BAC Information

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BAC

Clone NameB6Ng01-091H01
Chromosome7 (Build37)
Map Location 12,928,771 - 12,929,764
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665857, LOC665861, Zscan4f, LOC673742, LOC665887, LOC637541, LOC100042361, Zscan4-ps2, LOC675782, LOC100042386, LOC665926, LOC637571, LOC100043042, LOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8
Downstream geneV1rg11, Zfp551, EG666065, Zfp606, 2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091H01.b
ACCDH903464
length1,034
definitionDH903464|Mus musculus domesticus DNA, BAC clone: B6Ng01-091H01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggctcatacctaaacataataaaagcaatattcagcaaacca
gtagccaacatcaaagtaagtggagagaagctggaagcaatccatgaaaa
tcagggactagacaaggctgcccactttctccctacctattcaatatagt
acttgaagtcctagccagagcaattcgacaacaaaaggagatccagggga
taaaatttggaaaggaagaagtcaaaatatcactatttgcagatgatatg
atagtatttataagtgaccctaaaaattccaacagagaactcctaaacct
gataaacagcttcagtgcagtagctggatataaaattaactcaaacaaat
cagtggcctttctctacacaaaggataaacaggatgagaaagaaatatgg
aaacaacacccttcacaatagtcacaataatattaaataccttcgtgtta
ctctaactacggaagtgaaagatctgtatgataagaacttcaagtctctg
aataaagaaattgaagatctcagaagatggaaagatctcccatgctctct
ccctgcacttttaccttgtaggtcacagatagagttcaaatgtgtgtcat
gatctgcccatgcttgatagccaatagatttaaaggtcagtatgcttagt
caataagtttgaactgtaagcttgctgatgtaacctgtacccctagaaag
tataaaaactgcttgttatagccattctggggttaccttctagtcactca
ccttgagggactaactaagggtcaaccccactgtgccagaaaataaagct
cttgcttttgcattgaaaaaaaaaattgcaaaagttattaaaaaaccttt
cccatcaagtttacttacattcccataccagataaaactgttttctgggt
gttagtgcattccaggggcaaaatgtttgcttgacaaatgcaaagctctg
acgtggactagtccagagaaatcagatcccttcactgcttctataggaaa
ctactgtgcatgaaatctgcccaaatcagtcagt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_12928771_12929764
seq2: B6Ng01-091H01.b_94_1076

seq1  TAGCCAACATCAAAGTAAGTGGAGAGAAGCTGGAAGCAATCCATGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAACATCAAAGTAAGTGGAGAGAAGCTGGAAGCAATCCATGAAAAT  50

seq1  CAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTATTCAATATAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTATTCAATATAGTA  100

seq1  CTTGAAGTCCTAGCCAGAGCAATTCGACAACAAAAGGAGATCCAGGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGTCCTAGCCAGAGCAATTCGACAACAAAAGGAGATCCAGGGGAT  150

seq1  AAAATTTGGAAAGGAAGAAGTCAAAATATCACTATTTGCAGATGATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGGAAAGGAAGAAGTCAAAATATCACTATTTGCAGATGATATGA  200

seq1  TAGTATTTATAAGTGACCCTAAAAATTCCAACAGAGAACTCCTAAACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTATAAGTGACCCTAAAAATTCCAACAGAGAACTCCTAAACCTG  250

seq1  ATAAACAGCTTCAGTGCAGTAGCTGGATATAAAATTAACTCAAACAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAGCTTCAGTGCAGTAGCTGGATATAAAATTAACTCAAACAAATC  300

seq1  AGTGGCCTTTCTCTACACAAAGGATAAACAGGATGAGAAAGAAATATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCTTTCTCTACACAAAGGATAAACAGGATGAGAAAGAAATATGGA  350

seq1  AACAACACCCTTCACAATAGTCACAATAATATTAAATACCTTCGTGTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACCCTTCACAATAGTCACAATAATATTAAATACCTTCGTGTTAC  400

seq1  TCTAACTACGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTACGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTGA  450

seq1  ATAAAGAAATTGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAATTGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCTCTC  500

seq1  CCTGCACTTTTACCTTGTAGGTCACAGATAGAGTTCAAATGTGTGTCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACTTTTACCTTGTAGGTCACAGATAGAGTTCAAATGTGTGTCATG  550

seq1  ATCTGCCCATGCTTGATAGCCAATAGATTTAAAGGTCAGTATGCTTAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCATGCTTGATAGCCAATAGATTTAAAGGTCAGTATGCTTAGTC  600

seq1  AATAAGTTTGAACTGTAAGCTTGCTGATGTAACCTGTACCCCTAGAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTTGAACTGTAAGCTTGCTGATGTAACCTGTACCCCTAGAAAGT  650

seq1  ATAAAAACTGCTTGTTATAGCCATTCTGGGGTTACCTTCTAGTCACTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACTGCTTGTTATAGCCATTCTGGGGTTACCTTCTAGTCACTCAC  700

seq1  CTTGAGGGACTAACTAAGGGTCAACCCCACTGTGCCAGAAAATAAAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGGACTAACTAAGGGTCAACCCCACTGTGCCAGAAAATAAAGCTC  750

seq1  TTGCTTTTGCATTGAAAAAAAAAATTGCAAAAGTTATTAAAAAACCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTGCATTGAAAAAAAAAATTGCAAAAGTTATTAAAAAACCTTTC  800

seq1  CCATCAAGTTTACTTACATTCCCATACCAGATAAAACTGTTTTCTGGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAGTTTACTTACATTCCCATACCAGATAAAACTGTTTTCTGGGTG  850

seq1  TTAGTGCATTCCAGGGGCAAAATGTTTGCTTGACAAATGCAAAAGCTCTG  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTAGTGCATTCCAGGGGCAAAATGTTTGCTTGACAAATGC-AAAGCTCTG  899

seq1  ACGTGGAACTAGTCCAGAAGAAATCAGATCCCTTCCAACTGCCTTCTATA  950
      |||||| |||||||||| |||||||||||||||||  |||| ||||||||
seq2  ACGTGG-ACTAGTCCAG-AGAAATCAGATCCCTTC--ACTG-CTTCTATA  944

seq1  GGAAACTAACTGTGCAATTGAAATTCTGCCCAAATCCAGTCAGT  994
      ||||||| ||||||||  ||||| ||||||||||| ||||||||
seq2  GGAAACT-ACTGTGCA--TGAAA-TCTGCCCAAAT-CAGTCAGT  983