BAC Information

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BAC

Clone NameB6Ng01-091P02
Chromosome7 (Build37)
Map Location 7,629,731 - 7,788,948
singlet/doubletdoublet
Overlap geneLOC100042636, LOC665485, EG625353
Upstream geneZim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368
Downstream geneVmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091P02.bB6Ng01-091P02.g
ACCDH903838DH903839
length1,109286
definitionDH903838|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P02, 5' end.DH903839|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,787,841 - 7,788,948)(7,629,731 - 7,630,016)
sequence
gaattccaagaacaggaagcagagtcaaagacagtttctactccagctgg
tagggttcccacatgaagattctgctgcatatctgaatgtttcagtttaa
ataattggtgggttttatttggtatttattatgggttgacaaaaaatagc
tttgtacataaagcacctatgaaacagatagatatacttcccaagcgtgt
aatcaagtggttctttaaacctttctaaaattttaagcttcatatagtgg
tgatcccaacaaaaatattcagtttttacttcacaactatgattttgctg
ctgttatgaatcattttgtaaataactgatatgcaaccccaaaggggtta
cagcccacagattgagaggcactttattccaacactttggaggcaggggc
agacagatacactaagatacaaacaagcctggactacatattgtattcca
ggccaccctgggctttagagtacacatttctcaaataacaagatacagaa
actttttttattccctcagcattagcaacagagaattgaataacaagtag
ttctgctgaatgcacatttgaagataatacacagtacatgatatcacttc
ttttataagctatatatgatttcatattctaattcctttcagattactgt
gataaaatccaatgaattatttgatttatcaaagaaagcctttaatttga
tttacagtgtcagtgggttagagtgcatgcagaacagatggaacagctga
gagctctccttttggaccacaaatacaattgaaaaaaactggcaattttt
aggtataagtatgtaataactcaaatcttagtgcagtggcagatcatttc
caacaacatcagttctctttctaccttaccaaacatatctcccatctgtg
gaccaagaatacaaacataccaggttagggagtcactttcattcaaacca
ccataatacattaatctaattttcctaaatcatgaggaaactagaaattt
ccaggatactagttgagccatgatgcaacatataaattatggagacctcg
aggggagtattactatacaacccacatctagatttaaaggttttgaagca
tctgcagga
tttctatatttttgatattgttgaaagggtcttaaacttttccatcaaag
atcagagtatatttccaccacccatcattccttcattttctttctttctt
ctttcctttcctttcctttcctttcctttcctttcctttcctttcctttc
ctttccttttccttttccttttccttttccttttccttttccttttcctt
ttccttttccttttccttttccttttccttttccttttccttttcctttt
cctctcctctcctctcctcccctcccctcccctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7787841_7788948
seq2: B6Ng01-091P02.b_50_1158 (reverse)

seq1  TCCTGCAGATGCTTCAAAACCTTTAAATCTTAAGATGTGG--TGTATAGT  48
      ||||||||||||||||||||||||||||||  ||||||||  ||||||||
seq2  TCCTGCAGATGCTTCAAAACCTTTAAATCT--AGATGTGGGTTGTATAGT  48

seq1  ATTACT-CCCTCGAGGTCCTCAATATTTATATGTTGGCATCAATGGCTCA  97
      | |||| |||||||||||  ||  ||||||||||| ||||| ||||||||
seq2  AATACTCCCCTCGAGGTCTCCATAATTTATATGTT-GCATC-ATGGCTCA  96

seq1  ACCTAGTATCTTGGAAATTTCTAGTTTCCTCATGATTTAGGAAAATTAGA  147
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  A-CTAGTATCCTGGAAATTTCTAGTTTCCTCATGATTTAGGAAAATTAGA  145

seq1  TTAATGTA-TATGGTGGTTTGAATGAAAGTGACTCCCTAACCTGGTATGT  196
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTATTATGGTGGTTTGAATGAAAGTGACTCCCTAACCTGGTATGT  195

seq1  TTGTATTCTTGGTCCACAGATTGGAGATATGTTTGGTAAGGTAG-AAGAG  245
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  TTGTATTCTTGGTCCACAGATGGGAGATATGTTTGGTAAGGTAGAAAGAG  245

seq1  AACTGATGTTGTTGGAAATGATCTGCCACTGCACTAAGATTTGAGTTATT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGTTGTTGGAAATGATCTGCCACTGCACTAAGATTTGAGTTATT  295

