BAC Information

Click to search

BAC

Clone NameB6Ng01-089O14
Chromosome7 (Build37)
Map Location 53,717,131 - 53,816,372
singlet/doubletdoublet
Overlap geneSergef
Upstream geneBax, Dhdh, Nucb1, Tulp2, Myd116, Plekha4, Hsd17b14, Bcat2, Fgf21, Fut1, Izumo1, Rasip1, 5430432N15Rik, Fut2, Sec1, Gm484, Car11, Dbp, Sphk2, Rpl18, 4930403C10Rik, Spaca4, Sult2b1, EG545963, Lmtk3, Pscd2, Kcnj14, Grwd1, Grin2d, Kdelr1, Syngr4, Tmem143, Emp3, BC013491, LOC677321, Abcc6, Nomo1, Kcnj11, Abcc8, Ush1c, Otog, Myod1, Kcnc1
Downstream geneTph1, Saal1, Saa3, Saa4, LOC100040106, Saa1, Saa2, Hps5, Gtf2h1, EG668838, EG384622, Ldha, Ldhc, Tsg101, Uevld, C86187, LOC384623, ENSMUSG00000056509, Spty2d1, LOC100040174, Tmem86a, Ptpn5, LOC100041710, Mrgpra6, EG668725, Gm660, Mrgpra1, LOC668846, LOC100040217, LOC668727, Mrgpra2, LOC638950, Mrgprc4-ps, LOC677457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089O14.bB6Ng01-089O14.g
ACCDH902361DH902362
length1,0661,177
definitionDH902361|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O14, 5' end.DH902362|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,815,307 - 53,816,372)(53,717,131 - 53,718,299)
sequence
gaattctatgggtcagggttcagcaaatgtaaatcctcacagtgaggcaa
caagaacaaacaccactcagtttctgaggagtatcctgacctgaaaattc
ggttaagagcagcatacagcatttcaggattgactacctgatgaactcag
tttgtcacatacacacacacatcctggagacagtgcgcctcagccataca
ccagggtcagctctcagtagcgacccccaagggcaagtgtcctgctctct
gctgatgctgctcacggtggccttcccaccgcctgcagtgcaggagaagt
cagactcaaggacggtgacggtgatccgctctgtctctttgcttcttcca
ttctacatggggttgggaaatcttgacaactgactcagggaggctggcta
gagctgtggctcatgacttgcagagggtctcacaggtctctactcatggt
tggtagggaaatgaggtcctgtacagtcatgtgatcctgaagttgtgagc
tagtggggaggttttagtatgtataggtttccagagcatggctttcaggc
ttgttaggtttgttgttgttgttgtttgtttgttatagtgtgctagcgtg
acatcaagagcactttgaggagagaccctttcttatgtgctgtaaacatg
tccacagtcagagaacctagccacccttgctaggaaatgagacagttaaa
ctccaccctcacgcagggggtcatgtgaccaaagcaagcaattctaagcc
cacagtagaacacaggtcagcttcctgataacagagcaagtgcccacctc
tcatctgtagagaccaggagagtgtgtcatagagagccagggacagactt
ctggcctgtctctacaccttactggctgagggagactttgtcagctcaag
gctcaccaagtagaaagcaagtctgctctgtaaagctgatcgggattggc
ttcttccttgctttgccgctttttttccacaggactagtttagcccttac
cgcctcccacctagctggcaccccagcccaaccctccttgtggtaccctc
caggggaacctgatga
gaattcctgtgggactatccatgtctctcaccagtcccccgtgctccccc
acagatagagacagagacagagatacagccagaagttctgatgggccctt
gataaatacacatgtgcagttggatggcttcacctagctttcctcatcga
atggtccatgggacctgaggagcaggttttgctactcttttttattttat
ctatctatccatttatttacttatttacttatttatttttgcagtgcgga
tgtggagcttggtgagtctgactctaaagccacagcctgtcagtctcacc
actgggccatgaccaagcagactttctcgcaggaaagctgagacaggatt
cctgcccaaagtagttcttctatagatctttcagagtttccccctttcag
gatgcagtaaacaccaaggggcctagggagtttctcattcaggagggaga
caactcatgatcacaaagcaagacccccattcctccctgggatctgtctc
agacatagggtcctggtcttcaagttcttcaaggttttatcatgtttaat
ccgggccatttagcatccaaggatgttgtttcttgagtaaaccaatgctt
gggcagaaaacgagcatctttcctcttgaaagcaagcctggatgcaagat
gctccagaaatccatttggcggttgctgagaggcggggagagtgtgcagg
ctgctgaaatgatgagccaatggggcagtgctagggacgactgagcaaga
ggctgctgcagctctgcttccttcagacccagttccctccgtagcggtat
cttgtgcctcggttcctggagaccaggcagcagcactatcctcttgggaa
gggtccttacagccctctttctttaccctcccaccaccacataaccaaag
cctgacccagcacagctgacactggaggcattgtcaggaagtttactaaa
tgctgggggcagaggggagggacggccacagcaatacaccccgtcctcca
gccagtgtgctaccagaagaagtttcaactcctccttcttacggccaggg
acagaagatggcaagcctggtgtctcctcagcatggagggaaaggcttca
aaaactcctgactgttagctgtgacggatggaaggggtaaatacatttcc
taccttctaggagtttcaaattgcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_53815307_53816372
seq2: B6Ng01-089O14.b_48_1113 (reverse)

