BAC Information

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BAC

Clone NameB6Ng01-084N08
Chromosome7 (Build37)
Map Location 77,804,846 - 77,805,999
singlet/doubletsinglet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084N08.bB6Ng01-084N08.g
ACCDH898671DH898672
length1,2401,151
definitionDH898671|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N08, 5' end.DH898672|Mus musculus domesticus DNA, BAC clone: B6Ng01-084N08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatgggattatttgaatt
tctggagtccagattcttgagctctttgtatatttggatattagtccgtt
atcagatttaggactggtaaaaatcctttcccaatctgttggtggccttt
ttgtcttattgacaatgtcttttgccttacagaagctttgcaattttatg
aggtccaatttgtcaattcttgatcttacagcacaagtcatagctgttct
ttttatgaatttttcccctgtgcccatatctttgaggcttttccccactt
tctcatttataaatttcagtgtctctggttttatgtggagttctttgatc
cacttagacttgagctttgtacaaggagataagaatggatcaattcgcat
tcttctacatgataaccaccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttcccagtggatggttttagctcccttgtcaaagatcaagtg
accataggtatgtggattcatttctgggtcttcaattctattccaatgat
ctacctgtctgtcacagtaccatgcaattttttatcacaattgctctgta
gtacagcttgaggtcaggcatggtgattccaccaaacgttcttttattgt
tgagaatagtttttgttatcctaggttttttattattccagatgaatttg
caaattgccctttctaactcagtgaagaactgagttggaattttgatggg
gattgcattgaatctgtagattgcttttggcaggatagccattttgacta
tattaatcctgccaatccatgaggatgggagatctttccatcttctgaga
tcttcttcaatttctttcttcagagacttgaagttcttatcatacagatc
tttcacttcttatttagagtcagcagatgctggcaaggatgtggagaaag
aagaacactccattgctcgtaggattgcacacttgtacaacacttcgaaa
gtcagtctggcgttcctcagaaatggacatagtactacaggaagatcagc
atacctctcctgggcatatatcagaagatgttcactggtaataaggacac
atgctccatatggttcaacagcttattaatagcccggagctgggataatc
caatgtccctcacaaggatgatcgatggtactttccacatgtgaatctac
tctcacctatacctgatttgaatcttggctcagtgatatc
gaattctggtctactccaaactggatttcaaaacagaaacagacttaagg
atgaataaactggactataaactagactatgtatctcagaaacagatggg
acatccacaaagcataagaaattattaattttcttaattttctggtatac
aacagtgcctggcatcttgattccaattcaatgctgttattcctctatat
acataagacaaagcatgcaactgtaatatcttagaaagatctgaacatgt
taataaaaatcgacaagttcctttatgggagacagtctaacctaagaggt
ttgggggaggggagtgtcagagctcaatagcccattcagcattgaaatgg
gaacactgaggctactctttggataaattcatgccagatttggcctgcag
ctctcgccaggcagttcccagatgagaacagtccctttgcctgtggtgaa
gaagcgcagaataatgcctctttgaattagtttcaaaatagtgctgcgat
gcagacagacaacttctgaggccaaagtgcatgagcatcgtataatggca
gtctgttagagtactcccagtacctctggaggatatggttatagtataca
ttaaaaccttcaaaagaaaccaggatcaaccagcatcagatgacaagccc
tgcatgacagtagtacaatggagttttatttcttattaaaaataacaata
aagtagctcaatcttaatcatggaagagattttccaagaaccacagtgga
gttaaatttaagaccatgggtagtagtgaactctatgtatgttgattttt
cctagaacagattcaatttattcataaatttgaagagttaataataaatt
acataattaacaatgacaatatattttcaataaatgttatgttgaatgtg
gactcttcaaaaaatatcatatgatacccattcttctctttgttgtgata
atgggatagagtacaatgtgttctggatgacaggaataatgtatggatag
tatttggccttgggttcctatgttagggtcacttcaccaagcattggtgc
tagcttgaatagttcattttgaataccagatggcatttaaaactggaagt
gagggagtatagaccaactgttacgatgacactgggagtgaattattctt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_77804846_77805999
seq2: B6Ng01-084N08.g_70_1220

seq1  GAATTCTGGTCTACTCCAAACTGGATTTCAAAACAGAAACAGACTTAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTCTACTCCAAACTGGATTTCAAAACAGAAACAGACTTAAGG  50

seq1  ATGAATAAACTGGACTATAAACTAGACTATGTATCTCAGAAACAGATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAAACTGGACTATAAACTAGACTATGTATCTCAGAAACAGATGGG  100

seq1  ACATCCACAAAGCATAAGAAATTATTAATTTTCTTAATTTTCTGGTATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCACAAAGCATAAGAAATTATTAATTTTCTTAATTTTCTGGTATAC  150

seq1  AACAGTGCCTGGCATCTTGATTCCAATTCAATGCTGTTATTCCTCTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGCCTGGCATCTTGATTCCAATTCAATGCTGTTATTCCTCTATAT  200

