BAC Information

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BAC

Clone NameB6Ng01-084F17
Chromosome7 (Build37)
Map Location 64,984,885 - 65,163,385
singlet/doubletdoublet
Overlap geneGabrb3, EG668807, LOC434189
Upstream geneGabrg3, Gabra5
Downstream geneAtp10a, LOC621446
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084F17.bB6Ng01-084F17.g
ACCDH898341DH898342
length1,2711,000
definitionDH898341|Mus musculus domesticus DNA, BAC clone: B6Ng01-084F17, 5' end.DH898342|Mus musculus domesticus DNA, BAC clone: B6Ng01-084F17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,984,885 - 64,986,163)(65,162,836 - 65,163,385)
sequence
gaattcttttttaatagtcaatccataggggattaatgagaggtgggggg
tagacatgacttagaaaacaaatattggaatggccaacttagcatatcat
taattcgtccaacttcaagtgtgttgaataaataagttagaagacaagaa
tttataaaatggttgtcagtaagttttgccttgctggacatgcacaaata
gtttattcttcacgcacccaacaaactccttccaccctgtgttgtgcctc
acaaggacatctgctacgcaggccaggggacttggcaaacaagtgaccta
aacacatctgatgtctaaagagaagcaagggagacttgctgtctaatggc
atctaggctaggtttattatatgattctgagatactacttttcctgtagt
gacccccttcactaggtcagcaaaaatgaaatgtgtctggcgacttttgt
aaacttaatgcattgctacattttgaaaatgtctgcaaacataatgcact
gtgaatataaggcagtgttcagtaaacagttgaaaatctttcataccatg
ttttatctatgctatgtggtataatgacaacagcaactgtttcgcatgca
tatcaagttaggatgctgtgaagcactgaagatgagacttcttccagtca
attcttttctctcaatgcaagtgcctgtctgacttttatttgatattttt
gttaagtaaaaagtttgatttttgcattgaaaaagaaaatggcagaatga
gtggagaaaatccaatagtgtattttataaaaaaactcagtttatatata
tggatttcattaattataattatattatatatttatattatattattaaa
agcatattaatatatcgtctatgatatgtttatatattgtacaaattaca
tttatataattataatttattaattattaactatacatattcatatatat
atgtatatatggtattctgtctttattttctgttgctctgataaagcacc
cttgatgaaaaaaacataggagtagaaagaatttattcagcttacatttc
acggttcagcctcatactgagatagaagtcaaggcagggactccaaagca
gcttagtcttatcccattccccagtttatggaagagaccaaccttggtat
ttgcctgctgttgccttttattcacctgctatcttcatccatgcaagttc
agattggaatttgccacatattcaggactggtcatttatgtatgacaact
ctgccaatgacattgccggag
gaattcttcattttttgtgatgtctggataaattaaaaggtagatccttt
atgagttgcttttctcagtgttgtgagccttataaaagcaatgcagtgga
gaataggtttcttttggcttgtggtttttggacataggacatcatggcag
ggaaatcactgaggcagctgcttgtctgtgtccccacccagaaagaagaa
aatgatgaaagcttaggatctgctagcttccccttgttttgtagtccagg
acacaatcctgggggatgtcctgtacattggatcctttaccttaattata
ttaatcgaaatactctctcaaacatgtgcccagagataatataatctaaa
taatccctcacaggcatgcatggaggcttgtctcataagtgattccagat
tctgtcaagttgacaattaatattaagtatcaaaagtccaccttttgtca
acttgatatccaaacacatcacttttaatctaaagtattccattcttttt
ttatttatctcacagtttgagtttcaaattagatttggagttggaacttt
aaacagtgtttgaaattgttaaagactatgaggaattttagtttgagtgg
atatattgttctattataataggctcacaatatttccactcagagttcaa
aaggcttcacagtctttaactactcaaacactatttaaaattccaagtcc
aaatctcatcttagatgcaacgcaatctcctaactgtgaattcctatgaa
atgaaattcaactctacacttccaacacaaaatggcacagagtaaacatt
ttctactccaaactagaggaatagaggtatatcaaagaattatcagacca
acccaacagggcaaataacaaaccttgaagcttttttatctgacctatga
tggaatatttgggattttaaaatttttttgaagtagtaaggtttttggtt
catattacaaataactctcatcttcacttctttatacacttttactttgg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_64984885_64986163
seq2: B6Ng01-084F17.b_45_1315