seq1  ACATACTTATACCT-AAAATTGCCAGTTTTTTTCAATTGTATTTGTGGTC  344
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACATACTTATACCTAAAAATTGCCAGTTTTTTTCAATTGTATTTGTGGTC  345

seq1  CAAAAGGAGAGCTCTCAGCTGTTCCATCTGTTCTGCATGCACTCTAACCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGAGAGCTCTCAGCTGTTCCATCTGTTCTGCATGCACTCTAACCC  395

seq1  ACTGACACTGTAAATCAAATTAAAGGCTTTCTTTGATAAATCAAATAATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACACTGTAAATCAAATTAAAGGCTTTCTTTGATAAATCAAATAATT  445

seq1  CATTGGATTTTATCACAGTAATCTGAAAGGAATTAGAATATGAAATCATA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGATTTTATCACAGTAATCTGAAAGGAATTAGAATATGAAATCATA  495

seq1  TATAGCTTATAAAAGAAGTGATATCATGTACTGTGTATTATCTTCAAATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTATAAAAGAAGTGATATCATGTACTGTGTATTATCTTCAAATG  545

seq1  TGCATTCAGCAGAACTACTTGTTATTCAATTCTCTGTTGCTAATGCTGAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCAGCAGAACTACTTGTTATTCAATTCTCTGTTGCTAATGCTGAG  595

seq1  GGAATAAAAAAAGTTTCTGTATCTTGTTATTTGAGAAATGTGTACTCTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAAAAAAGTTTCTGTATCTTGTTATTTGAGAAATGTGTACTCTAA  645

seq1  AGCCCAGGGTGGCCTGGAATACAATATGTAGTCCAGGCTTGTTTGTATCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGGTGGCCTGGAATACAATATGTAGTCCAGGCTTGTTTGTATCT  695

seq1  TAGTGTATCTGTCTGCCCCTGCCTCCAAAGTGTTGGAATAAAGTGCCTCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTATCTGTCTGCCCCTGCCTCCAAAGTGTTGGAATAAAGTGCCTCT  745

seq1  CAATCTGTGGGCTGTAACCCCTTTGGGGTTGCATATCAGTTATTTACAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGTGGGCTGTAACCCCTTTGGGGTTGCATATCAGTTATTTACAAA  795

seq1  ATGATTCATAACAGCAGCAAAATCATAGTTGTGAAGTAAAAACTGAATAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCATAACAGCAGCAAAATCATAGTTGTGAAGTAAAAACTGAATAT  845

seq1  TTTTGTTGGGATCACCACTATATGAAGCTTAAAATTTTAGAAAGGTTTAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGGGATCACCACTATATGAAGCTTAAAATTTTAGAAAGGTTTAA  895

seq1  AGAACCACTTGATTACACGCTTGGGAAGTATATCTATCTGTTTCATAGGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCACTTGATTACACGCTTGGGAAGTATATCTATCTGTTTCATAGGT  945

seq1  GCTTTATGTACAAAGCTATTTTTTGTCAACCCATAATAAATACCAAATAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGTACAAAGCTATTTTTTGTCAACCCATAATAAATACCAAATAA  995

seq1  AACCCACCAATTATTTAAACTGAAACATTCAGATATGCAGCAGAATCTTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACCAATTATTTAAACTGAAACATTCAGATATGCAGCAGAATCTTC  1045

seq1  ATGTGGGAACCCTACCAGCTGGAGTAGAAACTGTCTTTGACTCTGCTTCC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGAACCCTACCAGCTGGAGTAGAAACTGTCTTTGACTCTGCTTCC  1095

seq1  TGTTCTTGGAATTC  1108
      ||||||||||||||
seq2  TGTTCTTGGAATTC  1109

seq1: chr7_7629731_7630016
seq2: B6Ng01-091P02.g_73_358

seq1  TTTCTATATTTTTGATATTGTTGAAAGGGTCTTAAACTTTTCCATCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATATTTTTGATATTGTTGAAAGGGTCTTAAACTTTTCCATCAAAG  50

seq1  ATCAGAGTATATTTCCACCACCCATCATTCCTTCATTTTCTTTCTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTATATTTCCACCACCCATCATTCCTTCATTTTCTTTCTTTCTT  100

seq1  CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC  150

seq1  CTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTT  200

seq1  TTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTT  250

seq1  CCTCTCCTCTCCTCTCCTCCCCTCCCCTCCCCTCCC  286
      ||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCTCCTCTCCTCCCCTCCCCTCCCCTCCC  286