BAC Information

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BAC

Clone NameB6Ng01-084M11
Chromosome7 (Build37)
Map Location 65,959,369 - 66,100,988
singlet/doubletdoublet
Overlap geneAtp10a, LOC621446
Upstream geneGabrb3, EG668807, LOC434189
Downstream geneLOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084M11.bB6Ng01-084M11.g
ACCDH898632DH898633
length1,1801,050
definitionDH898632|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M11, 5' end.DH898633|Mus musculus domesticus DNA, BAC clone: B6Ng01-084M11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,959,369 - 65,960,523)(66,099,935 - 66,100,988)
sequence
gaattctctcttctgcataagcatttattgaaatctctcttctgcatcag
ttaaaaattgttacctctattgtctttatcagtatggagattgcacataa
atttgtagacattctttttctaattctagccgctgatactatcacataca
acctgaacatacatttataaattttgtagtgcatgatgttgaaaatttcc
atcactgagattgggtctttatctatttttatctattgatttttttttcc
acataaaatatctactgtcaagtgtcccatcaggtctgatttagttctct
cacacaaggagcactgccatcaacctggtatagagaagtgtgtgttcctt
tttttttttttttcattctccagcccctttaagccattcagaaagcactt
tcttcttgcatctgatgattgattattccatgttatttttttcacacttt
ccagttcaaaaagcatgctgggtgaacacatttctttatttgcaacaggg
tcttgttatacagcatagaccactgtcattttctcagtgtgaatactgca
cataagttttctttctttgctctttgtcattttaggctgctgtgaatgga
tcactgtccctgcacccctactgatccctcttctggagttttgagctagt
tgttgctggtacttaagaagctagtcctgagaatcagactgttctattta
aaattttaactatgatcatagttctaccaactatactttaaaaaattttg
cctctataatttggtttatttcttaaccctcttctattttaaaatgttta
acatcaatttactgctttttcttggattttcttatagggaggacaaataa
tatgtttttcaaatttaaaatggtctatttttttgtacattttcatttat
attgtaagttaaaactggccatttaggactatctctataggcactgggat
ttgtagcaaggttggtaaaatacttgcctagttgaacaatgtcatggatt
attgccagatccctataaaaggaatgatagatagcacgtgcctgtgaaat
cagcccttgggagtaagagaagaagaatcgatatccaagaaattcgcggg
cccagccgatttcactttcatccagaagataggtgactttgctcaaggac
acattcaaattatattggttcgcctcaaag
gaattcagtgagaaaaagcactagttgtacaagcctggagacatcagtta
aatccccagaacccatataaagatagggggaaagaatgactgtgtaaaat
tgtctttagacgtctgcatgcatgttagggcatgtgtaccccactcctga
tatagcatacacacacagaaactaatgataatactaaaagtaatttttaa
gagaaatatgaatctaggaaggatcaactccagcattgcatccaaccttt
aagcacaggcctcattgcttctttcaagtgacactgaagttggctttgcc
atgtattctgccagaagctgcagggtcctgctctagccctgaagagtaga
atatcagtcttcacaggccggacttcagcagtgagggagcaggccctgtt
agcctcaagagagggcaagcagtcttgggatatctgtggtagttctgaag
ccttttgctctcctgaggtcttctaggctgctcacgcgcagagctgagag
ctaccttagaagctgtagtgggtgcagggtgaagtggtatggaaatgagg
acaaggatagagactgagcagccttgaagagatgtcagaaaggacatttg
gaaaagacaaacaaaaacagaaacaaaaaacaaaaaacccaaacaaaaac
tcaatttgttccttctaagttgataggaaaatagatacagaggcaaatta
gaattatcctagaaatttttctagaaattattctataaaaattggctact
cacacaagggagttggtctctacaggttctatctaccccgtctctgtgca
ttccgctaaagtcatcctgttgggtcctgggagcctcttgtttccctcat
ctcccactgctacatatttttattctatttcctgaccctctgtatctctc
tcccatcccctccagtacttaatactgactcccccgcccttatttcctcc
tatgtaaaccatatttgtagggggttgagaaaacttctctaaggtctaca
tttactcatttctggggctcagcatttacattttacaccctggcaatgct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_65959369_65960523
seq2: B6Ng01-084M11.b_44_1223

seq1  GAATTCTCTCTTCTGCATAAGCATTTATTGAATTCTCTCTTCTGCATCAG  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATTCTCTCTTCTGCATAAGCATTTATTGAAATCTCTCTTCTGCATCAG  50

seq1  TTAAAAATTGTTACCTCTATTGTCTTTATCAGTATGGAGATTGCACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTGTTACCTCTATTGTCTTTATCAGTATGGAGATTGCACATAA  100

seq1  ATTTGTAGACATTCTTTTTCTAATTCTAGCCGCTGATACTATCACATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAGACATTCTTTTTCTAATTCTAGCCGCTGATACTATCACATACA  150

seq1  ACCTGAACATACATTTATAAATTTTGTAGTGCATGATGTTGAAAATTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAACATACATTTATAAATTTTGTAGTGCATGATGTTGAAAATTTCC  200

