BAC Information

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BAC

Clone NameB6Ng01-091M02
Chromosome7 (Build37)
Map Location 34,318,220 - 34,458,795
singlet/doubletdoublet
Overlap geneLOC627004, LOC100043398, LOC100043401, Scgb2b1
Upstream geneEG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859
Downstream geneLOC668440, Abpz, LOC100043860, LOC627079, LOC635803, Abpg, LOC100043864, LOC100043865, Abpb, Abpa, LOC100043866, LOC100043867, LOC100043868, Wtip, Sae2, LOC100043410, Pdcd2l, Gpi1, 4931406P16Rik, EG619734, Lsm14a, LOC668460, LOC668464, Kctd15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091M02.bB6Ng01-091M02.g
ACCDH903696DH903697
length1,0761,006
definitionDH903696|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M02, 5' end.DH903697|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,457,717 - 34,458,795)(34,318,220 - 34,318,841)
sequence
gaattccagaagagcattcaatctatgtgggccagaaagggaagcatccc
ccatagcatggtgatataaggggtactttttggaagggggctaagaggca
aggctgtggtaggttccctgctcctcccacctccggaaacagactcctta
ggcccatttactcatccaggagatacactggagctgttgcccctggtatt
gccattttatgccacatgaaaattttcttttgagaactcttttgtccttc
tttaggaaatgtgggctgaacagacagcaatagaggaggctgaagacagc
agagcaaagcctgaggaaggagtgtgaaggctgaccagtcagcaggttga
gctgtaaaacagactaagcaccttgctgccctgtggtagctgaaacattt
gacagggcaagggcaggagagagtggagtcatggaatgaagagagtgcag
aggcagactctgaggaaggacaaaagggatccagaagacaggacaattag
gccccattggccagaagagtactatagagctctacagactttggagacta
catcagggtctacagcctcatcacagcagagtgccagggaggctcagctt
catgtccatgctgtggaggatctgaagcacgggtaggcctcagggttcca
tgatagtgtcaggacagctcactagaggtactaatgctgtctctaccacc
tgccagctgctgtagatggtctgctgctgctgtgtattcaaaggctaagt
attgtatcccaggatctagaatcccccaccctctgattctttggtaatct
ggtaagcagattttcacatacaccaaatattgctttgtaaactgcttatc
ttaatctcagactggcttaaaaattgtagctgccagctaatactggagag
aagaggagtattctgggctgttttttttttctgggcttggggggtgtcac
aggtagggatcagaagcagagagaggagagaggagaagaaagaagatggg
gagaggggaaggctgtcataaggcctgatggcctcaagaacacgtgaaca
gagcagtggaacatgaggacaggata
gaattcttagacaaggtagagaaaggtttgtataagactattgcatatgt
atgccatgctttaccagtgcataaaccagactcagaaagatgtagacagt
ttagacctgcttctggtaacttggaaggaatttgacattgagccaggaca
aggaagtaggcttcaggcaattatttgactttgacctaggatagggaagt
aggttcagatatcttggtcatccggagaagcctctagaaacagtgatcat
gggactttgttcactgccttgcttgatccttaaatatttgtgtgtattgc
cttgttttttccttaatctaaaactgacctattactttcctgtaagtaaa
atgatatacaataaaacttgggaaaaaacaaacctgcttcagtctcagaa
ctggctggggtcatgctacactgttgtctaattttctttttactttttat
ccttgctcctgccctggagaacctgttgactgactgagctgactttgtca
gatctcatcttaacgttggagctctagtaaatgggataaagtgaaggaca
ccttgggaattggaagtgcagagaagggaagtaaagaagagttggcttag
tgatgacataaccctgtcaattgggacaagctaatggtaaaatgcctttt
ttgtgtatgcttttgctaaaacacagagaaacaatgataattctcataga
tgctcttggtctttggaccctgactagagatagtttacaccctagacata
acagagaataggtttcagaaaaacagtcctttccaattgtccagggttgg
tttgacaatgaatgtaagctgttttagagctcctctagggacagacagag
gtcatgggacatcatgatcctctctggctcctaatggaggaatgcttatt
tctggctctggttctttagataggatatctgagtccctttggcacatcta
gtactctcctctctgtctgtccttggcatgccaatctgtcatgtctttca
gttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_34457717_34458795
seq2: B6Ng01-091M02.b_45_1120 (reverse)

