BAC Information

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BAC

Clone NameB6Ng01-085O14
Chromosome7 (Build37)
Map Location 149,733,524 - 149,878,478
singlet/doubletdoublet
Overlap geneNctc1, H19, Igf2, Igf2as, Ins2
Upstream geneAp2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23
Downstream geneEG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085O14.bB6Ng01-085O14.g
ACCDH899454DH899455
length731683
definitionDH899454|Mus musculus domesticus DNA, BAC clone: B6Ng01-085O14, 5' end.DH899455|Mus musculus domesticus DNA, BAC clone: B6Ng01-085O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,877,752 - 149,878,478)(149,733,524 - 149,734,209)
sequence
gaattccttaggtcccaatgagtgatatttaaaattttagatccctctaa
gaatctgggaaggtcttaatcccccatggcaacctggggggggggggtct
taatccccatttattaccttggaaaggccttaggtcccagtaagaatgtg
cagaatgcttcaatccacaatgagaatttggggaatgccttatattgtag
ttacaacctgcaggagacctaaactccagggacaacatgtaggaggtttt
gaaccacggtgagaacatgagggctctgtttcacacacactgtaaacatg
ctcaaggcataacatagcctgtaaaaacttgtggacaaatttaggtagct
tgagacactgagtaattccttagacttcagtgagaacctagtcagggttt
taagaccccctgagaacatggggaatgccttagacaccagtgaccacctg
gaaagaccaatccccaaagatagctggatcaatgccttgggacacattgg
ggactacctgggattgcagcgagttcctttacgccttagtggtaacttgt
agaatctttcaggctttattcagaaactggggtctcaagccttcatttaa
acattgcagatgctctatatactcccgtgataaccaataaattttgaagt
cacagctatactgttggacacagtccttacactgatgactgctttatata
accagttagaacatggtaaatgtgtgaagac
gaattcaaaagaatgtcctgggggtggggcactttggggtattgttgggg
gttagtggggcaaattctcaaactctgtgtctcttactttcctactatag
cccagaaccagggcctcccaggctggctcctaggagtgagagtgagaact
tggcccttgccgttgtggaacactccacccccacccccaccccccccccc
ccgcccctttcacttcagtctaggagttcccaacgacccctaaattgggg
caggaggaagctcagcaaaacgcgaggtccccacccccctttcctttcct
accttcactttaggaagtgtttgggatcacatgggcgaaacagctggacg
ctccctaccccagttctccctgggacctcttcagagtcttgggccttaaa
taattcttaagggaccctgacagcgccaaactgtgtgaaacctgatttgt
gtgactcataaaactctatgcttgctgccatagtgtgggagggctgagac
cggcaggtacatgcgtcctttccctccaatgtgtgtgtctgtgtgtcctc
acgtgacagatggattccggggcaaaaacgggagtcactccagcatggaa
aacccttcagggatcgtcccagattaatcacccccttagagacagctgga
gcttctcccgccccatgagtcccccaaggctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149877752_149878478
seq2: B6Ng01-085O14.b_44_774 (reverse)

seq1  GTCTTCACAAATTTCCCATGTTCTTACAGGTTCTATAAAGCCTTCATCAG  50
      ||||||||| |||| ||||||||| || |||| ||||||||  |||||||
seq2  GTCTTCACACATTTACCATGTTCTAACTGGTTATATAAAGCAGTCATCAG  50

seq1  T-TTATGACTGTGTCCAAAGGTCTCACTGTGGCCTC-AAATCTATTGGTT  98
      | | | ||||||||||||  || |  ||||| | || |||| ||||||||
seq2  TGTAAGGACTGTGTCCAACAGTATAGCTGTGACTTCAAAATTTATTGGTT  100

seq1  CTCACTGGAGTTTA-AGCGCATCTCCAATGTCTAACTG-AGGCTTGAGAC  146
       |||| ||||| || || |||||| |||||| ||| || |||||||||||
seq2  ATCACGGGAGTATATAGAGCATCTGCAATGTTTAAATGAAGGCTTGAGAC  150

seq1  CCCAGTTTCTTACTAAAGCCTAAAATATTCTCCAAGTTACCACTCTTGCT  196
      |||||||||| | |||||||| ||| ||||| ||||||||||||   || 
seq2  CCCAGTTTCTGAATAAAGCCTGAAAGATTCTACAAGTTACCACTAAGGCG  200

seq1  TAAAGGAACTCACTGCAATCTAAGGTCTTCCCCAATGTGTCCCAAGGCAT  246
      ||||||||||| ||||||||  ||||  ||||||||||||||||||||||
seq2  TAAAGGAACTCGCTGCAATCCCAGGTAGTCCCCAATGTGTCCCAAGGCAT  250

seq1  TGTTCCAGCTATCTCTGGGGCCTGGTCTTTCCAGGTTGGCCCTGGTGTCT  296
      || ||||||||||| |||||  |||||||||||||| | | |||||||||
seq2  TGATCCAGCTATCTTTGGGGATTGGTCTTTCCAGGTGGTCACTGGTGTCT  300

seq1  AAGACATTCCCCATGTTCTCAGGGGGTCTTAAAACCCTGACTAGGTTCTC  346
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTCCCCATGTTCTCAGGGGGTCTTAAAACCCTGACTAGGTTCTC  350

seq1  ACTGAAGTCTAAGGAATTACTCAGTGTCTCAAGCTACCTAAATTTGTCCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGTCTAAGGAATTACTCAGTGTCTCAAGCTACCTAAATTTGTCCA  400

seq1  CAAGTTTTTACAGGCTATGTTATGCCTTGAGCATGTTTACAGTGTGTGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTTACAGGCTATGTTATGCCTTGAGCATGTTTACAGTGTGTGTG  450

