BAC Information

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BAC

Clone NameB6Ng01-092A11
Chromosome7 (Build37)
Map Location 149,103,304 - 149,195,478
singlet/doubletdoublet
Overlap geneEG623757, Brsk2, 2700078K21Rik
Upstream geneNlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip
Downstream geneDusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092A11.bB6Ng01-092A11.g
ACCDH903901DH903902
length1,0091,095
definitionDH903901|Mus musculus domesticus DNA, BAC clone: B6Ng01-092A11, 5' end.DH903902|Mus musculus domesticus DNA, BAC clone: B6Ng01-092A11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,194,463 - 149,195,478)(149,103,304 - 149,104,414)
sequence
gaattccccagctccttcgagtccttggtgaagaagatctgcaagtatct
gtttcacgtgttgggccacatctactgggcccacttcaaggagaccctgg
cccttgagctgcatggacacttgaacacactgtacgtgcatttcatcctc
tttgccagagagttcaacctgcttgaccccaaagaaaccgctgtcatgga
cgacctcactgaggtgctgtgcagcagcccgggtaacagtggtgccactg
gggatggggccaacagtggagcttctggagcacagaaccacgtgaaggag
agatgagtttccagggccagatgggtgcacatgtgcaaaaagacaactgt
gtgtctgtgtgtgcgcacacatgcccgggcgtgctggtggcaaggtctga
gggccccgggctgctcagagtgtgggcttcatggatgccgctggagtcaa
ggcgtgtttcctgacttccctgttggatggatgagtgctgtttgtagtga
agagcctttggagtcattcattcattcaacaaacatttattggactgatg
ttttgatttttcttctgtggggttttcctttcttgggtcttccatgtggc
tcttgccttccccccactcccggggtggggggagctctgcggctttgaaa
ggagcaccttgtgagaggtgtctcccccttatggggcttgccctgcagat
ctggagttctgctgtgctttggggatgggctcttacagaggcctgctctg
cagctttcctccctagctcttgcctggatcttggctcagagtccctgggg
aagagaagtctgcctggggtgacccaggagggcccacacctgctgcttgc
tcctattaccccttcttgctgcctcctcagtgcccaggaggcctcaattg
tgcgtagggccagggcagccaggactggctgaggccctgtgtggagacag
gctatcagcgaaagcaaattctgccttagttcatctgttagacataataa
tcatttctc
gaattccttatacccaataacaagaaaatcaacagcttagccaaatgggc
aaaagatgtggacagaaaagagctgtgcataggggcacacacttgtaatc
ccagcactgcggaggtagcagcaggaaactcatgagttcaatgtcattct
ctgctgcctgtccttcaagctgtggataaatattccgtttagtgacttgg
tccagcttcatccaccaaagcccagatttgaacgatagcactatcatacc
tgaccacttctaacacaaaactgtccctgctttctcttgtgtctctggga
agcctcggaagtcccaccctccccagcagaattgctcctctgttttggca
cttaggtttctgaggctggtagtctcaacaacgccatgtcacagaatgag
tcagtcatgtctgccccaaatctgtgtgctgaaaccctggctcctaacac
ctcaacatgtagcagtatttggaggcaaattgaggtggtttgagtgagtg
ttgagttccccatagactctggaatttgcacacctgatgcccagttggca
ttgctgtctggggaggttcaggaggttcagccttgctgtaggaagtagcc
agtagtgttgaggctttgaggtttcaaagtatggtaccacccccaattct
ctttcacattgctatcatggactcttacccatctggaaccagaagccaaa
ataaactctctcttcattaaattgcttaggtcacagtgttttatcatagc
aacagaaaagtaaccaatgcgtgtgtaatttttttcctttatccccccct
atgcctctttgtgagccccttcagtggaggggtgttacaagaattctttc
cctggagagatgtaagcactgtctgccctgccctcatagaatacaaatga
caaaccaaagtatgagccaaccagagtccaggtggtgaacctttgagtta
aatgggctcactaatagagcacgggtgataagttcagagtgtgggtgacc
caaagcagcacctactaaaacatcttacctgtacagatatgatgatgtct
ctagccacaaaaggggtccctagtcagtcatctttttacgtatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149194463_149195478
seq2: B6Ng01-092A11.b_29_1037 (reverse)

seq1  GAGAGAATGTTTATTATGTCTGAACAGATGAACTAAAGCAGATTCTGCCT  50
      |||| |||| ||||||||||| |||||||||||||| ||||| | || ||
seq2  GAGA-AATGATTATTATGTCT-AACAGATGAACTAAGGCAGAATTTG-CT  47

seq1  TTCGCTGATAGCCCTGTCTCCACACAGGGCCTCAGCCAGTCCTGGGCTGC  100
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  TTCGCTGATAG-CCTGTCTCCACACAGGGCCTCAGCCAGTCCT-GGCTGC  95