seq1  TCATCAGGATCCCCTGGTAGGGTACCACAGGGAGGGTGGGGCTGGGTGCC  50
      |||||||| |||||||| ||||||||||| ||||||| ||||||||   |
seq2  TCATCAGGTTCCCCTGG-AGGGTACCACAAGGAGGGTTGGGCTGGGGTGC  49

seq1  CAGCAAGGTGGGA-GCGGCTAGGGCTAAACTAGTCCTGTGGGAAAGAAGC  99
      |||| |||||||| ||||  ||||||||||||||||||||| ||| ||||
seq2  CAGCTAGGTGGGAGGCGGTAAGGGCTAAACTAGTCCTGTGGAAAAAAAGC  99

seq1  G--CAAGCAAGGAAGAAGCC-ATGCCGATCAGCTTTACAGAGCAGACCTT  146
      |   |||||||||||||||| || |||||||||||||||||||||| |||
seq2  GGCAAAGCAAGGAAGAAGCCAATCCCGATCAGCTTTACAGAGCAGA-CTT  148

seq1  GCTTTCTACTTGGTGAGCCTTGAGCTGACAAAGTCTCCCTCAGCCAGTAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTACTTGGTGAGCCTTGAGCTGACAAAGTCTCCCTCAGCCAGTAA  198

seq1  GGTGTAGAGACAGGCCAGAAGTCTGTCCCTGGCTCTCTATGACACAACTC  246
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTGTAGAGACAGGCCAGAAGTCTGTCCCTGGCTCTCTATGACAC-ACTC  247

seq1  TCCTGGTCTCTACAGATGAGAGGTGGGCACTTGCTCTGTTATCAGGAAGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCCTGGTCTCTACAGATGAGAGGTGGGCACTTGCTCTGTTATCAGGAAG-  296

seq1  CTGACCTGTGTTCTACTGTGGGCTTAGAATTGCTTGCTTTGGTCACATGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGTGTTCTACTGTGGGCTTAGAATTGCTTGCTTTGGTCACATGA  346

seq1  CCCCCTGCGTGAGGGTGGAGTTTAACTGTCTCATTTCCTAGCAAGGGTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTGCGTGAGGGTGGAGTTTAACTGTCTCATTTCCTAGCAAGGGTGG  396

seq1  CTAGGTTCTCTGACTGTGGACATGTTTACAGCACATAAGAAAGGGTCTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTCTCTGACTGTGGACATGTTTACAGCACATAAGAAAGGGTCTCT  446

seq1  CCTCAAAGTGCTCTTGATGTCACGCTAGCACACTATAACAAACAAACAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAAGTGCTCTTGATGTCACGCTAGCACACTATAACAAACAAACAAC  496

seq1  AACAACAACAAACCTAACAAGCCTGAAAGCCATGCTCTGGAAACCTATAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAAACCTAACAAGCCTGAAAGCCATGCTCTGGAAACCTATAC  546

