BAC Information

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BAC

Clone NameB6Ng01-090K23
Chromosome7 (Build37)
Map Location 95,738,435 - 95,856,605
singlet/doubletdoublet
Overlap genenone
Upstream geneGrm5, Ctsc, LOC100039756, Rab38, LOC100039924, LOC666598
Downstream geneEG621562, Tmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090K23.bB6Ng01-090K23.g
ACCDH902919DH902920
length1,1151,050
definitionDH902919|Mus musculus domesticus DNA, BAC clone: B6Ng01-090K23, 5' end.DH902920|Mus musculus domesticus DNA, BAC clone: B6Ng01-090K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,855,452 - 95,856,605)(95,738,435 - 95,739,505)
sequence
gaattcttttcctgtccttctctttaattattgtctgttaagctgattat
ggtgatgtatataatacagaataaatgtaaaataaaacaagagaaaatat
catggtatggttcattctgtggaccagcaagtttatgtaatacacagttc
agaaaacaggattccaagcaatagaaaaatattttgtaaattcctaagct
catagaagcctttgtttggaatgatgaatcttttccttagttggctgaca
cttgcaagtaaaaatgaatcataagtgttatatggtttgctcagttttct
tgggatgtgatccagagaaaaataactaattcctttactatttgataaaa
tgtaggcattatgaagacagcttgtctcttgactttcaaaggaagaaaac
agcatagaggagcagtgcccaagttgtgatcaatttgaacttcatatctc
tgaaggtcaaggttggaaccctattgagggaccatctggaaaatgtcttg
gaaaatctaataaaaagactgtcagcatgttcattaagcactgcatgtgt
tacatacatggaatcaatacatcaacatctgggggaaaacatatttgtaa
catttaatgataatacaacattacatagtattcaataatactctcacaca
ttaatataatcaagttcctacctcctagtactgagcattgcaagtattca
aagttagcatgtgctgaaatggccatgatattcaaagcaatgaaaaatat
aatatgagtggtttgtatggctgtcttccaaggggaaatcagacttacac
ttttataggtgcatatttttaaagggtggtttaaaattaaaggattatga
attgtagacttatctattatatttcagtttatttattttgcttcctatac
aagttacatttttgtttctttattggggagagctatagaaagtgtgactg
atatctttcatgggtatagcacagtattaaatcagactatgtatcaacag
actctgtcatcttggtgcttaaactttttaaatttctctatttatagaaa
tttataatatactgaatcattcctcaaatgtgttcatgtaatcttttttc
cttctttttgcattc
gaattctaaacactcagggatcttatcctcaggagatctctaaagtgatt
atcaacaattatcatggaatttatttatggcatttatcacctagaaatag
ctcttgttcatatgcattctaattggtgattttcctctgaagtattttct
ttaattggctctaacatcagaaaagacagatccaattaaggtctcattcc
ttagaattaaaaataaccaatgctattgtcaaaaacagcaagataaatta
ttgttgaagggaaattggaaagctgttgactatacatagtccaaagtgac
tcaaacatgaataaataaacgcatcacagaggtatcatagcagttctgtg
acactgtagcagtgtatggacactgaagccttcacttggccagggtgttg
aaaattattagaccatactacaattgctcacaatcttagggaaggaactc
aaaacttgtccatagatgctagtttcagctttctcaagcttagatgtatc
agacagggtaattcatttaaaccttttcatgttattttacatacttggaa
aatagatgtagcactactttccttagaaatttctatttaaaaaccgatta
atatgcatgtaccataatgcaaacaatacttgacacgcctcttgtcactt
tagcattttcccacacatcacttgctgaactaaagcaagatctccaagct
gtttcttgttcttctttccccctcctccagttcctcatgagtacctcagc
ccctggttccaaatatctgaattatgtagaccactaatattaatttaatg
gtattctcagaaagtgttttctctttgccttcagtataggaatgttttag
ataaaatacctatcaactgtgacctttactgcacaagaaaaagatgttta
acaatgaaagtagatacatacagttagagagagaaccttaaatatacatt
tatatgtaaaaaaaattatttgtgctagtatgttcttaagtactgagatc
agtagctgttcatagaggctcacaacacgtagcatcacaggatatgaatg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95855452_95856605
seq2: B6Ng01-090K23.b_49_1163 (reverse)

seq1  GAATGCAAAAAAAAAAGAAAGAAAAAAAAGAAATAAACATGGGAACCACA  50
      ||||||     |||||||| ||||||| |       |||||      |||
seq2  GAATGC-----AAAAAGAAGGAAAAAAGA-----TTACATG-----AACA  35

seq1  TATTTGA-GAATGATATCAGTATAATAATTAAATATCCTATTAAAATTAG  99
       |||||| ||||||| |||||||| ||  ||||| ||    || || |||
seq2  CATTTGAGGAATGAT-TCAGTATATTA--TAAATTTC----TATAAATAG  78

