BAC Information

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BAC

Clone NameB6Ng01-091L12
Chromosome7 (Build37)
Map Location 117,007,092 - 117,097,905
singlet/doubletdoublet
Overlap geneScube2, Rab6ip1
Upstream geneOlfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Phxr5
Downstream geneTmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70, EG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091L12.bB6Ng01-091L12.g
ACCDH903668DH903669
length1,151936
definitionDH903668|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L12, 5' end.DH903669|Mus musculus domesticus DNA, BAC clone: B6Ng01-091L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,007,092 - 117,008,232)(117,096,957 - 117,097,905)
sequence
gaattcagtcgctgaactaatccctagtgggcagagtccagacttcagga
tctcaggtctgcagcgctgaagaactaaaatctccctctgcatatatctt
tccagactcaacctgccactcaaataaggcagtgcctgggtagagttcta
aagcctggcaggtcccataatcagtcagcccaaaaccacagacagagaca
gcagaaagcagaactccagtccttagtctctagggaggcagggtccttga
agctctgtctggctctcctggtgagtggaatcaaaaggcagcaaagcatt
gcatttccttttccaggagccacacaaaaggacgtttggagccagagaaa
actgtaaccattcgggaaaggacccaatgtcccagccctttgaggatctg
aaaatcatttcaaaaagcaggtggcagaattcaagataggaggagtcatt
tagccaacgggagctacaaaagctaaggaggtggccgcttccccgctgcc
cacctacccactgcccaaatcacttaccctcacactgcctgccttcccct
tggtagccaggcttgcaagagcacttgtaggaagtgggtgtgttctgaca
cagtgcatcagcatggcagtcatcgagcccttgggcacactcatccacat
ctgcaaaagaacacagcaagcaccttttatgctatccacgctgtgagtga
tctctctctctctctttctctctctctctctctttctctctttctctcca
cctcccccaagcccacccctctccactcctccaaccacccccatactgct
acgacaccctgggataaaggataccatgcccaggccaatttccagatgca
cttttccaagtgaattcagccaagtaaggaaggcttgctctttactggcc
tcaagacccagttcagattgtggatgcaccttcctcttggaaagtgaagc
cacgattcccttaatgtcagtagaatgttctcaccacaaggcttccatgt
attttagcttctatcagagcacagagtatgcagggttgttccctgtccac
cctctacttgtcttctccacgtggacttgacaactgaatttagtctttga
tgcaagtcagcaccgtgcttgcatataagaaattagtagactgtctgcta
a
gaattcagtgatgaaattttgtcattactaaacttttaggcttacttctt
caaaattattgaatgaggtagacattagtagaatgtccgtattccaggtg
ttttgtgattgttgattttaaattttcaaaaaagttttatttattgtatt
tatatgagtacactgttgctctcttcagacacaccagaagagggccttgg
attccaatacagatggttgggagccaccatgtggttgctgggaattaaac
tcaggacctctggaagagcagtcagtgctcttaacctctgagccatctct
ccagctgattttaaattttttattgcatttatttttgtgtgtatgggtta
cacaatcaaagaatgtatgtggagatcagaagacaggttttgggacttga
ttctcctgccatataggttccagggatcaaattcaggtcatcataattgg
cagcaagtgccttttcatgataagctatcttgctggcctggttgttaatt
aataataataataacaacaataataataattattgttgttattattattg
atagggtttgctatgtagccttggctggcttagagctcactatgtaaagc
aagctagtttcaaactcacagagatccatctacctctgcctctcaagaaa
ggcatgtatgtgccactgtgcccagccagttgttgattttagcttgagta
tgagtctgttgaggtgcaggaccctggcttggtggacagtaagaaggtgt
cagaccctggcttggggacagtaagaagtgtcagaccctgggttggggac
agtaagagagtatcaggactctgcttgggacagtgagagagttgtcaaga
cctggcttggacagtagagggtgtcaggactctggctcaggacatgaaga
tgtcagacctggcttgggacatgagaagagtatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117007092_117008232
seq2: B6Ng01-091L12.b_47_1197

seq1  GAATTCAGTCGCTGAACTAATCCCTAGTGGGCAGAGTCCAGACTTCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCGCTGAACTAATCCCTAGTGGGCAGAGTCCAGACTTCAGGA  50

seq1  TCTCAGGTCTGCAGCGCTGAAGAACTAAAATCTCCCTCTGCATATATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTCTGCAGCGCTGAAGAACTAAAATCTCCCTCTGCATATATCTT  100

seq1  TCCAGACTCAACCTGCCACTCAAATAAGGCAGTGCCTGGGTAGAGTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACTCAACCTGCCACTCAAATAAGGCAGTGCCTGGGTAGAGTTCTA  150

