BAC Information

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BAC

Clone NameB6Ng01-090C06
Chromosome7 (Build37)
Map Location 135,130,534 - 135,131,426
singlet/doubletsinglet
Overlap genenone
Upstream geneMvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus
Downstream genePycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090C06.bB6Ng01-090C06.g
ACCDH902522DH902523
length1,264897
definitionDH902522|Mus musculus domesticus DNA, BAC clone: B6Ng01-090C06, 5' end.DH902523|Mus musculus domesticus DNA, BAC clone: B6Ng01-090C06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacataaacataataaaagcaatctacagcaaacca
gtagccaacatcaaactaaatggtgagagactggaagcaatcccactaaa
atcagggactagacaaggctgcccactctctccctacctattcaatatag
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaaagaa
atacaaattggaaaggaagaactctaattatcactatttgcagatgatat
gatagtatacttaagtgaccccaaaaattccaccagagaactcctaaacc
tgataaacaacttcagttaagtagctggttataaaattaactcaaacaaa
tcagtggcctttctctacacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttcacaatagccacagataatataaaataccttggtg
tgactctaactaaggaagtgaaaattttgtataataagaacttcaagtgt
ctgaagaaagaaattgaagaaaatcccagaagttggaaatatctcccatg
ctcatggattggcaggattaatatagtcaaaatggctatcttgccaaaag
caatctacagattcaatgcaatctctatcaaaattccaactcaattcttc
acagagttagaaagagcaatttgcaaattcatctggaataacaaaaaacc
tagaatagcaaaaactattctcaacaataaaagaacctctggtggaatca
ccatccctgacctcaagctgtactacagagcaattgtgattaaaactgta
tggtactggtacaatgacagacaggtagatcaatggaacagaactgaaga
cccagaaatgaacccacacgcctatggttacctgatctttgacaaaggag
ctaaaaccatccagtggaaaaaagacagcatctttaacaaatggtgctgg
ctcaactggtggttagcatgtagaagatgtgaattgatccattcttatct
ccttgtacaaagctcaaatccaagtggatcaggactcacataaccaaaga
cactgaactcatagaggagaagtgtgaagaagtcttgaaactgttgccac
agaggacattctgaatgacaccattgcatgtgctagattagattcacaat
ggactctaaatgcagcttcagtctggggataggctcacggtagacggact
gtcttcaaggtccagagttcaatccaggcacaccatggggggcttcacac
actcctcagcagat
gaattctgcctgcctctgcctcccaagtgctgggattaaaggcactttct
ctttctctctctctctctctctctctctctctctctctccctctctcaaa
gatttatttattaactttatgtatatgaatacactgtagctgtctcagac
acaccagaagagggcatcggatcccattacagatggttgtgagccaccat
gtggttgctgggatttgaactcaggacctctggaagggcagtcagtgctc
ttaaccactgagccagaaatccacctgcctctgcctcccaagggctggga
ttaaaggcgtgcatcaccactgcccggcggtatttgacattattttgtat
attccattttctttgatatttgcccagaagtgataatgctatgatactga
catgtattgagcttttggagacaaggtgtgctggcagatgcccatcatct
cttggtattcagaagccaaagcaggaagacaaagttgaggcctttgtggt
gttggcctaaagataatagaataatccccaatagcagttagcagatttga
cctgtgcctgttttttgtttatgatggctagcaatgtaaggctttgggaa
ataattgaatctagagttgttagaacccatttaatctggggatgagaggc
atctggtagattttgcacttccactaatatgtagtgtagtcgtaactctt
ggctgtagttttagtctctgtgtactctgtggctggggaggaggaggagg
gctgtttttgcttgagtgctatagtgagaagtcaagctggactttctaaa
aaaaagcaccttttaatttgtgtaacggggattttcttttttggaaacta
gtcttggctgggccaacacttctatgtagaccagatcgacctccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_135130534_135131426
seq2: B6Ng01-090C06.g_72_964

seq1  GAATTCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCACTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCACTTTCT  50

seq1  CTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCAAA  100

seq1  GATTTATTTATTAACTTTATGTATATGAATACACTGTAGCTGTCTCAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTATTAACTTTATGTATATGAATACACTGTAGCTGTCTCAGAC  150

seq1  ACACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACCAT  200

seq1  GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGGGCAGTCAGTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGGGCAGTCAGTGCTC  250

seq1  TTAACCACTGAGCCAGAAATCCACCTGCCTCTGCCTCCCAAGGGCTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCACTGAGCCAGAAATCCACCTGCCTCTGCCTCCCAAGGGCTGGGA  300

seq1  TTAAAGGCGTGCATCACCACTGCCCGGCGGTATTTGACATTATTTTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCGTGCATCACCACTGCCCGGCGGTATTTGACATTATTTTGTAT  350

seq1  ATTCCATTTTCTTTGATATTTGCCCAGAAGTGATAATGCTATGATACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATTTTCTTTGATATTTGCCCAGAAGTGATAATGCTATGATACTGA  400

seq1  CATGTATTGAGCTTTTGGAGACAAGGTGTGCTGGCAGATGCCCATCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTGAGCTTTTGGAGACAAGGTGTGCTGGCAGATGCCCATCATCT  450

seq1  CTTGGTATTCAGAAGCCAAAGCAGGAAGACAAAGTTGAGGCCTTTGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTATTCAGAAGCCAAAGCAGGAAGACAAAGTTGAGGCCTTTGTGGT  500

seq1  GTTGGCCTAAAGATAATAGAATAATCCCCAATAGCAGTTAGCAGATTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCTAAAGATAATAGAATAATCCCCAATAGCAGTTAGCAGATTTGA  550

seq1  CCTGTGCCTGTTTTTTGTTTATGATGGCTAGCAATGTAAGGCTTTGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCTGTTTTTTGTTTATGATGGCTAGCAATGTAAGGCTTTGGGAA  600

seq1  ATAATTGAATCTAGAGTTGTTAGAACCCATTGAATCT-GGGATGAGAGGC  649
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  ATAATTGAATCTAGAGTTGTTAGAACCCATTTAATCTGGGGATGAGAGGC  650

seq1  ATCTGGTAGATTTTGCACTTCCACTAATATGTAGTGTAGTCGTAACTCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTAGATTTTGCACTTCCACTAATATGTAGTGTAGTCGTAACTCTT  700

seq1  GGCTGTAGTTTTAGTCTCTGTGTACTCTGTGGCTGGGGAGGAGGAGGAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTAGTTTTAGTCTCTGTGTACTCTGTGGCTGGGGAGGAGGAGGAGG  750

seq1  GCTG-TTTTGCTTGAGTGCTATAGTGAGAAGTCAAGCTGGACATCCTTAA  798
      |||| ||||||||||||||||||||||||||||||||||||| | || ||
seq2  GCTGTTTTTGCTTGAGTGCTATAGTGAGAAGTCAAGCTGGACTTTCTAAA  800

seq1  AAAAAGCAACTTTTAAATTGTGTTACTGGGATTTTACTTTTTTGGAAACT  848
      |||||||| ||||||| |||||| || |||||||| ||||||||||||||
seq2  AAAAAGCACCTTTTAATTTGTGTAACGGGGATTTT-CTTTTTTGGAAACT  849

seq1  AGCCTTGGCTGGCCTAGAACTTCCTATGTAGACCAGACTGACCTC  893
      || ||||||||| | |  |||| ||||||||||||||  ||||||
seq2  AGTCTTGGCTGGGCCAACACTT-CTATGTAGACCAGATCGACCTC  893