seq1  AAGGAAAATTTAAAAAAAGTTTAAAGCAACAAAGATGACAGAAGTTCTGT  149
      |    ||||||  ||||||||| |||| || |||||||||||   |||| 
seq2  A---GAAATTT--AAAAAGTTT-AAGC-ACCAAGATGACAGA--GTCTG-  118

seq1  TTGATACCAATAGTCTGATTTTAATACTGTGCCTAATACCCATGAAAAGA  199
      |||||||  ||||||||| |||||||||||||   ||||||||| |||||
seq2  TTGATAC--ATAGTCTGA-TTTAATACTGTGC--TATACCCATG-AAAGA  162

seq1  TATTCAGTCACCACTTTCTATAGCTCTTCCCCAATAAAGAAACAAAAATG  249
      || ||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  TA-TCAGTCA-CACTTTCTATAGCTC-TCCCCAATAAAGAAACAAAAATG  209

seq1  TAACTTGTATAGGAAGCAAAATAAATAAACTGAAATATAATAGATAAGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGTATAGGAAGCAAAATAAATAAACTGAAATATAATAGATAAGTC  259

seq1  TACAATTCATAATCC-TTAATTTTTAACCACCCTTTAAAAATATGCACCT  348
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  TACAATTCATAATCCTTTAATTTTAAACCACCCTTTAAAAATATGCACCT  309

seq1  ATAAAAGTGTAAGTCTGATTTCCCCTTGGAAGACAGCCATACAAACCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTGTAAGTCTGATTTCCCCTTGGAAGACAGCCATACAAACCACT  359

seq1  CATATTATATTTTTCATTGCTTTGAATATCATGGCCATTTCAGCACATGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATATTTTTCATTGCTTTGAATATCATGGCCATTTCAGCACATGC  409

seq1  TAACTTTGAATACTTGCAATGCTCAGTACTAGGAGGTAGGAACTTGATTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTGAATACTTGCAATGCTCAGTACTAGGAGGTAGGAACTTGATTA  459

seq1  TATTAATGTGTGAGAGTATTATTGAATACTATGTAATGTTGTATTATCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGTGTGAGAGTATTATTGAATACTATGTAATGTTGTATTATCAT  509

seq1  TAAATGTTACAAATATGTTTTCCCCCAGATGTTGATGTATTGATTCCATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTACAAATATGTTTTCCCCCAGATGTTGATGTATTGATTCCATG  559

seq1  TATGTAACACATGCAGTGCTTAATGAACATGCTGACAGTCTTTTTATTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAACACATGCAGTGCTTAATGAACATGCTGACAGTCTTTTTATTAG  609

seq1  ATTTTCCAAGACATTTTCCAGATGGTCCCTCAATAGGGTTCCAACCTTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCAAGACATTTTCCAGATGGTCCCTCAATAGGGTTCCAACCTTGA  659

seq1  CCTTCAGAGATATGAAGTTCAAATTGATCACAACTTGGGCACTGCTCCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAGATATGAAGTTCAAATTGATCACAACTTGGGCACTGCTCCTC  709

seq1  TATGCTGTTTTCTTCCTTTGAAAGTCAAGAGACAAGCTGTCTTCATAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGTTTTCTTCCTTTGAAAGTCAAGAGACAAGCTGTCTTCATAATG  759

seq1  CCTACATTTTATCAAATAGTAAAGGAATTAGTTATTTTTCTCTGGATCAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATTTTATCAAATAGTAAAGGAATTAGTTATTTTTCTCTGGATCAC  809

seq1  ATCCCAAGAAAACTGAGCAAACCATATAACACTTATGATTCATTTTTACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAGAAAACTGAGCAAACCATATAACACTTATGATTCATTTTTACT  859

seq1  TGCAAGTGTCAGCCAACTAAGGAAAAGATTCATCATTCCAAACAAAGGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTGTCAGCCAACTAAGGAAAAGATTCATCATTCCAAACAAAGGCT  909

seq1  TCTATGAGCTTAGGAATTTACAAAATATTTTTCTATTGCTTGGAATCCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGCTTAGGAATTTACAAAATATTTTTCTATTGCTTGGAATCCTG  959

seq1  TTTTCTGAACTGTGTATTACATAAACTTGCTGGTCCACAGAATGAACCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAACTGTGTATTACATAAACTTGCTGGTCCACAGAATGAACCAT  1009

seq1  ACCATGATATTTTCTCTTGTTTTATTTTACATTTATTCTGTATTATATAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATATTTTCTCTTGTTTTATTTTACATTTATTCTGTATTATATAC  1059

seq1  ATCACCATAATCAGCTTAACAGACAATAATTAAAGAGAAGGACAGGAAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCATAATCAGCTTAACAGACAATAATTAAAGAGAAGGACAGGAAAA  1109

seq1  GAATTC  1154
      ||||||
seq2  GAATTC  1115

seq1: chr7_95738435_95739505
seq2: B6Ng01-090K23.g_68_1117

seq1  GAATTCTAAACACTCAGGGATCTTATCCTCAGGAGATCTCTAAAGTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACACTCAGGGATCTTATCCTCAGGAGATCTCTAAAGTGATT  50

