BAC Information

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BAC

Clone NameB6Ng01-086A12
Chromosome7 (Build37)
Map Location 113,745,624 - 113,871,118
singlet/doubletdoublet
Overlap geneGm1966, LOC100042141, Olfr693, Olfr694, Olfr695
Upstream geneHpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139
Downstream geneOlfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2, 5330417H12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086A12.bB6Ng01-086A12.g
ACCDH899538DH899539
length1,2271,195
definitionDH899538|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A12, 5' end.DH899539|Mus musculus domesticus DNA, BAC clone: B6Ng01-086A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,745,624 - 113,746,857)(113,869,913 - 113,871,118)
sequence
gaattcagaaaatgaggtaattttgactagttcttcctctgactctgact
gattgatccactgtatgatggattgtgcctgaggaaagtttgtcactttg
tagacatgaggttctagaaggctgcacaactgagatttaataaagtgagt
tttataagtgggtgaatttttgcagaagttgacaatgtttattagaaaat
tttgcagatcccaatctatgaggcatgtgttaatccaaatgtcataactt
tttattttttgactcaatgtttgcataaaatctactaacttcctaagctg
ttcttcaggatcagaaacctcccagcctttcacattctctaggaaaagct
tagcttcttttctagcagtcagaaattcttccccttcttgaatctgggca
gctagttcagtcagagcagtgtagtggtctttgaggcagttagccagttg
aagagcattcttaaattcagttctgtgactggacaggataatgtcccaaa
taggtaccaactgcagttccctatcaataacagaccaggtttgattgcta
gctacaaggccagctgtccactgggcaattccatctgcttctgctggtcc
acctatcttggctacagatagttgcaccttggtttgcgagtttagatgag
ttttactgtaaaatgctgtttttgattttgaatttgttatatttacactc
gcaccaactttaactccaaagccactataactgcccataatgtaaatatt
caaagactcttctgcttgctgctttacatcagccaagtgctcacttttga
aaccttctgaaatggctttccagcagtagattccccccaggtgcacaggg
ccttggttagcatgagagccaaacctgtggaaaaagtttttagccctgtg
cctcagtaaagggtagtccatctcggtggtgtgtagtctgctccaggatt
tcttcaatactttttagttcctggagagcagcctggagagttcaagatca
ttgatgtgaaatggcagtggccaatgggatgtagctgaacctggctgagc
aaaaataagtttgctttgaatgggactggtagtatcttcagattctgtct
gttttgttgtgacccatacagcttctagactaagttcccaaccttcttct
tttaacctaagggggtggaactgaacccaccctctcctatagtctgttaa
cttgctggttcttgaagatgaaattcc
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtctaccttcttgagttctttatatatatatcttgatcacgtc
ttcctctccttccactcttcccaataccttcccttcacctcacttccctg
ctatattcaaatcctacctttcttctcagaaatggctcacaataagagaa
gactcccatagatatcaacccaccttggtatattgtcccgtccagcagga
cttagttattccgtgggtcgagaaggaccagggcctgaaagcgaaatgag
cggagaaagggaagcaagaccaagcaaagagttgtcaaggtctgtttaat
gaggcaaagagccaggttataagcacataatgagagaaaattcgggaggg
gttgagggggtataataaaacacagtgaaagggatggacatctggggcgg
atgctgattacaggcttctttcaacttatcttggaacgttggccctaaaa
ctgtaccaagcggccttcaaacattctgcagtttatcttggagtgccagc
cctgacctcacagtcccaggaagccatcaaacatcttgtagctatcttgg
agtgccataaacagtcccaggcaccaaacggagacatggaggagaaggtg
aagctgccttaatctaagcagttctaggtgccaagtgaaggagggagtga
agctagcagtcccaggcgccaggtggaggcaatgaaggagagggtgacat
aattcccttcaaagggtcagccggatctttagagtgagagtaactgtggg
acctagtttcccatggtttggtctctcacagtatatcttgttgcagtagg
aataggtacatattcttccattgtggctaggcaaggtagccctttaaggg
aaagggatccaaaggcaggtaacagagtcatatacagtcactgcttctgc
tgttaggagtctcagcatgtggtatctttttttttatagatattttcttc
attatcatttcaaatgctattcctcaaggccctataacctcccctgccct
gcttcccaaaccacccagttccactttctggcctggcatttcctgtactg
gggcatatgatcttcacaataccaaggatttcttctccattgatgcacta
ggcatactctctgctcatatgcaatagagaacctgccgggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113745624_113746857
seq2: B6Ng01-086A12.b_47_1273