seq1  ATACTAAAACCTCCCCACTAGCTCACAACTTCAGGATCACATGACTGTAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAAACCTCCCCACTAGCTCACAACTTCAGGATCACATGACTGTAC  596

seq1  AGGACCTCATTTCCCTACCAACCATGAGTAGAGACCTGTGAGACCCTCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTCATTTCCCTACCAACCATGAGTAGAGACCTGTGAGACCCTCTG  646

seq1  CAAGTCATGAGCCACAGCTCTAGCCAGCCTCCCTGAGTCAGTTGTCAAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCATGAGCCACAGCTCTAGCCAGCCTCCCTGAGTCAGTTGTCAAGA  696

seq1  TTTCCCAACCCCATGTAGAATGGAAGAAGCAAAGAGACAGAGCGGATCAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAACCCCATGTAGAATGGAAGAAGCAAAGAGACAGAGCGGATCAC  746

seq1  CGTCACCGTCCTTGAGTCTGACTTCTCCTGCACTGCAGGCGGTGGGAAGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACCGTCCTTGAGTCTGACTTCTCCTGCACTGCAGGCGGTGGGAAGG  796

seq1  CCACCGTGAGCAGCATCAGCAGAGAGCAGGACACTTGCCCTTGGGGGTCG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGTGAGCAGCATCAGCAGAGAGCAGGACACTTGCCCTTGGGGGTCG  846

seq1  CTACTGAGAGCTGACCCTGGTGTATGGCTGAGGCGCACTGTCTCCAGGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGAGCTGACCCTGGTGTATGGCTGAGGCGCACTGTCTCCAGGAT  896

seq1  GTGTGTGTGTATGTGACAAACTGAGTTCATCAGGTAGTCAATCCTGAAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTATGTGACAAACTGAGTTCATCAGGTAGTCAATCCTGAAAT  946

seq1  GCTGTATGCTGCTCTTAACCGAATTTTCAGGTCAGGATACTCCTCAGAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATGCTGCTCTTAACCGAATTTTCAGGTCAGGATACTCCTCAGAAA  996

seq1  CTGAGTGGTGTTTGTTCTTGTTGCCTCACTGTGAGGATTAACATTTGCTG  1046
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGAGTGGTGTTTGTTCTTGTTGCCTCACTGTGAGGATTTACATTTGCTG  1046

seq1  AACCCTGACCCATAGAATTC  1066
      ||||||||||||||||||||
seq2  AACCCTGACCCATAGAATTC  1066

seq1: chr7_53717131_53718299
seq2: B6Ng01-089O14.g_69_1245

seq1  GAATTCCTGTGGGACTATCCATGTCTCTCACCAGTCCCCCGTGCTCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGGGACTATCCATGTCTCTCACCAGTCCCCCGTGCTCCCCC  50

seq1  ACAGATAGAGACAGAGACAGAGATACAGCCAGAAGTTCTGATGGGCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATAGAGACAGAGACAGAGATACAGCCAGAAGTTCTGATGGGCCCTT  100

seq1  GATAAATACACATGTGCAGTTGGATGGCTTCACCTAGCTTTCCTCATCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATACACATGTGCAGTTGGATGGCTTCACCTAGCTTTCCTCATCGA  150

seq1  ATGGTCCATGGGACCTGAGGAGCAGGTTTTGCTACTCTTTTTTATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCCATGGGACCTGAGGAGCAGGTTTTGCTACTCTTTTTTATTTTAT  200

seq1  CTATCTATCCATTTATTTACTTATTTACTTATTTATTTTTGCAGTGCGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCCATTTATTTACTTATTTACTTATTTATTTTTGCAGTGCGGA  250

seq1  TGTGGAGCTTGGTGAGTCTGACTCTAAAGCCACAGCCTGTCAGTCTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGCTTGGTGAGTCTGACTCTAAAGCCACAGCCTGTCAGTCTCACC  300

seq1  ACTGGGCCATGACCAAGCAGACTTTCTCGCAGGAAAGCTGAGACAGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCCATGACCAAGCAGACTTTCTCGCAGGAAAGCTGAGACAGGATT  350

seq1  CCTGCCCAAAGTAGTTCTTCTATAGATCTTTCAGAGTTTCCCCCTTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAAAGTAGTTCTTCTATAGATCTTTCAGAGTTTCCCCCTTTCAG  400