seq1  AAACAGAGCCCTCATGTTCTCACCGTGGTTCAAAACCTCCTACATGTTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGCCCTCATGTTCTCACCGTGGTTCAAAACCTCCTACATGTTGT  500

seq1  CCCTGGAGTTTAGGTCTCCTGCAGGTTGTAACTACAATCTAAGGCATTCC  546
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCTGGAGTTTAGGTCTCCTGCAGGTTGTAACTACAATATAAGGCATTCC  550

seq1  CCAAATTCTCATTGTGGATTGAAGCATTCTGCACATTCTTACTGGGACCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTCTCATTGTGGATTGAAGCATTCTGCACATTCTTACTGGGACCT  600

seq1  AAGGCCTTTCCAAGGTAATAACTGGGGATTAAGACCCCCCCCCCCCAGGT  646
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGGCCTTTCCAAGGTAATAAATGGGGATTAAGACCCCCCCCCCCCAGGT  650

seq1  TGCCATGGGGGATTAAGACCTTCCCAGATTCTTAGAGGGATCTAAAATTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGGGGGATTAAGACCTTCCCAGATTCTTAGAGGGATCTAAAATTT  700

seq1  TCTATATCACTCATTGGGACCTAAGGAATTC  727
      |  ||||||||||||||||||||||||||||
seq2  TAAATATCACTCATTGGGACCTAAGGAATTC  731

seq1: chr7_149733524_149734209
seq2: B6Ng01-085O14.g_72_754

seq1  GAATTCAAAAGAATGTCCTGGGGGTGGGGCACTTTGGGGTATTGTTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAATGTCCTGGGGGTGGGGCACTTTGGGGTATTGTTGGGG  50

seq1  GTTAGTGGGGCAAATTCTCAAACTCTGTGTCTCTTACTTTCCTACTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGGGGCAAATTCTCAAACTCTGTGTCTCTTACTTTCCTACTATAG  100

seq1  CCCAGAACCAGGGCCTCCCAGGCTGGCTCCTAGGAGTGAGAGTGAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAACCAGGGCCTCCCAGGCTGGCTCCTAGGAGTGAGAGTGAGAACT  150

seq1  TGGCCCTTGCCGTTGTGGAACACTCCACCCCCACCCCCACCCCCCCCCCC  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGGCCCTTGCCGTTGTGGAACACTCCACCCCCACCCCCA-CCCCCCCCCC  199

seq1  CCCGCCCCTTTCACTTCAGTCTAGGAGTTCCCAACAACCTCTAGATTGGG  250
      ||||||||||||||||||||||||||||||||||| ||| ||| ||||||
seq2  CCCGCCCCTTTCACTTCAGTCTAGGAGTTCCCAACGACCCCTAAATTGGG  249

seq1  GCAGGAGGAAGCTCAGCAAAACACGGTGTCCCCACCCCCCTTTCCTTTCC  300
      |||||||||||||||||||||| ||  |||||||||||||||||||||||
seq2  GCAGGAGGAAGCTCAGCAAAACGCGAGGTCCCCACCCCCCTTTCCTTTCC  299

seq1  TACCTTCACTTTATGAAGTGTTTGGGATTCCATGGGCCAAACAGCTGGAC  350
      ||||||||||||| ||||||||||||||  ||||||| ||||||||||||
seq2  TACCTTCACTTTAGGAAGTGTTTGGGATCACATGGGCGAAACAGCTGGAC  349

seq1  GCTCCCTACCCCAGTTCTCCCTGGGACCTCAGCAGAGTCTAGGGCCTTAA  400
      ||||||||||||||||||||||||||||||  |||||||| |||||||||
seq2  GCTCCCTACCCCAGTTCTCCCTGGGACCTCTTCAGAGTCTTGGGCCTTAA  399

seq1  ATAATTCTTATAAAGACCATGTCAGCCCCAAACTGTGTGATACCTGATTT  450
      |||||||||| |  |||| || |||| ||||||||||||| |||||||||
seq2  ATAATTCTTA-AGGGACCCTGACAGCGCCAAACTGTGTGAAACCTGATTT  448

seq1  GTAGCACTCATAAAACTCCAAGCCTGCTGCCAGAGTGGGGGAGGGCTGAG  500
      ||   ||||||||||||| | || |||||||| |||| ||||||||||||
seq2  GTGTGACTCATAAAACTCTATGCTTGCTGCCATAGTGTGGGAGGGCTGAG  498

seq1  ACCAGCACATAGAGGCCTCATTTCCCACCAGTGTGTGTGTAAGTGTGTTC  550
      ||| |||  || | || || |||||| ||| |||||||||  |||||| |
seq2  ACCGGCAGGTACATGCGTCCTTTCCCTCCAATGTGTGTGTCTGTGTGTCC  548

seq1  ACAAGTGACTGAGGGATGCCTGGGGGAAAAGGGGAGTCACTCCAAGCA-G  599
       || ||||| || |||| || |||  |||| |||||||||||| |||| |
seq2  TCACGTGACAGATGGATTCCGGGGCAAAAACGGGAGTCACTCC-AGCATG  597

seq1  GGAGACCCTTCAGCTCAGGTCTCCATGTTTACCACCCCCATCAGGGACAG  649
      | | |||||||||     ||| |||  || | ||||||| | || |||||
seq2  GAAAACCCTTCAGGGATCGTC-CCAGATTAATCACCCCC-TTAGAGACAG  645

seq1  CTGGTCCTACTCAGGCCCCATGAGT-CCCCAAGGCTTA  686
      ||||  || |||  ||||||||||| ||||||||||||
seq2  CTGGAGCTTCTCCCGCCCCATGAGTCCCCCAAGGCTTA  683