seq1  GAATTCAGAAAATGAGGTAATTTTGACTAGTTCTTCCTCTGACTCTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAATGAGGTAATTTTGACTAGTTCTTCCTCTGACTCTGACT  50

seq1  GATTGATCCACTGTATGATGGATTGTGCCTGAGGAAAGTTTGTCACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATCCACTGTATGATGGATTGTGCCTGAGGAAAGTTTGTCACTTTG  100

seq1  TAGACATGAGGTTCTAGAAGGCTGCACAACTGAGATTTAATAAAGTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATGAGGTTCTAGAAGGCTGCACAACTGAGATTTAATAAAGTGAGT  150

seq1  TTTATAAGTGGGTGAATTTTTGCAGAAGTTGACAATGTTTATTAGAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGTGGGTGAATTTTTGCAGAAGTTGACAATGTTTATTAGAAAAT  200

seq1  TTTGCAGATCCCAATCTATGAGGCATGTGTTAATCCAAATGTCATAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGATCCCAATCTATGAGGCATGTGTTAATCCAAATGTCATAACTT  250

seq1  TTTATTTTTTGACTCAATGTTTGCATAAAATCTACTAACTTCCTAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTGACTCAATGTTTGCATAAAATCTACTAACTTCCTAAGCTG  300

seq1  TTCTTCAGGATCAGAAACCTCCCAGCCTTTCACATTCTCTAGGAAAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGGATCAGAAACCTCCCAGCCTTTCACATTCTCTAGGAAAAGCT  350

seq1  TAGCTTCTTTTCTAGCAGTCAGAAATTCTTCCCCTTCTTGAATCTGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTTTTCTAGCAGTCAGAAATTCTTCCCCTTCTTGAATCTGGGCA  400

seq1  GCTAGTTCAGTCAGAGCAGTGTAGTGGTCTTTGAGGCAGTTAGCCAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTTCAGTCAGAGCAGTGTAGTGGTCTTTGAGGCAGTTAGCCAGTTG  450

seq1  AAGAGCATTCTTAAATTCAGTTCTGTGACTGGACAGGATAATGTCCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATTCTTAAATTCAGTTCTGTGACTGGACAGGATAATGTCCCAAA  500

seq1  TAGGTACCAACTGCAGTTCCCTATCAATAACAGACCAGGTTTGATTGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACCAACTGCAGTTCCCTATCAATAACAGACCAGGTTTGATTGCTA  550

seq1  GCTACAAGGCCAGCTGTCCACTGGGCAATTCCATCTGCTTCTGCTGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAGGCCAGCTGTCCACTGGGCAATTCCATCTGCTTCTGCTGGTCC  600

seq1  ACCTATCTTGGCTACAGATAGTTGCACCTTGGTTTGCGAGTTTAGATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCTTGGCTACAGATAGTTGCACCTTGGTTTGCGAGTTTAGATGAG  650

seq1  TTTTACTGTAAAATGCTGTTTTTGATTTTGAATTTGTTATATTTACACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTGTAAAATGCTGTTTTTGATTTTGAATTTGTTATATTTACACTC  700

seq1  GCACCAACTTTAACTCCAAAGCCACTATAACTGCCCATAATGTAAATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAACTTTAACTCCAAAGCCACTATAACTGCCCATAATGTAAATATT  750

seq1  CAAAGACTCTTCTGCTTGCTGCTTTACATCAGCCAAGTGCTCACTTTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACTCTTCTGCTTGCTGCTTTACATCAGCCAAGTGCTCACTTTTGA  800

