BAC Information

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BAC

Clone NameB6Ng01-089G20
Chromosome7 (Build37)
Map Location 126,330,998 - 126,332,118
singlet/doubletsinglet
Overlap genenone
Upstream gene2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139
Downstream geneLOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089G20.bB6Ng01-089G20.g
ACCDH902008DH902009
length1,1791,111
definitionDH902008|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G20, 5' end.DH902009|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacttaatagtaaaagactgaatggtttcccccaaagatcatg
atcaggactgcctcagagatactacaggtgtggctgctgtgtcacatgcg
tatcagtaggtgacagagaagagagagactatgttcagtgttctgacctg
tgaacatctgaaaagattagtagcctaatgatctctggggagttggtggg
ggagaagcaaggccaagatgaccatcagtctggcaccataaagcacagac
agggagctagcctgagatgaccaccagtccagtaccactcaccccatagc
agagcatgccaagatgtcccctgtgccataatacacataatttatcatgt
tcataatgcacaggtggggcatagcactcctgagatggccccagacactc
agagaccccaagtgcctctaagaagaacaagtaagtggtagagaaatgga
agagaaagagaaacagaagaatgtgagcataatgaagagaggcagaacta
gagacttgagggtagtgaggaacagcctgatgtgaatagccagtgatgcc
acctaggacctggcctgtgttgccaccagggccacatctgggcccatggc
cctatagtagtagggatctgttaccaccaaaggccaggcagatgtccctg
gtctgggctgccatctggggacatgttgatgtctgagagctgtgctggcc
ccataccttgtctgggtatcttgagagggccagccctgggaatacaagga
gagctgcccccacccctatccacctgcagtactctggagagaggacccat
agatgacccagaaagcacagtagcccaaggaagcacagtagagttggccc
tgtctgcctatcagaagcacctgaggcaatgagcatgggggagtgggccc
tgcctcttgtctgctgtgctgtacagtcattgagggaagagaatcgctcc
cctcccctatggcaggcaggagagctggctccaaatggggtcatggagag
caggagaagctgatcccggcacctccctcccacttcgactacactggctg
cactcaagttcccttcaagttttgaggtcccgtcccgaatctcttaagta
taaacagtgatgtgaattgtagacttttacctcaggtgccttttgggcca
tggtttttctgagacatgaataaaccctt
gaattcccacagtctacttgagttgggtgtgggagaacctacctataatc
ccagcattggagaggctgaggcagaagaattaagggttaggggttagcct
gggctatgtagtgagaccctgtgctcccaggaaaaatcaaacccctgaag
gtagaattttgttccaaagctgatccctttgcctggctatgaagaacaat
ggcatgggagacctgatcgaaaaactggagacatccatctatctgtccat
ccatccatccatcctcgctttcagcagactttgtacagctcttcatgtgt
gctgttgctttctggtgctaaaaagtgcgacacccatatgcataaaagat
taagtgtttaaagaggtcacagcaaagctgtaaactaagtgtggcactct
tcttggcgtagggccctggataaccacacaagtaactggtcttgctaagg
gtatgcagatgtgagcctcaaagtcagacttcctgtgtgcccagagttta
ttaaaaggcttctgtttggtaacctagcctatggtcacagtggaagaggt
aatgctaagctccattctacagatgagaaaactgaggtacagagaagttc
agtgacttggtaaggacctcctgactgagagtcagcccaaggtactctga
caccagagtctatgctgaagtcactgaggagcttgtgccggtgcaaggac
aggcacgtgacagaatttgtcctgctgccatgcagccctcctgtgtcctc
ctgtgtctctgttttcccttcacttgaattctcagtacagtatcagagaa
gattccagaaacaaccctgggtggattcataggtgactgagctagaaata
taagcatgatgtcagagcaggagctgagtacccaaatgtagcaagcctgg
tgatagcgaccacagtgaggcagcatgctgccctttcttcatgttcacga
ggaagtatgctgcccatcatgattctgagagtctcagcttctcatccaaa
cctcatttcctccaccttttgtaggttgagataaacctaagaacaacttc
tttagcgaaacagtagccaaaacacaagttgtagcttaacctttactaag
ttggaaacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126330998_126332118
seq2: B6Ng01-089G20.g_69_1179

seq1  GAATTCCCACAGTCTACTTGAGTTGGGTGTGGGAGAACCTACCTATAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACAGTCTACTTGAGTTGGGTGTGGGAGAACCTACCTATAATC  50

seq1  CCAGCATTGGAGAGGCTGAGGCAGAAGAATTAAGGGTTAGGGGTTAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATTGGAGAGGCTGAGGCAGAAGAATTAAGGGTTAGGGGTTAGCCT  100

seq1  GGGCTATGTAGTGAGACCCTGTGCTCCCAGGAAAAATCAAACCCCTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATGTAGTGAGACCCTGTGCTCCCAGGAAAAATCAAACCCCTGAAG  150

