BAC Information

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BAC

Clone NameB6Ng01-087N23
Chromosome7 (Build37)
Map Location 103,475,577 - 103,610,374
singlet/doubletdoublet
Overlap geneOdz4, LOC670727, LOC666858
Upstream geneLOC666823, Frda-ps, EG666836
Downstream geneNars2, Gab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087N23.bB6Ng01-087N23.g
ACCDH900878DH900879
length1,199628
definitionDH900878|Mus musculus domesticus DNA, BAC clone: B6Ng01-087N23, 5' end.DH900879|Mus musculus domesticus DNA, BAC clone: B6Ng01-087N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,475,577 - 103,476,769)(103,609,747 - 103,610,374)
sequence
gaattcatgtcttgctacagagggtagtttcaccttgtaagcatggagtt
gtgagagaagtgacatcgagctccaatggtctcctaggacatactgagct
acaactgaagtctgactgctgagagaaataagctaattcataactcaagt
ttggtgactatcccatccttttctttcttatctacatgtgatcatagagt
gttgggaatagttttacatccattttctctgtttaaatactctctgtttt
tggaaattaggcagagttaaagaatcaaacagcagaagcactgaaaggtg
tacagtacaggaacctgtaaggtataaggacagagcaaaggagtgggaac
aaggccaaaaacatacttggtgggacccaatgcaaagtgcttacacagaa
gccctcattcaaacatttgggcattaaaaacatcaacaataaggtattag
gctgagcctaggctagcccaaacttcatctatgcactcagaacagacaca
tagaggaacccagccctgagggaagaagatacttcccagtcaggcagcac
tgggaaaatctgagaggaaggactttgtctcccaaagcatcatagggcta
tctgggcagagaatcagcaggtgctaagatctaaggatgtgggagaggag
tcatgagacaagcttagcctgagatggtttgaagaaggaaagatgaagtg
aaactgacctgccaagaaccagtaacctatgggtttttgtttttgttttt
tatcaattcccccacaagaaagaacatgtgcccctaaccgcacatggact
tcaggcccatggagtcccatttgagacacaacccagaatatccttaattg
ccagctcatctgccctttgcccttactcccattgcctgatcttcccacag
cacataaggggaaggccaaactgtagctcacgtgaagtctgcacaaccac
ctcctagctacgatggagatagtccgaggcacggggaactcaaacctcac
aggcctttgagcctccgagaagaacagctttgtgggtttctttctgactc
ttcatatgttacaaaattgtccatctaatcatttcctgtttgtgagaaag
ttgtcacagagcttgggaacaagttgtttgacttgaacagattggcaatt
ccctcctcggcctatggctgtcttggggttcctgtgtgttggcctgaaa
gaattccactaacacattcctaggaatctaagaatctaaaaagaccgtct
ccttaggaaaacagaatgatgagttattaaacttcaagggttaatggatg
ttgctttgaaaatcactgcaaagacaacagtgagccctgatccccaactg
ataaaacctagacaacactgccagtgtaaaaaaacctgttgggccttaat
aaatatttgtgaaatggattttgctttgatctgaatgaaaaccaaagcta
atattgactggactccacagttggcatgaataatatcagagaggcctggc
aagggtagtgctagaagctgtttaagttctatgggtttttgtaggggcaa
aacatatgttgggccaccctcatggtcccatttctgggctcaaactacag
agcactgtggaacttcggagccagtggtaggcagaatgagattactgatg
gcaatgatcaccttctgtattattggtgacctccagcagaatgaagacag
caatctatagaaatggcactctctctgggcaaccttttggaaccttctgt
ccaagcacttgctcttctccctgttccttctatttaatttgggaggaaaa
tatatatatatatgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103475577_103476769
seq2: B6Ng01-087N23.b_49_1247

seq1  GAATTCATGTCTTGCTACAGAGGGTAGTTTCACCTTGTAAGCATGGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCTTGCTACAGAGGGTAGTTTCACCTTGTAAGCATGGAGTT  50

seq1  GTGAGAGAAGTGACATCGAGCTCCAATGGTCTCCTAGGACATACTGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGAAGTGACATCGAGCTCCAATGGTCTCCTAGGACATACTGAGCT  100