seq1  AAGCCTGGCAGGTCCCATAATCAGTCAGCCCAAAACCACAGACAGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGCAGGTCCCATAATCAGTCAGCCCAAAACCACAGACAGAGACA  200

seq1  GCAGAAAGCAGAACTCCAGTCCTTAGTCTCTAGGGAGGCAGGGTCCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGCAGAACTCCAGTCCTTAGTCTCTAGGGAGGCAGGGTCCTTGA  250

seq1  AGCTCTGTCTGGCTCTCCTGGTGAGTGGAATCAAAAGGCAGCAAAGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTCTGGCTCTCCTGGTGAGTGGAATCAAAAGGCAGCAAAGCATT  300

seq1  GCATTTCCTTTTCCAGGAGCCACACAAAAGGACGTTTGGAGCCAGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCTTTTCCAGGAGCCACACAAAAGGACGTTTGGAGCCAGAGAAA  350

seq1  ACTGTAACCATTCGGGAAAGGACCCAATGTCCCAGCCCTTTGAGGATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAACCATTCGGGAAAGGACCCAATGTCCCAGCCCTTTGAGGATCTG  400

seq1  AAAATCATTTCAAAAAGCAGGTGGCAGAATTCAAGATAGGAGGAGTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATTTCAAAAAGCAGGTGGCAGAATTCAAGATAGGAGGAGTCATT  450

seq1  TAGCCAACGGGAGCTACAAAAGCTAAGGAGGTGGCCGCTTCCCCGCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAACGGGAGCTACAAAAGCTAAGGAGGTGGCCGCTTCCCCGCTGCC  500

seq1  CACCTACCCACTGCCCAAATCACTTACCCTCACACTGCCTGCCTTCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACCCACTGCCCAAATCACTTACCCTCACACTGCCTGCCTTCCCCT  550

seq1  TGGTAGCCAGGCTTGCAAGAGCACTTGTAGGAAGTGGGTGTGTTCTGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCCAGGCTTGCAAGAGCACTTGTAGGAAGTGGGTGTGTTCTGACA  600

seq1  CAGTGCATCAGCATGGCAGTCATCGAGCCCTTGGGCACACTCATCCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCATCAGCATGGCAGTCATCGAGCCCTTGGGCACACTCATCCACAT  650

seq1  CTGCAAAAGAACACAGCAAGCACCTTTTATGCTATCCACGCTGTGAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAAGAACACAGCAAGCACCTTTTATGCTATCCACGCTGTGAGTGA  700

seq1  TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCCA  750

seq1  CCTCCCCCAAGCCCACCCCTCTCCACTCCTCCAACCACCCCCATACTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCAAGCCCACCCCTCTCCACTCCTCCAACCACCCCCATACTGCT  800

seq1  ACGACACCCTGGGATAAAGGATACCATGCCCAGGCCAATTTCCAGATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACACCCTGGGATAAAGGATACCATGCCCAGGCCAATTTCCAGATGCA  850

seq1  CTCTTCCAAGTGGAATCAGCCAAGTAAGG-AGGC-TGC-CCTTACTGGCC  897
      || ||||||||| | |||||||||||||| |||| ||| | |||||||||
seq2  CTTTTCCAAGTGAATTCAGCCAAGTAAGGAAGGCTTGCTCTTTACTGGCC  900

seq1  TCCAAGACCCAGTTCAGATTGTGGATGCACC-TCCTCTTGG-AAGTG-AG  944
      | ||||||||||||||||||||||||||||| ||||||||| ||||| ||
seq2  T-CAAGACCCAGTTCAGATTGTGGATGCACCTTCCTCTTGGAAAGTGAAG  949

seq1  CCACGA-TCCCCTAATGTCAGGTAG-ATGTTCCCACCAC-AGGCTCCCAT  991
      |||||| |||| |||||||| |||| |||||| |||||| ||||| ||||
seq2  CCACGATTCCCTTAATGTCA-GTAGAATGTTCTCACCACAAGGCTTCCAT  998

seq1  GTA-TTTAGC-TCATTCAGAGCACAGAGTATGCAGGGTTG-TCCCTGTCC  1038
      ||| |||||| ||  ||||||||||||||||||||||||| |||||||||
seq2  GTATTTTAGCTTCTATCAGAGCACAGAGTATGCAGGGTTGTTCCCTGTCC  1048

seq1  ACCCTC-ACCTGTC-TCTCCACCGTGACCTGACAACTGAATTAGCTCTTT  1086
      |||||| || |||| |||||||   ||| |||||||||||||   |||||
seq2  ACCCTCTACTTGTCTTCTCCACGTGGACTTGACAACTGAATTTAGTCTTT  1098

seq1  GATGCCAAGCCAGCACCGTGCCTGGCATATAAGAATATAGTAGACTGCCT  1136
      |||| |||| |||||||||| || |||||||||||  |||||||||| ||
seq2  GATG-CAAGTCAGCACCGTG-CTTGCATATAAGAAATTAGTAGACTGTCT  1146