seq1  ATCACTGAGATTGGGTCTTTATCTATTTTTATCTATTGATTTTTTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGAGATTGGGTCTTTATCTATTTTTATCTATTGATTTTTTTTTCC  250

seq1  ACATAAAATATCTACTGTCAAGTGTCCCATCAGGTCTGATTTAGTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATATCTACTGTCAAGTGTCCCATCAGGTCTGATTTAGTTCTCT  300

seq1  CACACAAGGAGCACTGCCATCAACCTGGTATAGAGAAGTGTGTGTTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGGAGCACTGCCATCAACCTGGTATAGAGAAGTGTGTGTTCCTT  350

seq1  TTTTTTTTTTTTTCATTCTCCAGCCCCTTTAAGCCATTCAGAAAGCACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCATTCTCCAGCCCCTTTAAGCCATTCAGAAAGCACTT  400

seq1  TCTTCTTGCATCTGATGATTGATTATTCCATGTTATTTTTTTCACACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGCATCTGATGATTGATTATTCCATGTTATTTTTTTCACACTTT  450

seq1  CCAGTTCAAAAAGCATGCTGGGTGAACACATTTCTTTATTTGCAACAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCAAAAAGCATGCTGGGTGAACACATTTCTTTATTTGCAACAGGG  500

seq1  TCTTGTTATACAGCATAGACCACTGTCATTTTCTCAGTGTGAATACTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTATACAGCATAGACCACTGTCATTTTCTCAGTGTGAATACTGCA  550

seq1  CATAAGTTTTCTTTCTTTGCTCTTTGTCATTTTAGGCTGCTGTGAATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTTTTCTTTCTTTGCTCTTTGTCATTTTAGGCTGCTGTGAATGGA  600

seq1  TCACTGTCCCTGCACCCCTACTGATCCCTCTTCTGGAGTTTTGAGCTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTCCCTGCACCCCTACTGATCCCTCTTCTGGAGTTTTGAGCTAGT  650

seq1  TGTTGCTGGTACTTAAGAAGCTAGTCCTGAGAATCAGACTGTTCTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGGTACTTAAGAAGCTAGTCCTGAGAATCAGACTGTTCTATTTA  700

seq1  AAATTTTAACTATGATCATAGTTCTACCAACTATACTTTAAAAAATTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAACTATGATCATAGTTCTACCAACTATACTTTAAAAAATTTTG  750

seq1  CCTCTATAATTTGGTTTATTTCTTAACCCTCTTCTATTTTAAAATGTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATAATTTGGTTTATTTCTTAACCCTCTTCTATTTTAAAATGTTTA  800

seq1  ACATCAATTTACTGCTTTTTCTTGGATTTTCTTATAGGGAGGACAAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAATTTACTGCTTTTTCTTGGATTTTCTTATAGGGAGGACAAATAA  850

seq1  TATGTTTTTCAAATTTAAAATGGTCTA-TTTTTTGTACATTTTCAATTTA  899
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  TATGTTTTTCAAATTTAAAATGGTCTATTTTTTTGTACATTTTC-ATTTA  899

seq1  TATTGTAAGGTTAAAACTGGCCATTTAGGACTATCCCTATAGGCACTGGG  949
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  TATTGTAA-GTTAAAACTGGCCATTTAGGACTATCTCTATAGGCACTGGG  948

seq1  A-TTGTAGCCAGGTTGGTAAAATACTTGCCTAGTTTGAACAATGTCATGG  998
      | ||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  ATTTGTAGCAAGGTTGGTAAAATACTTGCCTAG-TTGAACAATGTCATGG  997

seq1  ATTAGTGGCCAGATCCCCATAAAAAGGAATGATAGATAGCACGTGCTTGT  1048
      |||| | |||||||||| || ||||||||||||||||||||||||| |||
seq2  ATTA-TTGCCAGATCCCTAT-AAAAGGAATGATAGATAGCACGTGCCTGT  1045

seq1  GATATCAGCCCTTGGGAAGTAGAGACAGAAGAATCAGTAATTCAGAGATA  1098
      || ||||||||||||||   ||||| |||||||||  ||    ||| || 
seq2  GAAATCAGCCCTTGGGAGTAAGAGA-AGAAGAATCGATATCCAAGAAAT-  1093

seq1  TCGTGGCCCATGCAGATTTCACTTTCATCCTAGGATGTATGTGACTTTGC  1148
      ||| || ||  || |||||||||||||||| || |  || ||||||||| 
seq2  TCGCGGGCCCAGCCGATTTCACTTTCATCC-AGAAGATAGGTGACTTTG-  1141

seq1  CTCAAAG---------------------------------  1155
      ||| |||                                 
seq2  CTC-AAGGACACATTCAAATTATATTGGTTCGCCTCAAAG  1180

seq1: chr7_66099935_66100988
seq2: B6Ng01-084M11.g_70_1119 (reverse)