seq1  TATCCTGTCCTCATGGTCCACTGCTCCTGGTCACGTGTTCTTGA-GCCAT  49
      ||||||||||||||| ||||||||| ||| |||||||||||||| |||||
seq2  TATCCTGTCCTCATGTTCCACTGCT-CTGTTCACGTGTTCTTGAGGCCAT  49

seq1  CAGGCCTTATGACAGCCTTCCCCTCTCTCCATCTTCTTTCTTCTCCTCTC  99
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAGGCCTTATGACAGCCTTCCCCTCTCCCCATCTTCTTTCTTCTCCTCTC  99

seq1  TCCTCTTCTCTTGCCTTCTGATCCCTACCTGTGACACCCCCCAAGCCCAG  149
      ||||| |||||   ||||||||||||||||||||||||||||||||||||
seq2  TCCTC-TCTCT--GCTTCTGATCCCTACCTGTGACACCCCCCAAGCCCAG  146

seq1  AAAAAAAAAACAGCCCAGAATACTCCTCTTCTCTCCAGTATTAGCTGGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAGCCCAGAATACTCCTCTTCTCTCCAGTATTAGCTGGCA  196

seq1  GCTACAATTTTTAAGCCAGTCTGAGATTAAGATAAGCAGTTTACAAAGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAATTTTTAAGCCAGTCTGAGATTAAGATAAGCAGTTTACAAAGCA  246

seq1  ATATTTGGTGTATGTGAAAATCTGCTTACCAGATTACCAAAGAATCAGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGTGTATGTGAAAATCTGCTTACCAGATTACCAAAGAATCAGAG  296

seq1  GGTGGGGGATTCTAGATCCTGGGATACAATACTTAGCCTTTGAATACACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGGATTCTAGATCCTGGGATACAATACTTAGCCTTTGAATACACA  346

seq1  GCAGCAGCAGACCATCTACAGCAGCTGGCAGGTGGTAGAGACAGCATTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCAGACCATCTACAGCAGCTGGCAGGTGGTAGAGACAGCATTAG  396

seq1  TACCTCTAGTGAGCTGTCCTGACACTATCATGGAACCCTGAGGCCTACCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTAGTGAGCTGTCCTGACACTATCATGGAACCCTGAGGCCTACCC  446

seq1  GTGCTTCAGATCCTCCACAGCATGGACATGAAGCTGAGCCTCCCTGGCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAGATCCTCCACAGCATGGACATGAAGCTGAGCCTCCCTGGCAC  496

seq1  TCTGCTGTGATGAGGCTGTAGACCCTGATGTAGTCTCCAAAGTCTGTAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTGATGAGGCTGTAGACCCTGATGTAGTCTCCAAAGTCTGTAGA  546

seq1  GCTCTATAGTACTCTTCTGGCCAATGGGGCCTAATTGTCCTGTCTTCTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATAGTACTCTTCTGGCCAATGGGGCCTAATTGTCCTGTCTTCTGG  596

seq1  ATCCCTTTTGTCCTTCCTCAGAGTCTGCCTCTGCACTCTCTTCATTCCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTTTGTCCTTCCTCAGAGTCTGCCTCTGCACTCTCTTCATTCCAT  646

seq1  GACTCCACTCTCTCCTGCCCTTGCCCTGTCAAATGTTTCAGCTACCACAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCACTCTCTCCTGCCCTTGCCCTGTCAAATGTTTCAGCTACCACAG  696

seq1  GGCAGCAAGGTGCTTAGTCTGTTTTACAGCTCAACCTGCTGACTGGTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAAGGTGCTTAGTCTGTTTTACAGCTCAACCTGCTGACTGGTCAG  746

seq1  CCTTCACACTCCTTCCTCAGGCTTTGCTCTGCTGTCTTCAGCCTCCTCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACACTCCTTCCTCAGGCTTTGCTCTGCTGTCTTCAGCCTCCTCTA  796

