BAC Information

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BAC

Clone NameB6Ng01-083O21
Chromosome7 (Build37)
Map Location 21,360,226 - 21,360,877
singlet/doubletsinglet
Overlap genenone
Upstream geneCblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559
Downstream geneLOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083O21.bB6Ng01-083O21.g
ACCDH898047DH898048
length1,173652
definitionDH898047|Mus musculus domesticus DNA, BAC clone: B6Ng01-083O21, 5' end.DH898048|Mus musculus domesticus DNA, BAC clone: B6Ng01-083O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggcctgagcatctgctggagacatattggttcccggacacca
ccgagactagtctgcacaggtgagagtgtggactacagaagctaacagct
tctgggacacatgggagccacagagcttctgaggcaggccccttttcggg
ctccagaaatctgggcatcttccctgccagaggataggttgactgcctgg
cccaggagggctttgcaggagtacctggaggagccatcttggtttccaga
tcctttgagactagtctgtgcttgtgagagtgtggactacagaagctaac
aacttctgtgacaggccaaagtaacacagcatctgggacagatcctgttt
tgggccttcatcttcggccgggagggaggtccaaaagccagatatctgtg
caccttccctggaagaggagagcttgcctgcagagattgctctgacctct
gaaactcagaggagagagctagtctcccagatctgctgatagaggctaac
agaaacatgagagcaacaatctctaaccaacgaattagaaaggacaatct
gcaaattcatctggaataacaaaaaacttaggatagcaaaatctcttctc
aaggatagaagaatctctggtggaatcaccatgcctgacataaaatagta
ctacagagcaattgtggtaaaaactgcatggtactggtatagcgacatag
aagtagaccaatggaatagaattgaagacccagaaatgaacccacacacc
tatggtcacttgatcttcgacaagggagcaaaaaccatccagtggaagaa
agacagcatttttaacaattggtgctggcacaactgtttgttatcatgta
gaagaatgcgaattgatccatacttatctccttgtactaaggtcaaatct
aagtggattaaggaactccacataaaccagagacactgaaacttatagag
agaagtagggaaaaccctcaaagatgtgggttcaggggaaaattcctgaa
tagaacagcaatggcttgtttctgtaaatcgagattcacaaatgtgacct
catgaactgcaaagcttcttcaaggctaagaaccggtcataagacaaagt
caccacaactgaagagttaccatctatccgatggacctaatcatatatta
tagacccaggaggtgaactcgga
gaattcttgagaatcttgagaaggtatttgtgtgagatccccaagatggc
ctgtggtggctcctgctttgcctgctgctgtcagttccctttgcggctgt
acctgctcctgattttgctattgatgaattgttgtttggctgtcttgttt
gacttctggttagagatatcatgatgatagattttggacttaccaaaacc
aacatcagatgtctacacaccttttcctctctaacttttctttactactg
agtgttggttggaaatattgtggtgaaaaatgtgatggatgggtagtaga
tagtacaatccaatgaagtacaacaaactaatgcttagatataagggtat
acagagtttaacaggcagagatcagtgttataggatacattgaactgatt
aaactgaacttagaaaatacactttttcttttcggtgtgtggacatgttc
aagcacagatttgaggaaggcagagtacaattgtaggattttgttctctc
cactaggtaggacctgggataatcatttctaagttgtgagtgctttagct
gctgagctgtattgctgattcttattatggctagtgttatgatcaagact
tggtgctgtgggattgtcagttttttttgttggtagagttttgtgaaatg
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21360226_21360877
seq2: B6Ng01-083O21.g_71_722 (reverse)

seq1  TACATTTTCACAGACCTCTACCAAC-AATAAAACTGACAATCCCACAGCA  49
      |||| ||||||| | |||||||||| || |||||||||||||||||||||
seq2  TACA-TTTCACAAAACTCTACCAACAAAAAAAACTGACAATCCCACAGCA  49

seq1  CCAAGTCTTGATCATAACACTGGCCATAATAAGAATCAGCAATACAGCTC  99
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCAAGTCTTGATCATAACACTAGCCATAATAAGAATCAGCAATACAGCTC  99

seq1  AGCAGCTAAAGCACTCACAACTTAGAAATGATTATCCCAGGTCCTACCTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTAAAGCACTCACAACTTAGAAATGATTATCCCAGGTCCTACCTA  149

seq1  GTGGAGAGAACAAAATCCTACAATTGTACTCTGCCTTCCTCAAATCTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAGAACAAAATCCTACAATTGTACTCTGCCTTCCTCAAATCTGTG  199

seq1  CTTGAACATGTCCACACACCGAAAAGAAAAAGTGTATTTTCTAAGTTCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACATGTCCACACACCGAAAAGAAAAAGTGTATTTTCTAAGTTCAG  249

seq1  TTTAATCAGTTCAATGTATCCTATAACACTGATCTCTGCCTGTTAAACTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAGTTCAATGTATCCTATAACACTGATCTCTGCCTGTTAAACTC  299

seq1  TGTATACCCTTATATCTAAGCATTAGTTTGTTGTACTTCATTGGATTGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACCCTTATATCTAAGCATTAGTTTGTTGTACTTCATTGGATTGTA  349

seq1  CTATCTACTACCCATCCATCACATTTTTCACCACAATATTTCCAACCAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTACTACCCATCCATCACATTTTTCACCACAATATTTCCAACCAAC  399

seq1  ACTCAGTAGTAAAGAAAAGTTAGAGAGGAAAAGGTGTGTAGACATCTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTAGTAAAGAAAAGTTAGAGAGGAAAAGGTGTGTAGACATCTGAT  449

seq1  GTTGGTTTTGGTAAGTCCAAAATCTATCATCATGATATCTCTAACCAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTTTGGTAAGTCCAAAATCTATCATCATGATATCTCTAACCAGAA  499

seq1  GTCAAACAAGACAGCCAAACAACAATTCATCAATAGCAAAATCAGGAGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACAAGACAGCCAAACAACAATTCATCAATAGCAAAATCAGGAGCA  549

seq1  GGTACAGCCGCAAAGGGAACTGACAGCAGCAGGCAAAGCAGGAGCCACCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGCCGCAAAGGGAACTGACAGCAGCAGGCAAAGCAGGAGCCACCA  599

seq1  CAGGCCATCTTGGGGATCTCACACAAATACCTTCTCAAGATTCTCAAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCATCTTGGGGATCTCACACAAATACCTTCTCAAGATTCTCAAGAA  649

seq1  TTC  652
      |||
seq2  TTC  652