tataaaagacttatttatttattttatgtatgcgactacactgtagctgt
acagatagttggttgtgagccttcatatggttgttgggaattgaattttt
aggatctctgctctctctggtcaaccctgttcactccacccaaagattcg
cttattattatatataagtacactgtagctgacttcagatccaccaaaag
agggcatcagatctcatcccaccatgtggttgctgggatttgaattcagg
accttgggaagagcagtcagtactcttacctgctaagctgtctctccagc
ccccacctctggcttcttgtattctaatgagagataaaaaggagtggttc
cagatgggaggggaggttgggaggaatcaggaggagtagagggaagggaa
atcaaccagttttatattatattataaaatactattcattttaatggaaa
gatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65554067_65555263
seq2: B6Ng01-083N07.b_46_1215

seq1  GAATTCCATATTATTTTACAACATTATATTCTGCCTTGGGAATTGCACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTATTTTACAACATTATATTCTGCCTTGGGAATTGCACCC  50

seq1  TAAACCAATGAACTTCCATCTGGAATTGGAGGTTGGTTTTTAAGACTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAATGAACTTCCATCTGGAATTGGAGGTTGGTTTTTAAGACTGGA  100

seq1  TCTCAAGGCATATATTTCTAGCAATAGCTCTTGGCATGAATTCTCATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGCATATATTTCTAGCAATAGCTCTTGGCATGAATTCTCATGAC  150

seq1  TTTCTCCATCAGGTATGTAAGTACATGGTTGGGCACAGATGACAGTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCATCAGGTATGTAAGTACATGGTTGGGCACAGATGACAGTGATC  200

seq1  ATTTCAGGTTTTTCCATTTGCAGCCTAGTATTTTCTCATTCTGCTGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGGTTTTTCCATTTGCAGCCTAGTATTTTCTCATTCTGCTGACAG  250

seq1  CAGCAGTGTTCTTTAGCATTACTATTTCCACAGTGTCAGTGGGAGTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGTTCTTTAGCATTACTATTTCCACAGTGTCAGTGGGAGTTTAA  300

seq1  ATAGTGAGGAGGTTTACCAGGGTTCATTTATGCATCTGTAGCCAGGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAGGAGGTTTACCAGGGTTCATTTATGCATCTGTAGCCAGGAAAT  350

seq1  CCATGGCTGCAATTGCTCTTGGGAGCTATGAATATCTCTCAGCCATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCTGCAATTGCTCTTGGGAGCTATGAATATCTCTCAGCCATTAAA  400

seq1  TATAACTCCTTTCTAAGGCATCCCACTGACTTAGCAAAGGTCCTATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCCTTTCTAAGGCATCCCACTGACTTAGCAAAGGTCCTATTGAA  450

seq1  CAGGTTAGAATTCCTGGGGAAATATCATTTTCCTCAATGACATACAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAGAATTCCTGGGGAAATATCATTTTCCTCAATGACATACAGGGA  500

seq1  AAGTTGGAGTGAGTGAGCAATGCCAGAATAGTAATTCCAGTAAACACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGAGTGAGTGAGCAATGCCAGAATAGTAATTCCAGTAAACACATC  550

seq1  CTTGAGTTCTTACAAGGAACTATCAGCCTTTGATCCCATGTTATTGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTCTTACAAGGAACTATCAGCCTTTGATCCCATGTTATTGGGGC  600

seq1  TGAGGACATGTTAGGAGGTGGTATACAGTTCTAGTCAGTTCTGAAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACATGTTAGGAGGTGGTATACAGTTCTAGTCAGTTCTGAAAATTT  650

seq1  AAATTCAAGATTCTGTAGAAGTCTATTACCCCAAGGAAGACTCAATTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGATTCTGTAGAAGTCTATTACCCCAAGGAAGACTCAATTGCC  700

seq1  TAGCAGTCTGAGGAGAGGGTATCTCAAAATAGCCTGGTTTTGGCTAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTCTGAGGAGAGGGTATCTCAAAATAGCCTGGTTTTGGCTAAAAC  750

seq1  TCAGGATATACCTTTTTCTTTTCAATATCATCCCCAAGTATATGACTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATATACCTTTTTCTTTTCAATATCATCCCCAAGTATATGACTCAA  800

seq1  GATTGACAGAGTTGGGCCTTTTCTAGAGAAACCTCATATCCCATATTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACAGAGTTGGGCCTTTTCTAGAGAAACCTCATATCCCATATTGTT  850

seq1  AGAGATTTGAGAAGAGAATCAATTCCCTGAAAGAATACTCAGATGTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTGAGAAGAGAATCAATTCCCTGAAAGAATACTCAGATGTTCTG  900