seq1  ACATAAGACAAAGCATGCAACTGTAATATCTTAGAAAGATCTGAACATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGACAAAGCATGCAACTGTAATATCTTAGAAAGATCTGAACATGT  250

seq1  TAATAAAAATCGACAAGTTCCTTTATGGGAGACAGTCTAACCTAAGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAATCGACAAGTTCCTTTATGGGAGACAGTCTAACCTAAGAGGT  300

seq1  TTGGGGGAGGGGAGTGTCAGAGCTCAATAGCCCATTCAGCATTGAAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGAGGGGAGTGTCAGAGCTCAATAGCCCATTCAGCATTGAAATGG  350

seq1  GAACACTGAGGCTACTCTTTGGATAAATTCATGCCAGATTTGGCCTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGAGGCTACTCTTTGGATAAATTCATGCCAGATTTGGCCTGCAG  400

seq1  CTCTCGCCAGGCAGTTCCCAGATGAGAACAGTCCCTTTGCCTGTGGTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGCCAGGCAGTTCCCAGATGAGAACAGTCCCTTTGCCTGTGGTGAA  450

seq1  GAAGCGCAGAATAATGCCTCTTTGAATTAGTTTCAAAATAGTGCTGCGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGCAGAATAATGCCTCTTTGAATTAGTTTCAAAATAGTGCTGCGAT  500

seq1  GCAGACAGACAACTTCTGAGGCCAAAGTGCATGAGCATCGTATAATGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAGACAACTTCTGAGGCCAAAGTGCATGAGCATCGTATAATGGCA  550

seq1  GTCTGTTAGAGTACTCCCAGTACCTCTGGAGGATATGGTTATAGTATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTAGAGTACTCCCAGTACCTCTGGAGGATATGGTTATAGTATACA  600

seq1  TTAAAACCTTCAAAAGAAACCAGGATCAACCAGCATCAGATGACAAGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCTTCAAAAGAAACCAGGATCAACCAGCATCAGATGACAAGCCC  650

seq1  TGCATGACAGTAGTACAATGGAGTTTTATTTCTTAATTAAAAATAACAAT  700
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGCATGACAGTAGTACAATGGAGTTTTATTTCTT-ATTAAAAATAACAAT  699

seq1  AAAGTAGCTCAATCTTAATCATGGAAGAGATTTTCCAAGAACCACAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGCTCAATCTTAATCATGGAAGAGATTTTCCAAGAACCACAGTGG  749

seq1  AGTTAAATTTAAGACCATGGGTAGTAGTGAACTCTATGTATGTTGATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATTTAAGACCATGGGTAGTAGTGAACTCTATGTATGTTGATTTT  799

seq1  TCCTAGAACAGATACAATTTAATTCATAAA-TTGAAGAGTTAATAATAAA  849
      ||||||||||||| |||||| ||||||||| |||||||||||||||||||
seq2  TCCTAGAACAGATTCAATTT-ATTCATAAATTTGAAGAGTTAATAATAAA  848

seq1  TACAATAATTAACAATGACAATATA-TTTCAATAAATGTTATG-TGAATG  897
      |   ||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  TTACATAATTAACAATGACAATATATTTTCAATAAATGTTATGTTGAATG  898

seq1  TGGACTC-TCAAAAAATATCATATGATACCCATTCTTCTCTTTGTTGTGA  946
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCTTCAAAAAATATCATATGATACCCATTCTTCTCTTTGTTGTGA  948

seq1  TAATGGATAAGAGTACAATGTGTTCTGGATGACAGGAATAATGTAGGGAT  996
      ||||||   |||||||||||||||||||||||||||||||||||| ||||
seq2  TAATGGGATAGAGTACAATGTGTTCTGGATGACAGGAATAATGTATGGAT  998

seq1  AGTAATGTGGCCTTGGGTTCCTATGTAAGGGTCACTTCAACACAAGCATT  1046
      ||| || ||||||||||||||||||| ||||||||||||   ||||||||
seq2  AGT-ATTTGGCCTTGGGTTCCTATGTTAGGGTCACTTCA--CCAAGCATT  1045

seq1  -GTGCTAGCATG-ATAGTTCATTTTGATAACCAAGATGGCTATTAAATAC  1094
       |||||||| || ||||||||||||||  ||| ||||||| ||| || ||
seq2  GGTGCTAGCTTGAATAGTTCATTTTGAATACC-AGATGGC-ATTTAAAAC  1093

seq1  TGAATGTGAGGGTAGTATAGACAACATGGACATGATGGACACT-GGAGTG  1143
      || | ||||||| ||||||||| | |  |  | ||| |||||| ||||||
seq2  TGGAAGTGAGGG-AGTATAGACCA-ACTGTTACGAT-GACACTGGGAGTG  1140

seq1  AATTAATCTTA  1154
      ||||| |||||
seq2  AATTATTCTTA  1151