seq1  GCTAA  1141
      |||||
seq2  GCTAA  1151

seq1: chr7_117096957_117097905
seq2: B6Ng01-091L12.g_70_1005 (reverse)

seq1  CTGATACTC-TCTCACTGTCCCCAAGCCAGGGTCCTGACACTCTCTCACT  49
      ||||||||| ||||| ||| |||||||||||   |||||| ||| ||| |
seq2  CTGATACTCTTCTCA-TGT-CCCAAGCCAGG--TCTGACA-TCT-TCA-T  43

seq1  GTCCCTGAGCCAGAGTCCTGACACCCTCTTACTGTCCCAAGCCAGGGTCC  99
      || ||||||||||||||||||||||||| |||||| |||||||| |||| 
seq2  GT-CCTGAGCCAGAGTCCTGACACCCTC-TACTGT-CCAAGCCA-GGTCT  89

seq1  TGAC-ACTCTCTCACTGTCCCAAGCCAGGGTCCTGATACTCTCTTACTGT  148
      |||| ||||||||||||||||||| ||| |||||||||||||||||||||
seq2  TGACAACTCTCTCACTGTCCCAAG-CAGAGTCCTGATACTCTCTTACTGT  138

seq1  CCCCAACCCAGGGTCCTGACACCTTCTTACTGTCCCCAAGCCAGGGTCCT  198
      |||||||||||||| |||||| ||||||||||||||||||||||||| ||
seq2  CCCCAACCCAGGGT-CTGACA-CTTCTTACTGTCCCCAAGCCAGGGT-CT  185

seq1  GACACCTTCTTACTGTCCACCAAGCCAGGGTCCTGCACCTCAACAGACTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTTCTTACTGTCCACCAAGCCAGGGTCCTGCACCTCAACAGACTC  235

seq1  ATACTCAAGCTAAAATCAACAACTGGCTGGGCACAGTGGCACATACATGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAAGCTAAAATCAACAACTGGCTGGGCACAGTGGCACATACATGC  285

seq1  CTTTCTTGAGAGGCAGAGGTAGATGGATCTCTGTGAGTTTGAAACTAGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGAGAGGCAGAGGTAGATGGATCTCTGTGAGTTTGAAACTAGCT  335

seq1  TGCTTTACATAGTGAGCTCTAAGCCAGCCAAGGCTACATAGCAAACCCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTACATAGTGAGCTCTAAGCCAGCCAAGGCTACATAGCAAACCCTA  385

seq1  TCAATAATAATAACAACAATAATTATTATTATTGTTGTTATTATTATTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATAATAACAACAATAATTATTATTATTGTTGTTATTATTATTAT  435

seq1  TAATTAACAACCAGGCCAGCAAGATAGCTTATCATGAAAAGGCACTTGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACAACCAGGCCAGCAAGATAGCTTATCATGAAAAGGCACTTGCT  485

seq1  GCCAATTATGATGACCTGAATTTGATCCCTGGAACCTATATGGCAGGAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTATGATGACCTGAATTTGATCCCTGGAACCTATATGGCAGGAGA  535

seq1  ATCAAGTCCCAAAACCTGTCTTCTGATCTCCACATACATTCTTTGATTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTCCCAAAACCTGTCTTCTGATCTCCACATACATTCTTTGATTGT  585

seq1  GTAACCCATACACACAAAAATAAATGCAATAAAAAATTTAAAATCAGCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCATACACACAAAAATAAATGCAATAAAAAATTTAAAATCAGCTG  635

seq1  GAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTG  685

seq1  AGTTTAATTCCCAGCAACCACATGGTGGCTCCCAACCATCTGTATTGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATTCCCAGCAACCACATGGTGGCTCCCAACCATCTGTATTGGAA  735

seq1  TCCAAGGCCCTCTTCTGGTGTGTCTGAAGAGAGCAACAGTGTACTCATAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGCCCTCTTCTGGTGTGTCTGAAGAGAGCAACAGTGTACTCATAT  785

seq1  AAATACAATAAATAAAACTTTTTTGAAAATTTAAAATCAACAATCACAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATAAATAAAACTTTTTTGAAAATTTAAAATCAACAATCACAAA  835

seq1  ACACCTGGAATACGGACATTCTACTAATGTCTACCTCATTCAATAATTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGGAATACGGACATTCTACTAATGTCTACCTCATTCAATAATTTT  885

seq1  GAAGAAGTAAGCCTAAAAGTTTAGTAATGACAAAATTTCATCACTGAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGTAAGCCTAAAAGTTTAGTAATGACAAAATTTCATCACTGAATT  935

seq1  C  949
      |
seq2  C  936