seq1  CGGAATAGCAACTCATCTACATATTGGAACAGGTTTGTATGGGACCTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATAGCAACTCATCTACATATTGGAACAGGTTTGTATGGGACCTTGA  950

seq1  TCTGTCATGAGATCCTTGCCAAGACCAATAAATGGGAGTTGTTCTTTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCATGAGATCCTTGCCAAGACCAATAAATGGGAGTTGTTCTTTAAT  1000

seq1  CTTAGGGAGAACATCGTTGAAGTAACTTGTCTCATTTACAAATTGGATCC  1050
      ||   |||| |||||||   ||| |||||||||||||||||||  |||||
seq2  CT--AGGAG-ACATCGT--GAGT-ACTTGTCTCATTTACAAAT--GATCC  1042

seq1  GCAAAGATAAAGAAGGACTGACTTTTGACTATTCGGGTGCAATGGGTTAA  1100
      |||||||||||||| ||||||||||||||||||||||||||   ||||  
seq2  GCAAAGATAAAGAA-GACTGACTTTTGACTATTCGGGTGCA--TGGTT--  1087

seq1  AGAAGAAGGCATCTTTCAAATCTGAGACAAGTTATGAAGTATAATCTGGA  1150
      ||||||  |||||||    ||||   |||   |||| ||| |||||| ||
seq2  AGAAGA--GCATCTT---CATCTTGAACA--GTATGGAGT-TAATCT-GA  1128

seq1  TTATGAGGGCTTAAGAACTGAGTAAAGGGGGACAATAGCTCATTACC  1197
      |   || | ||||||||||||||||   ||||| ||||| |||||||
seq2  TATGGATGCCTTAAGAACTGAGTAA---GGGAC-ATAGC-CATTACC  1170

seq1: chr7_65686473_65687076
seq2: B6Ng01-083N07.g_68_672 (reverse)

seq1  ATTTCTTTCCATTTTATTGAATAGTCTTTTCTTATATAATAT-AAACTGG  49
      || ||||||||||  | |||||||| |||| | ||||||||| |||||||
seq2  ATATCTTTCCATTAAAATGAATAGTATTTTATAATATAATATAAAACTGG  50

seq1  TTGATTTCCCTTCCCTCTACTCCTCCTGATTCCTCCCAACCTCCCCTCCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCCCTTCCCTCTACTCCTCCTGATTCCTCCCAACCTCCCCTCCC  100

seq1  ATCTGGAACCACTCCTTTTTATCTCTCATTAGAATACAAGAAGCCAGAGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAACCACTCCTTTTTATCTCTCATTAGAATACAAGAAGCCAGAGG  150

seq1  TGGGGGCTGGAGAGACAGCTTAGCAGGTAAGAGTACTGACTGCTCTTCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTGGAGAGACAGCTTAGCAGGTAAGAGTACTGACTGCTCTTCCC  200

seq1  AAGGTCCTGAATTCAAATCCCAGCAACCACATGGTGGGATGAGATCTGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCTGAATTCAAATCCCAGCAACCACATGGTGGGATGAGATCTGAT  250

seq1  GCCCTCTTTTGGTGGATCTGAAGTCAGCTACAGTGTACTTATATATAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTTTGGTGGATCTGAAGTCAGCTACAGTGTACTTATATATAATA  300

seq1  ATAAGCGAATCTTTGGGTGGAGTGAACAGGGTTGACCAGAGAGAGCAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCGAATCTTTGGGTGGAGTGAACAGGGTTGACCAGAGAGAGCAGAG  350

seq1  ATCCTAAAAATTCAATTCCCAACAACCATATGAAGGCTCACAACCAACTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAAAATTCAATTCCCAACAACCATATGAAGGCTCACAACCAACTA  400

seq1  TCTGTACAGCTACAGTGTAGTCGCATACATAAAATAAATAAATAAGTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACAGCTACAGTGTAGTCGCATACATAAAATAAATAAATAAGTCTT  450

seq1  TTATAAAAAAAGAAAACATAAAGGCTTATAAGGTAAAATAATAAAATAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAAAAGAAAACATAAAGGCTTATAAGGTAAAATAATAAAATAAA  500

seq1  ATAAAAACTAGCACATTGGATTTCGACAAGCAAACCAAAAGAAGGAAAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACTAGCACATTGGATTTCGACAAGCAAACCAAAAGAAGGAAAAG  550

seq1  AGCTTAAGAGAAGATACAAGAATCAGAGACTCACTTGTTCAAACACTCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAAGAGAAGATACAAGAATCAGAGACTCACTTGTTCAAACACTCAG  600

seq1  AATTC  604
      |||||
seq2  AATTC  605