seq1  ACAACTGAAGTCTGACTGCTGAGAGAAATAAGCTAATTCATAACTCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGAAGTCTGACTGCTGAGAGAAATAAGCTAATTCATAACTCAAGT  150

seq1  TTGGTGACTATCCCATCCTTTTCTTTCTTATCTACATGTGATCATAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGACTATCCCATCCTTTTCTTTCTTATCTACATGTGATCATAGAGT  200

seq1  GTTGGGAATAGTTTTACATCCATTTTCTCTGTTTAAATACTCTCTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGAATAGTTTTACATCCATTTTCTCTGTTTAAATACTCTCTGTTTT  250

seq1  TGGAAATTAGGCAGAGTTAAAGAATCAAACAGCAGAAGCACTGAAAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTAGGCAGAGTTAAAGAATCAAACAGCAGAAGCACTGAAAGGTG  300

seq1  TACAGTACAGGAACCTGTAAGGTATAAGGACAGAGCAAAGGAGTGGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTACAGGAACCTGTAAGGTATAAGGACAGAGCAAAGGAGTGGGAAC  350

seq1  AAGGCCAAAAACATACTTGGTGGGACCCAATGCAAAGTGCTTACACAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAAAAACATACTTGGTGGGACCCAATGCAAAGTGCTTACACAGAA  400

seq1  GCCCTCATTCAAACATTTGGGCATTAAAAACATCAACAATAAGGTATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCATTCAAACATTTGGGCATTAAAAACATCAACAATAAGGTATTAG  450

seq1  GCTGAGCCTAGGCTAGCCCAAACTTCATCTATGCACTCAGAACAGACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCCTAGGCTAGCCCAAACTTCATCTATGCACTCAGAACAGACACA  500

seq1  TAGAGGAACCCAGCCCTGAGGGAAGAAGATACTTCCCAGTCAGGCAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAACCCAGCCCTGAGGGAAGAAGATACTTCCCAGTCAGGCAGCAC  550

seq1  TGGGAAAATCTGAGAGGAAGGACTTTGTCTCCCAAAGCATCATAGGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAATCTGAGAGGAAGGACTTTGTCTCCCAAAGCATCATAGGGCTA  600

seq1  TCTGGGCAGAGAATCAGCAGGTGCTAAGATCTAAGGATGTGGGAGAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCAGAGAATCAGCAGGTGCTAAGATCTAAGGATGTGGGAGAGGAG  650

seq1  TCATGAGACAAGCTTAGCCTGAGATGGTTTGAAGAAGGAAAGATGAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGACAAGCTTAGCCTGAGATGGTTTGAAGAAGGAAAGATGAAGTG  700

seq1  AAACTGACCTGCCAAGAACCAGTAACCTATGGGTTTTTGTTTTTGTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACCTGCCAAGAACCAGTAACCTATGGGTTTTTGTTTTTGTTTTT  750

seq1  TATCAATTCCCCCACAAGAAAGAACATGTGCCCCTAACCGCACATGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTCCCCCACAAGAAAGAACATGTGCCCCTAACCGCACATGGACT  800

seq1  TCAGGCCCATGGAGTCCCATTTGAGACACAACCCAGAATATCCTTAATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCCATGGAGTCCCATTTGAGACACAACCCAGAATATCCTTAATTG  850

seq1  CCAGCTCATCTGCCCTTTGCCCTTACTCCCATTGCCTGATCTTCCCACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCATCTGCCCTTTGCCCTTACTCCCATTGCCTGATCTTCCCACAG  900

seq1  CACATAGGGGGAAGGCCAAACTGTAGCTCACGTGAAGTCTGCACAACCAC  950
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGGGGAAGGCCAAACTGTAGCTCACGTGAAGTCTGCACAACCAC  950

seq1  CTCCTAGCTACGATGGAGATAGTCCGAGGCACAGGGAACTCAAACCTCAC  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTCCTAGCTACGATGGAGATAGTCCGAGGCACGGGGAACTCAAACCTCAC  1000

seq1  AGGCCTTTGAGCCTCCGAG-AGAACAGGCTTTGTGGGTTTC-TTCTGACT  1048
      ||||||||||||||||||| |||||| |||||||||||||| ||||||||
seq2  AGGCCTTTGAGCCTCCGAGAAGAACA-GCTTTGTGGGTTTCTTTCTGACT  1049