seq1  AACCTTCTGAAATGGCTTTCCAGCAGTAGATTCCCCCCAGGTGCACAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTCTGAAATGGCTTTCCAGCAGTAGATTCCCCCCAGGTGCACAGGG  850

seq1  CCTTGGTTAGCATGAGAGCCAAACCTGTGGAAAAAGTTTTTAGCCCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTAGCATGAGAGCCAAACCTGTGGAAAAAGTTTTTAGCCCTGTG  900

seq1  CCTCAGT-AAGGGTAGTCCATCTCGGTGGTGTGTAGTCTGCTCCAGGATT  949
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTAAAGGGTAGTCCATCTCGGTGGTGTGTAGTCTGCTCCAGGATT  950

seq1  TCTTCAATACTTTTTAGTTCCTGGAGAGCAGCCTGGGAGAGTTCAAGATC  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTTCAATACTTTTTAGTTCCTGGAGAGCAGCCT-GGAGAGTTCAAGATC  999

seq1  ATTGATGTGAAAATGGCAGGTGGCCAATGGGATGTAGCTGAACCTGGCTG  1049
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  ATTGATGTG-AAATGGCA-GTGGCCAATGGGATGTAGCTGAACCTGGCTG  1047

seq1  AGCAAAAATAAGTTTGCTTTGAATGGGACTGGTAGTTATCTTCAGATTCT  1099
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGCAAAAATAAGTTTGCTTTGAATGGGACTGGTAG-TATCTTCAGATTCT  1096

seq1  GTCTG-TTTGTTGTGACCCATACCAGCTTCTAGACTAAGTCCCCAACCTT  1148
      ||||| |||||||||||||||| ||||||||||||||||| |||||||||
seq2  GTCTGTTTTGTTGTGACCCATA-CAGCTTCTAGACTAAGTTCCCAACCTT  1145

seq1  CTCCTTT--AACTAAGGGGGTTGAACTGAAACCCACCCTCT-CTATAGTC  1195
      || ||||  | |||||||||| |||||| |||||||||||| ||||||||
seq2  CTTCTTTTAACCTAAGGGGGTGGAACTG-AACCCACCCTCTCCTATAGTC  1194

seq1  TGTGTAAACATGGCTTGTTCTTGAAAAGATGAAAATTCC  1234
      ||| |||   | ||| |||||||  |||||| |||||||
seq2  TGT-TAA--CTTGCTGGTTCTTG--AAGATG-AAATTCC  1227

seq1: chr7_113869913_113871118
seq2: B6Ng01-086A12.g_68_1262 (reverse)

seq1  CCCCACCCCCGCCAGTGTCTCTAGTTGCATATGTAGC--AGAGTATGGCC  48
      |||||  |||| |||  |||||| ||||||||| |||  ||||||| |||
seq2  CCCCA--CCCGGCAGGTTCTCTA-TTGCATATG-AGCAGAGAGTAT-GCC  45

seq1  TAGTTGGCCATCAATGGGAGGAGAAATCCTTGGTATTGTGAAGATCATAT  98
      ||||    ||||||| |||| |||||||||||||||||||||||||||||
seq2  TAGT---GCATCAAT-GGAGAAGAAATCCTTGGTATTGTGAAGATCATAT  91

seq1  GCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGTGGGACTGGGTGGTTTG  148
      ||||||||||| || ||||||| |||||| |||||| |||||||||||||
seq2  GCCCCAGTACA-GGAAATGCCA-GGCCAGAAAGTGGAACTGGGTGGTTTG  139

seq1  GGGAGCAGGGCAGGGGGAGGTTATAGGGGCCTTTGAGG-ATAGCATTTGA  197
      || ||||||||| |||||||||||||||  | |||||| |||||||||||
seq2  GGAAGCAGGGCA-GGGGAGGTTATAGGG--CCTTGAGGAATAGCATTTGA  186

seq1  AATGATAATGAAGAAAATATCTAATAAAAAAAAGATACCACATGCTGAGA  247
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  AATGATAATGAAGAAAATATCTATAAAAAAAAAGATACCACATGCTGAGA  236

seq1  CTCCTAACAGCAGAAGCAGTGACTGTATATGACTCTGTTACCTGCCTTTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAACAGCAGAAGCAGTGACTGTATATGACTCTGTTACCTGCCTTTG  286