seq1  CCTGGCCCCTACGCACAATTGGGGCCTCCTTGGGCACTGAGGAGGCAGCA  150
      ||||| ||||||||||||||| ||||||| ||||||||||||||||||||
seq2  CCTGG-CCCTACGCACAATTGAGGCCTCC-TGGGCACTGAGGAGGCAGCA  143

seq1  AGAAGGGGTAATAGGAGCAAGCAGCAGGTGTGGGCCCTCCTGGGTCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGGTAATAGGAGCAAGCAGCAGGTGTGGGCCCTCCTGGGTCACCC  193

seq1  CAGGCAGACTTCTCTACCCCAGGGACTCTGAGCCAAGATCCAGGCAAGAG  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGGCAGACTTCTCTTCCCCAGGGACTCTGAGCCAAGATCCAGGCAAGAG  243

seq1  CTAGGGAGGAAAGCTGCAGGGCAGGCCTCTGTAAGAGCCCATCCCCAAAG  300
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTAGGGAGGAAAGCTGCAGAGCAGGCCTCTGTAAGAGCCCATCCCCAAAG  293

seq1  CACAGCAGAACTCCAGATCTGCAGGGCAAGCCCCATAAGGGGGAGACACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGAACTCCAGATCTGCAGGGCAAGCCCCATAAGGGGGAGACACC  343

seq1  TCTCACAAGGTGCTCCTTTCAAAGCCGCAGAGCTCCCCCCACCCCGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAAGGTGCTCCTTTCAAAGCCGCAGAGCTCCCCCCACCCCGGGAG  393

seq1  TGGGGGGAAGGCAAGAGCCACATGGAAGACCCAAGAAAGGAAAACCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGAAGGCAAGAGCCACATGGAAGACCCAAGAAAGGAAAACCCCAC  443

seq1  AGAAGAAAAATCAAAACATCAGTCCAATAAATGTTTGTTGAATGAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAATCAAAACATCAGTCCAATAAATGTTTGTTGAATGAATGAA  493

seq1  TGACTCCAAAGGCTCTTCACTACAAACAGCACTCATCCATCCAACAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCAAAGGCTCTTCACTACAAACAGCACTCATCCATCCAACAGGGA  543

seq1  AGTCAGGAAACACGCCTTGACTCCAGCGGCATCCATGAAGCCCACACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAAACACGCCTTGACTCCAGCGGCATCCATGAAGCCCACACTCT  593

seq1  GAGCAGCCCGGGGCCCTCAGACCTTGCCACCAGCACGCCCGGGCATGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCCGGGGCCCTCAGACCTTGCCACCAGCACGCCCGGGCATGTGT  643

seq1  GCGCACACACAGACACACAGTTGTCTTTTTGCACATGTGCACCCATCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACACACAGACACACAGTTGTCTTTTTGCACATGTGCACCCATCTGG  693

seq1  CCCTGGAAACTCATCTCTCCTTCACGTGGTTCTGTGCTCCAGAAGCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAAACTCATCTCTCCTTCACGTGGTTCTGTGCTCCAGAAGCTCCA  743

seq1  CTGTTGGCCCCATCCCCAGTGGCACCACTGTTACCCGGGCTGCTGCACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGCCCCATCCCCAGTGGCACCACTGTTACCCGGGCTGCTGCACAG  793

seq1  CACCTCAGTGAGGTCGTCCATGACAGCGGTTTCTTTGGGGTCAAGCAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAGTGAGGTCGTCCATGACAGCGGTTTCTTTGGGGTCAAGCAGGT  843

seq1  TGAACTCTCTGGCAAAGAGGATGAAATGCACGTACAGTGTGTTCAAGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTCTGGCAAAGAGGATGAAATGCACGTACAGTGTGTTCAAGTGT  893

seq1  CCATGCAGCTCAAGGGCCAGGGTCTCCTTGAAGTGGGCCCAGTAGATGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCAGCTCAAGGGCCAGGGTCTCCTTGAAGTGGGCCCAGTAGATGTG  943

seq1  GCCCAACACGTGAAACAGATACTTGCAGATCTTCTTCACCAAGGACTCGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAACACGTGAAACAGATACTTGCAGATCTTCTTCACCAAGGACTCGA  993

seq1  AGGAGCTGGGGAATTC  1016
      ||||||||||||||||
seq2  AGGAGCTGGGGAATTC  1009

seq1: chr7_149103304_149104414
seq2: B6Ng01-092A11.g_69_1163

seq1  GAATTCCTTATACCCAATAACAAGAAAATCAACAGCTTAGCCAAATGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATACCCAATAACAAGAAAATCAACAGCTTAGCCAAATGGGC  50

seq1  AAAAGATGTGGACAGAAAAGAGCTGTGCATAGGGGCACACACTTGTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGTGGACAGAAAAGAGCTGTGCATAGGGGCACACACTTGTAATC  100