seq1  AGCATTG-CAGGGTGTAAAAATGTAAATGCTGAGCCCCAGAAATGAAGTA  49
      ||||||| |||||||| |||||||||||||||||||||||||||| ||||
seq2  AGCATTGCCAGGGTGT-AAAATGTAAATGCTGAGCCCCAGAAATG-AGTA  48

seq1  CATGTAGACCTTAGAGAGTTTTTCTCAACCCCCTACAAATTATGGTTTAC  99
       ||||||||||||||||  |||||||||||||||||||| ||||||||||
seq2  AATGTAGACCTTAGAGAAGTTTTCTCAACCCCCTACAAA-TATGGTTTAC  97

seq1  ATAAGGAGGAAATAAGGGCGGGGGAGTCAGTATTAAGTACTGGAGGGGAT  149
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-AGGAGGAAATAAGGGCGGGGGAGTCAGTATTAAGTACTGGAGGGGAT  146

seq1  GGGAGAGAGATACAGAGGGTCAGGAAATAGAATAAAAATATGTAGCAGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAGATACAGAGGGTCAGGAAATAGAATAAAAATATGTAGCAGTG  196

seq1  GGAGATGAGGGAAACAAGAGGCTCCCAGGACCCAACAGGATGACTTTAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGAGGGAAACAAGAGGCTCCCAGGACCCAACAGGATGACTTTAGC  246

seq1  GGAAATGCACAGAGACGGGGTAGATAGAACCTGTAGAGACCAACTCCCTT  299
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GG-AATGCACAGAGACGGGGTAGATAGAACCTGTAGAGACCAACTCCCTT  295

seq1  GTGTGAGTAGCCAATTTTTATAGAATAATTTCTAGAAAAATTTCTAGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGTAGCCAATTTTTATAGAATAATTTCTAGAAAAATTTCTAGGAT  345

seq1  AATTCTAATTTGCCTCTGTATCTATTTTCCTATCAACTTAGAAGGAACAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAATTTGCCTCTGTATCTATTTTCCTATCAACTTAGAAGGAACAA  395

seq1  ATTGAGTTTTTGTTTGGGTTTTTTGTTTTTTGTTTCTGTTTTTGTTTGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTTTTTGTTTGGGTTTTTTGTTTTTTGTTTCTGTTTTTGTTTGTC  445

seq1  TTTTCCAAATGTCCTTTCTGACATCTCTTCAAGGCTGCTCAGTCTCTATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAATGTCCTTTCTGACATCTCTTCAAGGCTGCTCAGTCTCTATC  495

seq1  CTTGTCCTCATTTCCATACCACTTCACCCTGCACCCACTACAGCTTCTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCTCATTTCCATACCACTTCACCCTGCACCCACTACAGCTTCTAA  545

seq1  GGTAGCTCTCAGCTCTGCGCGTGAGCAGCCTAGAAGACCTCAGGAGAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTCTCAGCTCTGCGCGTGAGCAGCCTAGAAGACCTCAGGAGAGCA  595

seq1  AAAGGCTTCAGAACTACCACAGATATCCCAAGACTGCTTGCCCTCTCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTCAGAACTACCACAGATATCCCAAGACTGCTTGCCCTCTCTTG  645

seq1  AGGCTAACAGGGCCTGCTCCCTCACTGCTGAAGTCCGGCCTGTGAAGACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACAGGGCCTGCTCCCTCACTGCTGAAGTCCGGCCTGTGAAGACT  695

seq1  GATATTCTACTCTTCAGGGCTAGAGCAGGACCCTGCAGCTTCTGGCAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTACTCTTCAGGGCTAGAGCAGGACCCTGCAGCTTCTGGCAGAA  745

seq1  TACATGGCAAAGCCAACTTCAGTGTCACTTGAAAGAAGCAATGAGGCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGCAAAGCCAACTTCAGTGTCACTTGAAAGAAGCAATGAGGCCTG  795

seq1  TGCTTAAAGGTTGGATGCAATGCTGGAGTTGATCCTTCCTAGATTCATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAAGGTTGGATGCAATGCTGGAGTTGATCCTTCCTAGATTCATAT  845

seq1  TTCTCTTAAAAATTACTTTTAGTATTATCATTAGTTTCTGTGTGTGTATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTAAAAATTACTTTTAGTATTATCATTAGTTTCTGTGTGTGTATG  895

seq1  CTATATCAGGAGTGGGGTACACATGCCCTAACATGCATGCAGACGTCTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAGGAGTGGGGTACACATGCCCTAACATGCATGCAGACGTCTAA  945

seq1  AGACAATTTTACACAGTCATTCTTTCCCCCTATCTTTATATGGGTTCTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTTTACACAGTCATTCTTTCCCCCTATCTTTATATGGGTTCTGG  995

seq1  GGATTTAACTGATGTCTCCAGGCTTGTACAACTAGTGCTTTTTCTCACTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAACTGATGTCTCCAGGCTTGTACAACTAGTGCTTTTTCTCACTG  1045

seq1  AATTC  1054
      |||||
seq2  AATTC  1050