seq1  GTAGAATTTTGTTCCAAAGCTGATCCCTTTGCCTGGCTATGAAGAACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATTTTGTTCCAAAGCTGATCCCTTTGCCTGGCTATGAAGAACAAT  200

seq1  GGCATGGGAGACCTGATCGAAAAACTGGAGACATCCATCTATCTGTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGAGACCTGATCGAAAAACTGGAGACATCCATCTATCTGTCCAT  250

seq1  CCATCCATCCATCCTCGCTTTCAGCAGACTTTGTACAGCTCTTCATGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATCCATCCTCGCTTTCAGCAGACTTTGTACAGCTCTTCATGTGT  300

seq1  GCTGTTGCTTTCTGGTGCTAAAAAGTGCGACACCCATATGCATAAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGCTTTCTGGTGCTAAAAAGTGCGACACCCATATGCATAAAAGAT  350

seq1  TAAGTGTTTAAAGAGGTCACAGCAAAGCTGTAAACTAAGTGTGGCACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTTAAAGAGGTCACAGCAAAGCTGTAAACTAAGTGTGGCACTCT  400

seq1  TCTTGGCGTAGGGCCCTGGATAACCACACAAGTAACTGGTCTTGCTAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCGTAGGGCCCTGGATAACCACACAAGTAACTGGTCTTGCTAAGG  450

seq1  GTATGCAGATGTGAGCCTCAAAGTCAGACTTCCTGTGTGCCCAGAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAGATGTGAGCCTCAAAGTCAGACTTCCTGTGTGCCCAGAGTTTA  500

seq1  TTAAAAGGCTTCTGTTTGGTAACCTAGCCTATGGTCACAGTGGAAGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGCTTCTGTTTGGTAACCTAGCCTATGGTCACAGTGGAAGAGGT  550

seq1  AATGCTAAGCTCCATTCTACAGATGAGAAAACTGAGGTACAGAGAAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAGCTCCATTCTACAGATGAGAAAACTGAGGTACAGAGAAGTTC  600

seq1  AGTGACTTGGTAAGGACCTCCTGACTGAGAGTCAGCCCAAGGTACTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTGGTAAGGACCTCCTGACTGAGAGTCAGCCCAAGGTACTCTGA  650

seq1  CACCAGAGTCTATGCTGAAGTCACTGAGGAGCTTGTGCCGGTGCAAGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAGTCTATGCTGAAGTCACTGAGGAGCTTGTGCCGGTGCAAGGAC  700

seq1  AGGCACGTGACAGAA-TTGTCCTGCTGCCATGCAGCCCTCCTGTGTCCTC  749
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGCACGTGACAGAATTTGTCCTGCTGCCATGCAGCCCTCCTGTGTCCTC  750

seq1  CTGTGTCTCTGTTTTCCCTTCACTTGAATTCTCAGTACAGTATCAGAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTCTGTTTTCCCTTCACTTGAATTCTCAGTACAGTATCAGAGAA  800

seq1  GATTCCAGAAACAACCCTGGGTGGATTCATAGGTGACTGAGCTAGAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAGAAACAACCCTGGGTGGATTCATAGGTGACTGAGCTAGAAATA  850

seq1  TAAGCATGATGTCAGAGCAGGAGCTGAGTACCCAAATGTAGGCAAGCCTG  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAGCATGATGTCAGAGCAGGAGCTGAGTACCCAAATGTA-GCAAGCCTG  899

seq1  GTGGATAGCGACCACCAGTGAGGCAGGCATGCTGCCCTTTCCTCCATGTT  949
      || ||||||||||| |||||||||| |||||||||||||| || ||||||
seq2  GT-GATAGCGACCA-CAGTGAGGCA-GCATGCTGCCCTTT-CTTCATGTT  945

seq1  CACGAGGAAGTATGCTGCCCATCATGATTCTGAGAGTCCTCAGCCTTCTC  999
      ||||||||||||||||||||||||||||||||||||| ||||| ||||| 
seq2  CACGAGGAAGTATGCTGCCCATCATGATTCTGAGAGT-CTCAG-CTTCT-  992

seq1  CATCCAAACTCCATTT-CTCCACCCTTTGGTAGGTTGAGATAAACCTAAA  1048
      |||||||||  ||||| ||||| ||||| |||||||||||||||||| ||
seq2  CATCCAAACCTCATTTCCTCCA-CCTTTTGTAGGTTGAGATAAACCT-AA  1040

seq1  GAACAAC-TCTTTAGCAGAAACAGTAGCACAAACACAAGTTGTAGCTAAC  1097
      ||||||| |||||||| |||||||||||  ||||||||||||||||| | 
seq2  GAACAACTTCTTTAGC-GAAACAGTAGCCAAAACACAAGTTGTAGCTTAA  1089

seq1  ACTTTACTTAGAGTTGGGAACACA  1121
       |||||||   |||||| ||||||
seq2  CCTTTACT--AAGTTGGAAACACA  1111