seq1  GATCCCTTTCCCTTAAAGGGCTACCTTGCCTAGCCACAATGGAAGAATAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTTTCCCTTAAAGGGCTACCTTGCCTAGCCACAATGGAAGAATAT  336

seq1  GTACCTATTCCTACTGCAACAAGATATACTGTGAGAGACCAAACCATGGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTATTCCTACTGCAACAAGATATACTGTGAGAGACCAAACCATGGG  386

seq1  AAACTAGGTCCCACAGTTACTCTCACTCTAAAGATCCGGCTGACCCTTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGGTCCCACAGTTACTCTCACTCTAAAGATCCGGCTGACCCTTTG  436

seq1  AAGGGAATTATGTCACCCTCTCCTTCATTGCCTCCACCTGGCGCCTGGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATTATGTCACCCTCTCCTTCATTGCCTCCACCTGGCGCCTGGGA  486

seq1  CTGCTAGCTTCACTCCCTCCTTCACTTGGCACCTAGAACTGCTTAGATTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGCTTCACTCCCTCCTTCACTTGGCACCTAGAACTGCTTAGATTA  536

seq1  AGGCAGCTTCACCTTCTCCTCCATGTCTCCGTTTGGTGCCTGGGACTGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTTCACCTTCTCCTCCATGTCTCCGTTTGGTGCCTGGGACTGTT  586

seq1  TATGGCACTCCAAGATAGCTACAAGATGTTTGATGGCTTCCTGGGACTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCACTCCAAGATAGCTACAAGATGTTTGATGGCTTCCTGGGACTGT  636

seq1  GAGGTCAGGGCTGGCACTCCAAGATAAACTGCAGAATGTTTGAAGGCCGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGGGCTGGCACTCCAAGATAAACTGCAGAATGTTTGAAGGCCGC  686

seq1  TTGGTACAGTTTTAGGGCCAACGTTCCAAGATAAGTTGAAAGAAGCCTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACAGTTTTAGGGCCAACGTTCCAAGATAAGTTGAAAGAAGCCTGT  736

seq1  AATCAGCATCCGCCCCAGATGTCCATCCCTTTCACTGTGTTTTATTATAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCATCCGCCCCAGATGTCCATCCCTTTCACTGTGTTTTATTATAC  786

seq1  CCCCTCAACCCCTCCCGAATTTTCTCTCATTATGTGCTTATAACCTGGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCAACCCCTCCCGAATTTTCTCTCATTATGTGCTTATAACCTGGCT  836

seq1  CTTTGCCTCATTAAACAGACCTTGACAACTCTTTGCTTGGTCTTGCTTCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTCATTAAACAGACCTTGACAACTCTTTGCTTGGTCTTGCTTCC  886

seq1  CTTTCTCCGCTCATTTCGCTTTCAGGCCCTGGTCCTTCTCGACCCACGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCGCTCATTTCGCTTTCAGGCCCTGGTCCTTCTCGACCCACGGA  936

seq1  ATAACTAAGTCCTGCTGGACGGGACAATATACCAAGGTGGGTTGATATCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAAGTCCTGCTGGACGGGACAATATACCAAGGTGGGTTGATATCT  986

seq1  ATGGGAGTCTTCTCTTATTGTGAGCCATTTCTGAGAAGAAAGGTAGGATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGTCTTCTCTTATTGTGAGCCATTTCTGAGAAGAAAGGTAGGATT  1036

seq1  TGAATATAGCAGGGAAGTGAGGTGAAGGGAAGGTATTGGGAAGAGTGGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATAGCAGGGAAGTGAGGTGAAGGGAAGGTATTGGGAAGAGTGGAA  1086

seq1  GGAGAGGAAGACGTGATCAAGATATATATATAAAGAACTCAAGAAGGTAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAAGACGTGATCAAGATATATATATAAAGAACTCAAGAAGGTAG  1136

seq1  ACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAAC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTAAAC  1186

seq1  AAAGAATTC  1206
      |||||||||
seq2  AAAGAATTC  1195