seq1  ATCAACAATTATCATGGAATTTATTTATGGCATTTATCACCTAGAAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAATTATCATGGAATTTATTTATGGCATTTATCACCTAGAAATAG  100

seq1  CTCTTGTTCATATGCATTCTAATTGGTGATTTTCCTCTGAAGTATTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTCATATGCATTCTAATTGGTGATTTTCCTCTGAAGTATTTTCT  150

seq1  TTAATTGGCTCTAACATCAGAAAAGACAGATCCAATTAAGGTCTCATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGGCTCTAACATCAGAAAAGACAGATCCAATTAAGGTCTCATTCC  200

seq1  TTAGAATTAAAAATAACCAATGCTATTGTCAAAAACAGCAAGATAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTAAAAATAACCAATGCTATTGTCAAAAACAGCAAGATAAATTA  250

seq1  TTGTTGAAGGGAAATTGGAAAGCTGTTGACTATACATAGTCCAAAGTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAGGGAAATTGGAAAGCTGTTGACTATACATAGTCCAAAGTGAC  300

seq1  TCAAACATGAATAAATAAACGCATCACAGAGGTATCATAGCAGTTCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATGAATAAATAAACGCATCACAGAGGTATCATAGCAGTTCTGTG  350

seq1  ACACTGTAGCAGTGTATGGACACTGAAGCCTTCACTTGGCCAGGGTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTAGCAGTGTATGGACACTGAAGCCTTCACTTGGCCAGGGTGTTG  400

seq1  AAAATTATTAGACCATACTACAATTGCTCACAATCTTAGGGAAGGAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATTAGACCATACTACAATTGCTCACAATCTTAGGGAAGGAACTC  450

seq1  AAAACTTGTCCATAGATGCTAGTTTCAGCTTTCTCAAGCTTAGATGTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGTCCATAGATGCTAGTTTCAGCTTTCTCAAGCTTAGATGTATC  500

seq1  AGACAGGGTAATTCATTTAAACCTTTTCATGTTATTTTACATACTTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTAATTCATTTAAACCTTTTCATGTTATTTTACATACTTGGAA  550

seq1  AATAGATGTAGCACTACTTTCCTTAGAAATTTCTATTTAAAAACCGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGTAGCACTACTTTCCTTAGAAATTTCTATTTAAAAACCGATTA  600

seq1  ATATGCATGTACCATAATGCAAACAATACTTGACACGCCTCTTGTCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATGTACCATAATGCAAACAATACTTGACACGCCTCTTGTCACTT  650

seq1  TAGCATTTTCCCACACATCACTTGCTGAACTAAAGCAAGATCTCCAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTTCCCACACATCACTTGCTGAACTAAAGCAAGATCTCCAAGCT  700

seq1  GTTTCTTGTTCTTCTTTCCCCCTCCTCCAGTTCCTCATGAGTACCTCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTGTTCTTCTTTCCCCCTCCTCCAGTTCCTCATGAGTACCTCAGC  750

seq1  CCCTGGTTCCAAATATCTGAATTATGTAGACCACTAATATTAATTTAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTTCCAAATATCTGAATTATGTAGACCACTAATATTAATTTAATG  800

seq1  GTATTCTCAGAAAGTGTTTTCTCTTTGCCTTCAGTATAGGAATGTTTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTCAGAAAGTGTTTTCTCTTTGCCTTCAGTATAGGAATGTTTTAG  850

seq1  ATAAAATACCTATCAACTGTGACCTTTACTGCACAAAGAAAAAGATGTTT  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATAAAATACCTATCAACTGTGACCTTTACTGCAC-AAGAAAAAGATGTTT  899

seq1  AACAATGAAAAGTAAGAATACATACAGTTAAGAGAGAAGAAACCTTAAAA  950
      ||||||| ||||||   |||||||||||| |||||||   ||||||||| 
seq2  AACAATG-AAAGTA--GATACATACAGTT-AGAGAGA--GAACCTTAAA-  942

seq1  TTAATACATTTTATATTGTAAAAAAAATTATTTGTGCTTAGTATGGTTTC  1000
         ||||| |||||| ||||||||||||||||||||| |||||||  |||
seq2  --TATACA-TTTATA-TGTAAAAAAAATTATTTGTGC-TAGTATG--TTC  985

seq1  TTAAGGTACCTGAGGATCAGTAGCTGTTCCATTAGAAGCTCAC-ACACGT  1049
      |||| ||| |||| |||||||||||||||   |||| |||||| ||||| 
seq2  TTAA-GTA-CTGA-GATCAGTAGCTGTTC--ATAGAGGCTCACAACACG-  1029

seq1  TAGCATCACAGGATATGGAATG  1071
      |||||||||||||||| |||||
seq2  TAGCATCACAGGATAT-GAATG  1050