seq1  TTGCTGTCTGTTCAGCCCACATTTCCTAAAGAAGGACAAAAGAGTTCTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTCTGTTCAGCCCACATTTCCTAAAGAAGGACAAAAGAGTTCTCA  846

seq1  AAAGAAAATTTTCATGTGGCATAAAATGGCAATACCAGGGGCAACAGCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATTTTCATGTGGCATAAAATGGCAATACCAGGGGCAACAGCTC  896

seq1  CAGTGTATCTCCTGGATGAGTAAATGGGCCTAAGGAGTCTGTTTCCGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATCTCCTGGATGAGTAAATGGGCCTAAGGAGTCTGTTTCCGGAG  946

seq1  GTGGGAGGAGCAGGGAACCTACCACAGCCTTGCCTCTTAGCCCCCTTCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGGAGCAGGGAACCTACCACAGCCTTGCCTCTTAGCCCCCTTCCA  996

seq1  AAAAGTACCCCTTATATCACCATGCTATGGGGGATGCTTCCCTTTCTGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTACCCCTTATATCACCATGCTATGGGGGATGCTTCCCTTTCTGGC  1046

seq1  CCACATAGATTGAATGCTCTTCTGGAATTC  1079
      ||||||||||||||||||||||||||||||
seq2  CCACATAGATTGAATGCTCTTCTGGAATTC  1076

seq1: chr7_34318220_34318841
seq2: B6Ng01-091M02.g_64_685

seq1  GAATTCTTAGACAAGGTAGAGAAAGGTTTGTATAAGACTATTGCATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGACAAGGTAGAGAAAGGTTTGTATAAGACTATTGCATATGT  50

seq1  ATGCCATGCTTTACCAGTGCATAAACCAGACTCAGAAAGATGTAGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATGCTTTACCAGTGCATAAACCAGACTCAGAAAGATGTAGACAGT  100

seq1  TTAGACCTGCTTCTGGTAACTTGGAAGGAATTTGACATTGAGCCAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTGCTTCTGGTAACTTGGAAGGAATTTGACATTGAGCCAGGACA  150

seq1  AGGAAGTAGGCTTCAGGCAATTATTTGACTTTGACCTAGGATAGGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTAGGCTTCAGGCAATTATTTGACTTTGACCTAGGATAGGGAAGT  200

seq1  AGGTTCAGATATCTTGGTCATCCGGAGAAGCCTCTAGAAACAGTGATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGATATCTTGGTCATCCGGAGAAGCCTCTAGAAACAGTGATCAT  250

seq1  GGGACTTTGTTCACTGCCTTGCTTGATCCTTAAATATTTGTGTGTATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTTGTTCACTGCCTTGCTTGATCCTTAAATATTTGTGTGTATTGC  300

seq1  CTTGTTTTTTCCTTAATCTAAAACTGACCTATTACTTTCCTGTAAGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTTTCCTTAATCTAAAACTGACCTATTACTTTCCTGTAAGTAAA  350

seq1  ATGATATACAATAAAACTTGGGAAAAAACAAACCTGCTTCAGTCTCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATACAATAAAACTTGGGAAAAAACAAACCTGCTTCAGTCTCAGAA  400

seq1  CTGGCTGGGGTCATGCTACACTGTTGTCTAATTTTCTTTTTACTTTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGGGTCATGCTACACTGTTGTCTAATTTTCTTTTTACTTTTTAT  450

seq1  CCTTGCTCCTGCCCTGGAGAACCTGTTGACTGACTGAGCTGACTTTGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTCCTGCCCTGGAGAACCTGTTGACTGACTGAGCTGACTTTGTCA  500

seq1  GATCTCATCTTAACGTTGGAGCTCTAGTAAATGGGATAAAGTGAAGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCATCTTAACGTTGGAGCTCTAGTAAATGGGATAAAGTGAAGGACA  550

seq1  CCTTGGGAATTGGAAGTGCAGAGAAGGGAAGTAAAGAAGAGTTGGCTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGAATTGGAAGTGCAGAGAAGGGAAGTAAAGAAGAGTTGGCTTAG  600

seq1  TGATGACATAACCCTGTCAATT  622
      ||||||||||||||||||||||
seq2  TGATGACATAACCCTGTCAATT  622