seq1  GATGCAGTAAACACCAAGGGGCCTAGGGAGTTTCTCATTCAGGAGGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGTAAACACCAAGGGGCCTAGGGAGTTTCTCATTCAGGAGGGAGA  450

seq1  CAACTCATGATCACAAAGCAAGACCCCCATTCCTCCCTGGGATCTGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCATGATCACAAAGCAAGACCCCCATTCCTCCCTGGGATCTGTCTC  500

seq1  AGACATAGGGTCCTGGTCTTCAAGTTCTTCAAGGTTTTATCATGTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAGGGTCCTGGTCTTCAAGTTCTTCAAGGTTTTATCATGTTTAAT  550

seq1  CCGGGCCATTTAGCATCCAAGGATGTTGTTTCTTGAGTAAACCAATGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCCATTTAGCATCCAAGGATGTTGTTTCTTGAGTAAACCAATGCTT  600

seq1  GGGCAGAAAACGAGCATCTTTCCTCTTGAAAGCAAGCCTGGATGCAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAAACGAGCATCTTTCCTCTTGAAAGCAAGCCTGGATGCAAGAT  650

seq1  GCTCCAGAAATCCATTTGGCGGTTGCTGAGAGGCGGGGAGAGTGTGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGAAATCCATTTGGCGGTTGCTGAGAGGCGGGGAGAGTGTGCAGG  700

seq1  CTGCTGAAATGATGAGCCAATGGGGCAGTGCTAGGGACGACTGAGCAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAAATGATGAGCCAATGGGGCAGTGCTAGGGACGACTGAGCAAGA  750

seq1  GGCTGCTGCAGCTCTGCTTCCTTCAGACCCAGTTCCCTCCGTAGCGGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGCAGCTCTGCTTCCTTCAGACCCAGTTCCCTCCGTAGCGGTAT  800

seq1  CTTGTGCCTCGGTTCCTGGAGACCAGGCAGCAGCACTATCCTCTTGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCCTCGGTTCCTGGAGACCAGGCAGCAGCACTATCCTCTTGGGAA  850

seq1  GGGTCCTTACAGCCCTCTTTCTTTACCCTCCCACCACCACATAACCAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTTACAGCCCTCTTTCTTTACCCTCCCACCACCACATAACCAAAG  900

seq1  CCTGACCCAGCACAGCTGACACTGGAGGCATTGTCAGGAAGTTTACTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCCAGCACAGCTGACACTGGAGGCATTGTCAGGAAGTTTACTAAA  950

seq1  TGCTGGGGGCAGAGGGAAGGAAC-GCCACAGCAATACA-CACGTCCTCCA  998
      |||||||||||||||| ||| || |||||||||||||| | |||||||||
seq2  TGCTGGGGGCAGAGGGGAGGGACGGCCACAGCAATACACCCCGTCCTCCA  1000

seq1  GCAAGTG-GCTACCAAGAGAAGTTTCAACT-CTCCTTCTTACGGCCAGGG  1046
      || |||| |||||||  ||||||||||||| |||||||||||||||||||
seq2  GCCAGTGTGCTACCAGAAGAAGTTTCAACTCCTCCTTCTTACGGCCAGGG  1050

seq1  ACAG-AGATGGC-AGCCT-GTGTCTCC-CAGCATGAAGGCAAAGGCTTCA  1092
      |||| ||||||| ||||| |||||||| ||||||| ||| ||||||||||
seq2  ACAGAAGATGGCAAGCCTGGTGTCTCCTCAGCATGGAGGGAAAGGCTTCA  1100

seq1  AAAACCTCTGACCTGTTAGCTGTGACGGATGG-AGGGTTAGATACATTTC  1141
      |||||  |||| |||||||||||||||||||| |||| || |||||||||
seq2  AAAACTCCTGA-CTGTTAGCTGTGACGGATGGAAGGGGTAAATACATTTC  1149

seq1  TTACTTTCTAGGAGTTTCAAATTGCATA  1169
       ||| |||||||||||||||||||||||
seq2  CTACCTTCTAGGAGTTTCAAATTGCATA  1177