BAC Information

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BAC

Clone NameB6Ng01-085D24
Chromosome7 (Build37)
Map Location 114,519,112 - 114,697,931
singlet/doubletdoublet
Overlap geneSyt9
Upstream geneLOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik
Downstream geneOlfml1, Ppfibp2, 5330417H12Rik, Cyb5r2, Ovch2, LOC100042310, Olfr467, Olfr468-ps1, Olfr469, GA_x5J8B7W6B6J-2580381-2580079, Olfr470, Olfr471, LOC626661, Olfr472, Olfr473, LOC669301, Olfr474, Olfr476, Olfr477, LOC626732, Olfr478, Olfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085D24.bB6Ng01-085D24.g
ACCDH898976DH898977
length1481,064
definitionDH898976|Mus musculus domesticus DNA, BAC clone: B6Ng01-085D24, 5' end.DH898977|Mus musculus domesticus DNA, BAC clone: B6Ng01-085D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,697,784 - 114,697,931)(114,519,112 - 114,520,168)
sequence
gaattcaagggaacataaacatttagttcaggtaccaaactccatttatc
agtaacactgtgaacagagatgagtgagagagaagcctgcaagatgctcc
tgtcacatcttcaaaaacaaaaaaatgtgtgtgtgtgtgggggggggg
gaattctttatccagccttagtttccattcatggtccactgttatgttct
ggaagtatttctgcatattttcaaaaaaaaaaaaaaggcctagaaaatgt
ttagcagctgagttgtgagacagagctttaatgtcactttgtcagtggct
ctcccttgcagctaacttcactatgtcatggaaagcaagctctacttccg
cggtggtcaggtttggctgcatattgaggccaacctgggctgtatgagac
tctgtcccagggtcagagaaacccttaaggattccagcagaaagaagaat
atcagaaacctagcaatgactgggctgtaacctagaccagttaaaccaaa
gtctcaggggtggtggtacctgggattggtgttgccttacatttcctggt
tgaggctgatttacagtcagatagaggaaaacctgttataaccatagacc
acggcagaatccactgaactcagctcagctcatgttcccttactctaaaa
atatttttaaagtgacttaaaaacccagaggaatttgactgctgcctttg
gtatagctactacccatatgagttgattcttaacttacttttgataatat
tttgccaagtttttattttgaggacttttttctttctctctctctctctc
tctctctctctctctctctctttctttctttctttctttttttggttttt
tgagacaaggtttctctgtatagctcaggctgtcctggagctcactctgt
agaccaggctggcctcgaactcagaaatccacctgcctctacctcccagg
ttctggaattaaaggtgtgcgccaccactgccgggccttgagggactttt
tattgagtatcagaagacttgattgtgtccatccacttttaaggtgaaaa
aaaaaaaaacaaccacattaaaagctaaatgtggtgacatacatcgttgt
atttataatcccagcttctagtaaaatgagacacccagaatcaggagtca
aggccagccttagctcttaagtgaatttgaggtcagtccgtggccttatg
agtaccttggtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_114697784_114697931
seq2: B6Ng01-085D24.b_42_189 (reverse)

seq1  CCCCCCCCCCACACACACACACATTTTTTTGTTTTTGAAGATGTGACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACACACACACACATTTTTTTGTTTTTGAAGATGTGACAGG  50

seq1  AGCATCTTGCAGGCTTCTCTCTCACTCATCTCTGTTCACAGTGTTACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTTGCAGGCTTCTCTCTCACTCATCTCTGTTCACAGTGTTACTGA  100

seq1  TAAATGGAGTTTGGTACCTGAACTAAATGTTTATGTTCCCTTGAATTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGAGTTTGGTACCTGAACTAAATGTTTATGTTCCCTTGAATTC  148

seq1: chr7_114519112_114520168
seq2: B6Ng01-085D24.g_68_1131

seq1  GAATTCTTTATCCAGCCTTAGTTTCCATTCATGGTCCACTGTTATGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCCAGCCTTAGTTTCCATTCATGGTCCACTGTTATGTTCT  50

seq1  GGAAGTATTTCTGCATATTTTCAAAAAAAAAAAAAAGGCCTAGAAAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTATTTCTGCATATTTTCAAAAAAAAAAAAAAGGCCTAGAAAATGT  100