seq1  CCAGCACTGCGGAGGTAGCAGCAGGAAACTCATGAGTTCAATGTCATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTGCGGAGGTAGCAGCAGGAAACTCATGAGTTCAATGTCATTCT  150

seq1  CTGCTGCCTGTCCTTCAAGCTGTGGATAAATATTCCGTTTAGTGACTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCTGTCCTTCAAGCTGTGGATAAATATTCCGTTTAGTGACTTGG  200

seq1  TCCAGCTTCATCCACCAAAGCCCAGATTTGAACGATAGCACTATCATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTTCATCCACCAAAGCCCAGATTTGAACGATAGCACTATCATACC  250

seq1  TGACCACTTCTAACACAAAACTGTCCCTGCTTTCTCTTGTGTCTCTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACTTCTAACACAAAACTGTCCCTGCTTTCTCTTGTGTCTCTGGGA  300

seq1  AGCCTCGGAAGTCCCACCCTCCCCAGCAGAATTGCTCCTCTGTTTTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCGGAAGTCCCACCCTCCCCAGCAGAATTGCTCCTCTGTTTTGGCA  350

seq1  CTTAGGTTTCTGAGGCTGGTAGTCTCAACAACGCCATGTCACAGAATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTTCTGAGGCTGGTAGTCTCAACAACGCCATGTCACAGAATGAG  400

seq1  TCAGTCATGTCTGCCCCAAATCTGTGTGCTGAAACCCTGGCTCCTAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATGTCTGCCCCAAATCTGTGTGCTGAAACCCTGGCTCCTAACAC  450

seq1  CTCAACATGTAGCAGTATTTGGAGGCAAATTGAGGTGGTTTGAGTGAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACATGTAGCAGTATTTGGAGGCAAATTGAGGTGGTTTGAGTGAGTG  500

seq1  TTGAGTTCCCCATAGACTCTGGAATTTGCACACCTGATGCCCAGTTGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTCCCCATAGACTCTGGAATTTGCACACCTGATGCCCAGTTGGCA  550

seq1  TTGCTGTCTGGGGAGGTTCAGGAGGTTCAGCCTTGCTGTAGGAAGTAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTCTGGGGAGGTTCAGGAGGTTCAGCCTTGCTGTAGGAAGTAGCC  600

seq1  AGTAGTGTTGAGGCTTTGAGGTTTCAAAGTATGGTACCACCCCCAATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGTTGAGGCTTTGAGGTTTCAAAGTATGGTACCACCCCCAATTCT  650

seq1  CTTTCACATTGCTATCATGGACTCTTACCCATCTGGAACCAGAAGCCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACATTGCTATCATGGACTCTTACCCATCTGGAACCAGAAGCCAAA  700

seq1  ATAAACTCTCTCTTCATTAAATTGCTTAGGTCACAGTGTTTTATCATAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTCTCTCTTCATTAAATTGCTTAGGTCACAGTGTTTTATCATAGC  750

seq1  AACAGAAAAGTAACCAATGCGTGTGTAATTTTTTTCCTTTATCCCCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAAGTAACCAATGCGTGTGTAATTTTTTTCCTTTATCCCCCCCT  800

seq1  ATGCCTCTTTGTGAGCCCCTTCAGTGGAGGGGTGTTACAAGAATTCTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTTTGTGAGCCCCTTCAGTGGAGGGGTGTTACAAGAATTCTTTC  850

seq1  CCTGGAGAGATGTAAGCAACTGTCTGCCCTGCCCTCATAGAATACAAATG  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTGGAGAGATGTAAGC-ACTGTCTGCCCTGCCCTCATAGAATACAAATG  899

seq1  ACAAACCAAAGTATGAGCCAACCAGAGTCCAGGTTGGTGAACCTTTGAGT  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACAAACCAAAGTATGAGCCAACCAGAGTCCAGG-TGGTGAACCTTTGAGT  948

seq1  TTATTGGGCTCACTTATAGAGCACGGGTGATAAGTTCCAGGAGTGTGGGT  1000
      | | |||||||||| ||||||||||||||||||||||   ||||||||||
seq2  TAAATGGGCTCACTAATAGAGCACGGGTGATAAGTTC--AGAGTGTGGGT  996

seq1  GACCCCAAAAGCAGCCACACTACTAAAACATCTTACCCTGGTACAGATAT  1050
      |||||  ||||||| ||| ||||||||||||||||||   ||||||||||
seq2  GACCC--AAAGCAG-CAC-CTACTAAAACATCTTACC--TGTACAGATAT  1040

seq1  GATGATGTCCTCTTAGCCACAAAAAGGGGTCCTCATGTCAGTTCATCTTT  1100
      |||||||| ||| ||||||| ||||||||||| |  ||||| ||||||||
seq2  GATGATGT-CTC-TAGCCAC-AAAAGGGGTCC-CTAGTCAG-TCATCTTT  1085

seq1  TTACGGTATGT  1111
      |||| ||||||
seq2  TTAC-GTATGT  1095