seq1  GAATTCTTTTTTAATAGTCAATCCATAGGGGATTAATGAGAGGTGGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTAATAGTCAATCCATAGGGGATTAATGAGAGGTGGGGGG  50

seq1  TAGACATGACTTAGAAAACAAATATTGGAATGGCCAACTTAGCATATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATGACTTAGAAAACAAATATTGGAATGGCCAACTTAGCATATCAT  100

seq1  TAATTCGTCCAACTTCAAGTGTGTTGAATAAATAAGTTAGAAGACAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCGTCCAACTTCAAGTGTGTTGAATAAATAAGTTAGAAGACAAGAA  150

seq1  TTTATAAAATGGTTGTCAGTAAGTTTTGCCTTGCTGGACATGCACAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAATGGTTGTCAGTAAGTTTTGCCTTGCTGGACATGCACAAATA  200

seq1  GTTTATTCTTCACGCACCCAACAAACTCCTTCCACCCTGTGTTGTGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTTCACGCACCCAACAAACTCCTTCCACCCTGTGTTGTGCCTC  250

seq1  ACAAGGACATCTGCTACGCAGGCCAGGGGACTTGGCAAACAAGTGACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGACATCTGCTACGCAGGCCAGGGGACTTGGCAAACAAGTGACCTA  300

seq1  AACACATCTGATGTCTAAAGAGAAGCAAGGGAGACTTGCTGTCTAATGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATCTGATGTCTAAAGAGAAGCAAGGGAGACTTGCTGTCTAATGGC  350

seq1  ATCTAGGCTAGGTTTATTATATGATTCTGAGATACTACTTTTCCTGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGCTAGGTTTATTATATGATTCTGAGATACTACTTTTCCTGTAGT  400

seq1  GACCCCCTTCACTAGGTCAGCAAAAATGAAATGTGTCTGGCGACTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCCTTCACTAGGTCAGCAAAAATGAAATGTGTCTGGCGACTTTTGT  450

seq1  AAACTTAATGCATTGCTACATTTTGAAAATGTCTGCAAACATAATGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAATGCATTGCTACATTTTGAAAATGTCTGCAAACATAATGCACT  500

seq1  GTGAATATAAGGCAGTGTTCAGTAAACAGTTGAAAATCTTTCATACCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATAAGGCAGTGTTCAGTAAACAGTTGAAAATCTTTCATACCATG  550

seq1  TTTTATCTATGCTATGTGGTATAATGACAACAGCAACTGTTTCGCATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTATGCTATGTGGTATAATGACAACAGCAACTGTTTCGCATGCA  600

seq1  TATCAAGTTAGGATGCTGTGAAGCACTGAAGATGAGACTTCTTCCAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGTTAGGATGCTGTGAAGCACTGAAGATGAGACTTCTTCCAGTCA  650

seq1  ATTCTTTTCTCTCAATGCAAGTGCCTGTCTGACTTTTATTTGATATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTCTCTCAATGCAAGTGCCTGTCTGACTTTTATTTGATATTTTT  700

seq1  GTTAAGTAAAAAGTTTGATTTTTGCATTGAAAAAGAAAATGGCAGAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTAAAAAGTTTGATTTTTGCATTGAAAAAGAAAATGGCAGAATGA  750

seq1  GTGGAGAAAATCCAATAGTGTATTTTATAAAAAAACTCAGTTTATATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAAAATCCAATAGTGTATTTTATAAAAAAACTCAGTTTATATATA  800

seq1  TGGATTTCATTAATTATAATTATATTATATATTTATATTATATTATTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTCATTAATTATAATTATATTATATATTTATATTATATTATTAAA  850

seq1  AGCATATTAATATATCGTCTATGATATGTTTATATATTGTACAAATTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTAATATATCGTCTATGATATGTTTATATATTGTACAAATTACA  900

seq1  TTTATATAATTATAATTTATTAATTATTAACTATACATATTCATATATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAATTATAATTTATTAATTATTAACTATACATATTCATATATAT  950

seq1  ATGTATATATGGTATTCTGTCTTTA-TTTCTGTTGCTCTGATAAAGCACC  999
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGTATATATGGTATTCTGTCTTTATTTTCTGTTGCTCTGATAAAGCACC  1000