seq1  CCTTCAATATG-TACCAAATTGTCCATCTTATCATTCCCTGTTTGTGGAG  1097
       |||| ||||| ||| ||||||||||||| |||||| ||||||||| |||
seq2  -CTTC-ATATGTTACAAAATTGTCCATCTAATCATTTCCTGTTTGT-GAG  1096

seq1  AAAGTTGTCACAGGAGCTTGGTGACAAGTTGTTTGAACTCTGACAGATTG  1147
      |||||||||||| ||||||||  |||||||||||| |||   ||||||||
seq2  AAAGTTGTCACA-GAGCTTGGGAACAAGTTGTTTG-ACTTGAACAGATTG  1144

seq1  CCTATTTCCT-CTCTG-CTATGGCTGTCTT--GGTTC----TTGTTGG-C  1188
       | ||| ||| ||| | |||||||||||||  |||||     |||||| |
seq2  GCAATTCCCTCCTCGGCCTATGGCTGTCTTGGGGTTCCTGTGTGTTGGCC  1194

seq1  TGAAA  1193
      |||||
seq2  TGAAA  1199

seq1: chr7_103609747_103610374
seq2: B6Ng01-087N23.g_68_695 (reverse)

seq1  CACACACACACACACATATATATATATATTTTCCTCCCAAATTAAATAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACATATATATATATATTTTCCTCCCAAATTAAATAGA  50

seq1  AGGAACAGGGAGAAGAGCAAGTGCTTGGACAGAAGGTTCCAAAAGGTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGGGAGAAGAGCAAGTGCTTGGACAGAAGGTTCCAAAAGGTTGC  100

seq1  CCAGAGAGAGTGCCATTTCTATAGATTGCTGTCTTCATTCTGCTGGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAGAGTGCCATTTCTATAGATTGCTGTCTTCATTCTGCTGGAGGT  150

seq1  CACCAATAATACAGAAGGTGATCATTGCCATCAGTAATCTCATTCTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATAATACAGAAGGTGATCATTGCCATCAGTAATCTCATTCTGCCT  200

seq1  ACCACTGGCTCCGAAGTTCCACAGTGCTCTGTAGTTTGAGCCCAGAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGGCTCCGAAGTTCCACAGTGCTCTGTAGTTTGAGCCCAGAAATG  250

seq1  GGACCATGAGGGTGGCCCAACATATGTTTTGCCCCTACAAAAACCCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATGAGGGTGGCCCAACATATGTTTTGCCCCTACAAAAACCCATAG  300

seq1  AACTTAAACAGCTTCTAGCACTACCCTTGCCAGGCCTCTCTGATATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAACAGCTTCTAGCACTACCCTTGCCAGGCCTCTCTGATATTATT  350

seq1  CATGCCAACTGTGGAGTCCAGTCAATATTAGCTTTGGTTTTCATTCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAACTGTGGAGTCCAGTCAATATTAGCTTTGGTTTTCATTCAGAT  400

seq1  CAAAGCAAAATCCATTTCACAAATATTTATTAAGGCCCAACAGGTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAAATCCATTTCACAAATATTTATTAAGGCCCAACAGGTTTTTT  450

seq1  TACACTGGCAGTGTTGTCTAGGTTTTATCAGTTGGGGATCAGGGCTCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGCAGTGTTGTCTAGGTTTTATCAGTTGGGGATCAGGGCTCACT  500

seq1  GTTGTCTTTGCAGTGATTTTCAAAGCAACATCCATTAACCCTTGAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTTTGCAGTGATTTTCAAAGCAACATCCATTAACCCTTGAAGTTT  550

seq1  AATAACTCATCATTCTGTTTTCCTAAGGAGACGGTCTTTTTAGATTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTCATCATTCTGTTTTCCTAAGGAGACGGTCTTTTTAGATTCTTA  600

seq1  GATTCCTAGGAATGTGTTAGTGGAATTC  628
      ||||||||||||||||||||||||||||
seq2  GATTCCTAGGAATGTGTTAGTGGAATTC  628