seq1  TTAGCAGCTGAGTTGTGAGACAGAGCTTTAATGTCACTTTGTCAGTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCTGAGTTGTGAGACAGAGCTTTAATGTCACTTTGTCAGTGGCT  150

seq1  CTCCCTTGCAGCTAACTTCACTATGTCATGGAAAGCAAGCTCTACTTCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTGCAGCTAACTTCACTATGTCATGGAAAGCAAGCTCTACTTCCG  200

seq1  CGGTGGTCAGGTTTGGCTGCATATTGAGGCCAACCTGGGCTGTATGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGTCAGGTTTGGCTGCATATTGAGGCCAACCTGGGCTGTATGAGAC  250

seq1  TCTGTCCCAGGGTCAGAGAAACCCTTAAGGATTCCAGCAGAAAGAAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCAGGGTCAGAGAAACCCTTAAGGATTCCAGCAGAAAGAAGAAT  300

seq1  ATCAGAAACCTAGCAATGACTGGGCTGTAACCTAGACCAGTTAAACCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAACCTAGCAATGACTGGGCTGTAACCTAGACCAGTTAAACCAAA  350

seq1  GTCTCAGGGGTGGTGGTACCTGGGATTGGTGTTGCCTTACATTTCCTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGGGTGGTGGTACCTGGGATTGGTGTTGCCTTACATTTCCTGGT  400

seq1  TGAGGCTGATTTACAGTCAGATAGAGGAAAACCTGTTATAACCATAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTGATTTACAGTCAGATAGAGGAAAACCTGTTATAACCATAGACC  450

seq1  ACGGCAGAATCCACTGAACTCAGCTCAGCTCATGTTCCCTTACTCTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCAGAATCCACTGAACTCAGCTCAGCTCATGTTCCCTTACTCTAAAA  500

seq1  ATATTTTTAAAGTGACTTAAAAACCCAGAGGAATTTGACTGCTGCCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTAAAGTGACTTAAAAACCCAGAGGAATTTGACTGCTGCCTTTG  550

seq1  GTATAGCTACTACCCATATGAGTTGATTCTTAACTTACTTTTGATAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCTACTACCCATATGAGTTGATTCTTAACTTACTTTTGATAATAT  600

seq1  TTTGCCAAGTTTTTATTTTGAGGACTTTTTTCTTTCTCTCTCTCTCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAGTTTTTATTTTGAGGACTTTTTTCTTTCTCTCTCTCTCTCTC  650

seq1  TCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTTTTTGGTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTTTTTGGTTTTT  700

seq1  TGAGACAAGGTTTCTCTGTATAGCTCAGGCTGTCCTGGAGCTCACTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAAGGTTTCTCTGTATAGCTCAGGCTGTCCTGGAGCTCACTCTGT  750

seq1  AGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTACCTCCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTACCTCCCAGG  800

seq1  TTCTGGAATTAAAGGTGTGCGCCACCACTGCCGGGCCTTGA-GGAC-TTT  848
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  TTCTGGAATTAAAGGTGTGCGCCACCACTGCCGGGCCTTGAGGGACTTTT  850

seq1  TAATGAGTATCAGAAGACTTGATTGTGTCCATCCACTTTTAAGGTTGAAA  898
      || ||||||||||||||||||||||||||||||||||||||||||  |||
seq2  TATTGAGTATCAGAAGACTTGATTGTGTCCATCCACTTTTAAGGTGAAAA  900

seq1  AAAAAAAAACAACCACATTAAAAGCTAAATGTGGTGACATACATCG-TGT  947
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAAAAAAACAACCACATTAAAAGCTAAATGTGGTGACATACATCGTTGT  950

seq1  ATTTATAATCCCAGCTCTTAGTAGATAGAGACA-CCAG-ATCAGGAGTTC  995
      ||||||||||||||||  ||||| |  |||||| |||| |||||||| ||
seq2  ATTTATAATCCCAGCTTCTAGTAAAATGAGACACCCAGAATCAGGAG-TC  999

seq1  AAGGCCAGCCTTAGCTTCTTAGTGAATTTGAGGCCAGTCTG-GGCTTTAT  1044
      ||||||||||||||||  | ||||||||||||| ||||| | ||| ||||
seq2  AAGGCCAGCCTTAGCTCTTAAGTGAATTTGAGGTCAGTCCGTGGCCTTAT  1049

seq1  GAG-ACCTT-GTCTC  1057
      ||| ||||| |||||
seq2  GAGTACCTTGGTCTC  1064