seq1  C-TGATGAAAAACAACATAGGAGTAGAAAG-ATTTATTCAGCTTACAATT  1047
      | |||||||||| ||||||||||||||||| ||||||||||||||| |||
seq2  CTTGATGAAAAA-AACATAGGAGTAGAAAGAATTTATTCAGCTTAC-ATT  1048

seq1  ACAGGTTTCAG-CTCATACTGAGATAG-AGTCAAGGCAGGAACT-CAAAG  1094
       || | ||||| ||||||||||||||| |||||||||||| ||| |||||
seq2  TCACGGTTCAGCCTCATACTGAGATAGAAGTCAAGGCAGGGACTCCAAAG  1098

seq1  CAGC-TAGTCATATCACATT-CACAGTTAAGAGAAAAGAGGACCAAATAC  1142
      |||| ||||| |||| |||| | ||||| |  ||| |   |||||   ||
seq2  CAGCTTAGTCTTATCCCATTCCCCAGTTTATGGAAGA---GACCA---AC  1142

seq1  ATTGGTA-TTGCCTGCTTGTTG-CTTTTA-TCACCTGGCTATCTTCATAC  1189
       |||||| |||||||| ||||| |||||| |||||| |||||||||||  
seq2  CTTGGTATTTGCCTGC-TGTTGCCTTTTATTCACCT-GCTATCTTCAT--  1188

seq1  CAATGCAAGTCAAGATTTGGGAAATAGTGCCACACATAGTGGACTGGGTC  1239
      | ||||||||  |||||  |||| |  ||||||| ||   ||||| ||||
seq2  CCATGCAAGTTCAGATT--GGAATT--TGCCACATATTCAGGACT-GGTC  1233

seq1  AATTAATGATTAGGACAA-TCTGCCAATGACATGCCCGGAG  1279
       ||| |||  || ||||| ||||||||||||||  ||||||
seq2  -ATTTATG--TATGACAACTCTGCCAATGACATTGCCGGAG  1271

seq1: chr7_65162836_65163385
seq2: B6Ng01-084F17.g_69_618 (reverse)

seq1  AAAGTTCCAACTCCAAATCTAATTTGAAACTCAAACTGTGAGATAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCCAACTCCAAATCTAATTTGAAACTCAAACTGTGAGATAAATAA  50

seq1  AAAAAGAATGGAATACTTTAGATTAAAAGTGATGTGTTTGGATATCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATGGAATACTTTAGATTAAAAGTGATGTGTTTGGATATCAAGT  100

seq1  TGACAAAAGGTGGACTTTTGATACTTAATATTAATTGTCAACTTGACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAAGGTGGACTTTTGATACTTAATATTAATTGTCAACTTGACAGA  150

seq1  ATCTGGAATCACTTATGAGACAAGCCTCCATGCATGCCTGTGAGGGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAATCACTTATGAGACAAGCCTCCATGCATGCCTGTGAGGGATTA  200

seq1  TTTAGATTATATTATCTCTGGGCACATGTTTGAGAGAGTATTTCGATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATTATATTATCTCTGGGCACATGTTTGAGAGAGTATTTCGATTAA  250

seq1  TATAATTAAGGTAAAGGATCCAATGTACAGGACATCCCCCAGGATTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAAGGTAAAGGATCCAATGTACAGGACATCCCCCAGGATTGTGT  300

seq1  CCTGGACTACAAAACAAGGGGAAGCTAGCAGATCCTAAGCTTTCATCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACTACAAAACAAGGGGAAGCTAGCAGATCCTAAGCTTTCATCATT  350

seq1  TTCTTCTTTCTGGGTGGGGACACAGACAAGCAGCTGCCTCAGTGATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTCTGGGTGGGGACACAGACAAGCAGCTGCCTCAGTGATTTCC  400

seq1  CTGCCATGATGTCCTATGTCCAAAAACCACAAGCCAAAAGAAACCTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATGATGTCCTATGTCCAAAAACCACAAGCCAAAAGAAACCTATTC  450

seq1  TCCACTGCATTGCTTTTATAAGGCTCACAACACTGAGAAAAGCAACTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCATTGCTTTTATAAGGCTCACAACACTGAGAAAAGCAACTCAT  500

seq1  AAAGGATCTACCTTTTAATTTATCCAGACATCACAAAAAATGAAGAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATCTACCTTTTAATTTATCCAGACATCACAAAAAATGAAGAATTC  550